Prevotella sp. oral taxon 299: HMPREF0669_01391
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Entry
HMPREF0669_01391 CDS
T02809
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0669_01391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pro03019
]
HMPREF0669_01391
03016 Transfer RNA biogenesis [BR:
pro03016
]
HMPREF0669_01391
Enzymes [BR:
pro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HMPREF0669_01391
Messenger RNA biogenesis [BR:
pro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HMPREF0669_01391
Transfer RNA biogenesis [BR:
pro03016
]
Prokaryotic type
tRNA degradation factors
HMPREF0669_01391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
DUF3226
Docking
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
EFC70411
LinkDB
All DBs
Position
549220..551451
Genome browser
AA seq
743 aa
AA seq
DB search
MNVITKKVQLSDGRFISVETGKVAKQADGSAVITMGNTVLLATVCAAKDAVPGTDFMPLQ
VDYREQYSAAGRFPGGFTKREGKASDNEILTSRLVDRALRPLFPSNYHAEVYVQVMLLSA
DGVDQPDALAGFAASAALACSDIPFDFPISEVRVARINGEYVVNPTFQQMENADMDLMVG
ATKDNILMVEGEMDEVSEQELIEALKVAHEAIKPMCDLQTELSKELGVDVKREYNHENND
EELREALRKATYDKCYAIALAGDHDKKSRGEAFDQIKEAFIEEYNNAHTDLTEDELSDKH
ALVDRYYDDVMRDSMRRCILDEGKRLDGRKPDEIRPIWCEVSTLPMPHGSALFTRGETQS
LSTCTLGSKLDEKMVDDVLDKSYQRFLLHYNFPPFSTGEAKAQRGVGRREVGHGHLAWRG
LKGQIPADFPYTVRLVSQILESNGSSSMATVCAGTLSLMDAGVPMKAPVSGIAMGLIKNP
GEEKYAVLSDILGDEDHLGDMDFKTTGTLKGITATQMDIKCDGLSFEILEKALMQAKAGR
EHILSKMTETISAPREEMKPQVPRIVSLEIPKEFIGAIIGPGGKIIQQMQEETGATITIE
EVDGVGKVQVSAPNKDSIDAALKKIKAIVAVPEIGETYDGVVRSVMPYGCFVEIMPGKDG
LLHISEIDWKRLESVEEAGIKEGDNITVKLLDIDPKTGKYKLSRRALMPKPEGYVERERR
PRREDRGERRPRREGNNDQHNNQ
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaataacaaaaaaagttcaattgtctgatggcagattcatcagcgttgagacc
gggaaagtggcaaagcaggcagacggttctgcagttatcactatgggaaatactgtactt
ctcgccactgtttgtgccgcaaaagatgcagttcccgggacagattttatgcctttgcag
gtagattatagagaacaatactcagctgcagggcgttttcctggtggttttacaaagaga
gaaggtaaagcaagcgacaatgaaattttgacttcacgtcttgtagaccgtgctcttaga
ccactattcccatcgaactatcacgcagaagtgtacgtacaagtaatgcttttatctgca
gatggtgtcgatcagccagatgctttagcaggatttgcagcttctgcagcacttgcttgc
tctgatattccattcgattttcctatttctgaagttcgagtagcacgcattaatggcgaa
tatgttgtgaacccaacattccaacaaatggaaaatgcggatatggaccttatggttggc
gcaacaaaagataatatattgatggttgaaggcgaaatggatgaggtgtctgaacaagaa
cttatcgaagcattaaaggtggctcacgaagctattaagcctatgtgcgaccttcaaaca
gagctttctaaagaactaggcgtagatgttaagcgtgaatacaatcacgaaaataacgac
gaagaattacgtgaagctcttagaaaagcaacttacgacaaatgctatgctatcgctctt
gcaggcgatcacgacaagaagagccgtggagaagcattcgatcaaatcaaagaagcattt
atcgaagaatataataatgctcatacagacttaacagaagatgagttaagcgataaacat
gcattggtagaccgctactatgacgatgtgatgagagactcaatgcgtcgttgtatccta
gacgaaggaaaacgtttagatggtagaaaaccagacgaaattcgtccaatatggtgcgaa
gtgtctacacttccaatgcctcacggaagtgctttgttcactcgtggtgaaacacagagc
ctttctacctgtacacttggtagcaagttagacgagaaaatggttgatgatgttctagat
aagagctaccaacgtttcttgttacactataacttcccaccattcagtactggagaagca
aaggcacaacgtggagttggccgtcgtgaagtaggtcacggacaccttgcttggcgtggt
ttgaaaggtcaaataccagcagatttcccttacacagtgcgtcttgtgagccaaatcctt
gaaagtaatggttcttcatctatggctactgtatgtgcaggaacattgtcattgatggac
gcaggtgtaccaatgaaagcaccagtgagcggtattgcaatgggattgattaagaatcca
ggagaagaaaagtatgctgtgttgagcgatatccttggagatgaagaccacttaggtgat
atggacttcaaaacaacaggtactttgaaaggtattaccgcaactcaaatggacattaag
tgcgacggattgagcttcgaaatacttgaaaaagcattgatgcaagctaaagctggtcgt
gaacatatcttgagtaagatgaccgaaaccatctctgctccacgtgaagagatgaaacct
caagttccaagaattgtgagcttagaaattccaaaagagtttattggcgcaataattggc
cctggtggtaagattattcaacaaatgcaagaagaaactggcgcaacaatcacaatcgaa
gaagtagacggagtgggtaaagttcaggtgagtgcacctaacaaagactctatcgatgct
gctttgaagaagattaaagctatcgttgcagtacctgaaattggtgaaacttacgatggt
gttgtacgctcagtgatgccttatggttgctttgttgaaatcatgccaggtaaagatgga
ttgttacatatctctgaaatcgactggaaacgtcttgaaagtgttgaagaagctggaatt
aaagaaggcgacaacatcaccgttaagttgttagacattgatccaaagacaggcaaatac
aaactttctcgtcgtgctttaatgccaaaaccagaaggttatgtagagcgtgaacgccgt
cctcgtcgtgaagatcgtggcgaacgtcgtcctcgtcgtgaaggaaataacgaccaacac
aacaaccaataa
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