Protaetiibacter sp. SSC-01: H4J02_00465
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Entry
H4J02_00465 CDS
T09940
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
proa
Protaetiibacter sp. SSC-01
Pathway
proa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
proa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4J02_00465 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proa03400
]
H4J02_00465 (xth)
Enzymes [BR:
proa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H4J02_00465 (xth)
DNA repair and recombination proteins [BR:
proa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H4J02_00465 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QNO37563
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All DBs
Position
complement(96289..97125)
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AA seq
278 aa
AA seq
DB search
MRIATWNINSIRTRHARAIDWMLREDVDVVAFQEIKCKEEQFPFEAFQDAGYEVVLHGLN
QWNGVAIAARHAIEDVEVGFPGQPGFLKGHEGPDVPIEARAIGATVEGVRLWSLYVPNGR
ALGDPHYAYKLDWLATLTADVREWLTADPDLPLALMGDFNIAPLESDVGDPSLIPGLSTH
ISPPEREAFAALEAAGLTDVVRPIRPEGYTYWDYKQLRFPRNEGLRIDFILGSHAFAERV
VDASIHREERKGDGPSDHVPVVVDLDMGDSDDDRPMIF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacctggaacatcaactcgatccgcacccgtcacgcccgcgcgatcgac
tggatgctgcgcgaagacgtcgacgtcgtcgcgttccaggagatcaagtgcaaggaggag
cagttccccttcgaggcgttccaggacgccggctacgaggtcgtgctgcacggcctcaac
cagtggaacggcgtcgcgatcgccgcgcgccacgcgatcgaagacgtcgaggtcgggttc
cccggccagccgggcttcctcaaggggcacgagggcccggatgtgccgatcgaggcccgc
gcgatcggcgccacggtcgagggtgtgcgcctgtggagcctctacgtgccgaacggacgt
gcgctcggcgacccgcactacgcctacaagctcgactggctcgcgacgctcacggccgac
gtgcgcgagtggctcaccgccgaccccgacctcccgctcgccctcatgggcgacttcaac
atcgccccgctcgagtccgacgtgggcgacccgtcgctcatcccgggcctctcgacgcac
atctcgcctcccgagcgcgaggcgttcgcggcgctcgaggcggccggcctcaccgacgtc
gtgcgccccatccgtcccgagggctacacctactgggactacaagcagctgcgcttcccg
cgcaacgaggggctgcgcatcgacttcatcctcggctcgcacgccttcgccgagcgcgtc
gtcgacgcatccatccaccgcgaggagcgcaagggcgacggtccgagcgaccacgtgccg
gtcgtggtcgacctcgacatgggcgacagcgacgacgaccgcccgatgatcttctag
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