Prevotella sp. oral taxon 299: HMPREF0669_01606
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Entry
HMPREF0669_01606 CDS
T02809
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03420
Nucleotide excision repair
pro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0669_01606
03430 Mismatch repair
HMPREF0669_01606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_01606
Enzymes [BR:
pro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0669_01606
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0669_01606
MMR (mismatch excision repair)
Other MMR factors
HMPREF0669_01606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_11
AAA_14
Motif
Other DBs
NCBI-ProteinID:
EFC70305
LinkDB
All DBs
Position
436436..438847
Genome browser
AA seq
803 aa
AA seq
DB search
MNLLNELNEKQREAVEYISGPQLVIAGAGSGKTRVLTYKIAYLIEKGFMPWSILALTFTN
KAANEMKERIATLVGEQSARQLQMGTFHSVFSRILRNEAATIGYQRNFTIYDESDSRSLI
KTIVKELQLDDKVYKPATISSRISMAKNMLISSEQYASDSELIDRDKRDNIPLTYSIYKI
YTQRCVNANCMDFDDLLMNTYRLFKEHETIRQKYANLFSYILVDEYQDTNSVQQHIVSLL
TKEKQHICVVGDDAQSIYGFRGANIDNILSFQKVYPDSKLFKLEQNYRSTQNIVQAANGL
IKYNKHQIPKDVYSMQEKGEKLVVKEAASDREEASIVCRDINKIRRNFDDEYKDFAILYR
TNSQSRSFEDELRKMQIPYVIYGGLSFYQRKEIKDVIAYFRLVVNPSDEEALKRIINYPT
RGIGNTTIQKVIDAARLHNVSLWKVISSPAKYNVSLNKGTITKLSGFVNLIRGFIELLDK
KDAFVLGMQIIKESGITADIFSSTGVEGLSRQENIQEFINSLQEFVDARKEEGEGDSIGL
PDFLQQVALLSDSDSNDDTDNKVSLMTIHASKGLEYPNIFIVGLEENIFPSPMMCDSLRK
LEEERRLLYVAITRAEKRCTITFAKNRYRFGNVEFNNRSRFVEELDKKYIEFDDNSNAFS
SLKHSSYNAMSMQNNSRMNAQNSHPVASQFMADAKPRIVGLRKPEQKVDPFSERFKQRLV
KEGGRLVKVNRLINPSNAETKVESTSTSAGNLKLGTIIEHQRFGKGKVLQLEGTGENAKA
TVEFANIGTKQLLLKFAKFTIIG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttgaatgaattaaatgaaaagcaaagagaagcggttgaatatatatcagga
ccacagcttgttattgcaggagctggatctggaaagacacgtgttctaacctataaaatt
gcctatttgatagaaaaaggctttatgccttggagtatcttggctttgactttcaccaat
aaagctgctaatgagatgaaagaaagaatagcaactctagtgggagagcagtctgcacgt
caattacaaatgggtacttttcattctgttttttcacgaattcttcgaaacgaagcagct
acaataggctatcagcgtaactttactatctatgatgaaagcgattcacgttccttaatt
aaaactatcgtgaaagaacttcaattagatgacaaagtgtataagcccgcaactatatct
tcaagaataagtatggcaaagaatatgcttatctcttcagaacaatatgcgtcggattct
gaacttattgaccgagataaaagagacaatattccattgacatacagtatatataagatt
tatactcaacgatgtgttaatgccaattgtatggattttgatgatctattaatgaacact
tatagattatttaaggagcatgaaacaatcagacaaaagtatgcaaaccttttttcttat
atcttagtagacgagtatcaagataccaattcagtgcaacaacatattgttagcttgtta
accaaagagaaacaacatatttgtgttgttggagatgatgcgcaaagtatctatggtttt
cgtggtgctaacatagataatatattgagttttcagaaagtttatcccgattcaaaactc
tttaagcttgaacaaaactatcgttcaacacagaatatcgttcaagcagcaaacggattg
attaaatataataaacatcaaatccccaaagatgtttatagcatgcaagaaaaaggggag
aagctcgtagtaaaagaagcggcatcagatagagaagaagcatctattgtttgtagagat
attaataaaatacggagaaattttgacgatgaatataaagattttgccattttatatcgc
acgaactcacagagtagatcttttgaagacgagctgagaaaaatgcaaatcccatacgtt
atttatggagggctcagcttttatcaacgaaaagagataaaagatgttattgcatatttt
agacttgttgttaatccttctgacgaagaagccttaaaaagaattattaattatcctact
cgaggtattggaaacactacaattcaaaaggttattgatgctgctcgtttacataatgta
agcctttggaaggtaatttcttcaccagcaaaatacaatgtatctcttaataagggtaca
ataacaaaactctctggatttgttaacttaataagaggatttatagagctactcgataaa
aaagatgcttttgtattaggaatgcagattatcaaagaaagtggaattactgcagacata
ttttcgagtacaggtgttgaaggtttatcacgtcaagagaatatacaagaattcattaat
agtcttcaagagtttgtagatgctcgtaaagaagaaggagagggagattcaattggattg
cctgatttcttgcaacaggttgctttattgtctgattctgattcaaacgacgatacagat
aataaagtttcattgatgacgatacatgcttcaaagggattggaatatcccaatatcttc
attgttggattggaagagaacatctttcccagtcctatgatgtgcgattctttgcgtaag
ttagaagaagaaagacgtcttttatatgttgctatcacacgagcagagaagcgttgtact
attacttttgctaaaaatagatatcgctttggtaatgtggagtttaacaatagaagtaga
tttgtagaagaattggataaaaaatatatcgaatttgatgataatagcaatgcttttagc
tcattaaagcatagctcttacaatgcaatgtcaatgcaaaataattcgagaatgaatgct
caaaatagtcatcctgtggcttctcagtttatggcagatgcaaaaccacgtattgttggc
ttacgaaaaccagaacaaaaggtcgatcctttctcagaaagatttaagcaacgcttagtg
aaagagggtggaagattggttaaggttaatcgtctgatcaatccaagtaatgctgaaaca
aaggtagaaagtacgtctacttctgcaggtaacttgaaacttgggacaataattgagcat
caacgatttggaaaaggaaaggttttacaattagaaggaacaggtgaaaatgccaaagca
acagtcgaatttgcgaatataggaaccaaacaattgctacttaagtttgccaaattcacc
atcataggttaa
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integrated database retrieval system
