Prevotella sp. oral taxon 299: HMPREF0669_01521
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Entry
HMPREF0669_01521 CDS
T02809
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0669_01521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pro03021
]
HMPREF0669_01521
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_01521
Enzymes [BR:
pro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0669_01521
Transcription machinery [BR:
pro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0669_01521
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0669_01521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
EFC70541
UniProt:
D3IDL7
LinkDB
All DBs
Position
701564..702556
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVVMLEANDKFGKFEFRPLEPGFGVTIGNALRRILLSSLEGFAINTIKIG
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQVVDEFENEKVSITVENTTEFKAGDMGKYLT
GFEVLNPDLVICHLDAKASMQIDITINKGRGYVPADENRQYSTDVNVLPIDSIYTPIRNV
KYSVEPYRVEQKTDYDKLVLEVTTDGSISPKDALKEAAKILIYHFMLFSDEKITLENPEQ
DSNDEFDEEVLHMRQLLKTKLVDMNLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLSELDDLLESLNLSFGTDISKYKLDRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagttgtaatgctggaggcaaacgacaag
ttcggaaagttcgagttccgtcctttagagcctggctttggtgttactattggtaacgct
ttgcgccgcatccttctttcatcacttgaaggtttcgcaattaacacaatcaaaattggt
ggtgttgagcacgaattttcttcagttcctggtgtaaaggaagatgttaccaacattatc
ttgaatttaaaacaagtaagattcaagcaagtagtagatgaattcgagaatgagaaagtt
agtatcactgtcgagaacacaacagagttcaaggctggtgatatgggtaagtatctgact
ggatttgaagtgttaaaccctgatttggtgatttgtcatttagatgccaaagcatcgatg
cagatagacattacaattaacaagggacgtggttatgttcctgctgatgaaaatcgtcaa
tacagcaccgatgtcaacgttctcccaatcgattctatctacaccccaatccgtaacgta
aaatattcggtagagccttatcgtgttgaacaaaagaccgactacgataaacttgtatta
gaagttacaacggatggttccataagtcctaaagatgcacttaaagaagcagctaagata
cttatttatcacttcatgttgttctctgatgaaaagattactcttgaaaatccagagcaa
gacagcaatgacgagttcgatgaagaagtattacatatgcgccaattattgaaaactaag
ttggttgatatgaatctttctgttcgtgcgttgaattgcttaaaggcagcagatgttgaa
acattaggcgacctagtacagttcaataagacagatcttcttaagttccgcaactttggt
aagaaatcgctttctgagcttgatgatttgctcgagagtctgaatctatcttttggaaca
gatatttcaaagtataaattagacagagaataa
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