Protaetiibacter sp. SSC-01: H4J02_06125
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Entry
H4J02_06125 CDS
T09940
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
proa
Protaetiibacter sp. SSC-01
Pathway
proa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
proa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H4J02_06125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
proa03400
]
H4J02_06125
Enzymes [BR:
proa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H4J02_06125
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H4J02_06125
DNA repair and recombination proteins [BR:
proa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H4J02_06125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7577
Zn_ribbon_TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QNO38574
UniProt:
A0A7G9XT66
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All DBs
Position
complement(1296721..1297584)
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AA seq
287 aa
AA seq
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MPELPEVHALASDLDARLRGREIARLQIVAFPALKTYDPPVESLAGERIAGVTRHGKFLD
LATDGGLHLVMHLARAGWVRWRAAAPQSSGRPGAGPLAARLVLDDGSGFDVTEAGTKKSL
ALYVVRDPAEVPGIARLGPDPLADDFTLARFREILAAQGRAQLKSVLRDQSVVAGIGNAY
SDEILHVARMSPFKPAAMGDDDSAALYEALRTTLADAVARAEGTPASELKAEKKSNLRVH
GRFREPCPVCGTRIEQVIFADRTFQYCPGCQTGGKKLSDRVMDRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtgcacgcgctggcatccgacctggatgcgcggctgcgtggt
cgcgagatcgcgcgcctgcagatcgtcgccttcccggcgctcaagacctacgacccgccg
gtcgagtcgctcgcgggcgagcggatcgccggggtgacgcgccacggcaagttcctcgac
ctcgcgaccgacggcgggctccacctcgtcatgcatctcgcacgcgcgggctgggtccgc
tggcgcgccgcggcgccgcagagttcggggcgcccgggcgcaggccccctcgcggcgcga
ctcgtgctcgacgacggatcgggcttcgacgtgaccgaggcgggcacgaagaagagcctc
gcgctttacgtcgtgcgcgaccccgcagaggtgccgggcatcgcccgcctcgggccggat
ccgctcgccgacgacttcaccctcgcgcgcttccgggagatcctcgccgcacagggccgc
gctcagctcaagagcgtgctgcgcgaccagtccgtcgtcgccggcatcggcaacgcgtac
tccgacgagatcctgcacgtcgcgcgcatgtcgccgttcaagcccgccgcaatgggcgac
gacgattcggccgcgctctacgaggcgctccgcacgacgctcgcggatgcggtggcacgc
gccgagggcacgccggcatccgagctcaaggccgagaagaagtcgaacctgcgcgtgcac
gggcgctttcgcgagccgtgccccgtgtgcggaacgcgcatcgagcaggtgatcttcgcc
gaccgcaccttccagtactgcccggggtgtcagacgggcggcaagaagctcagtgaccgc
gtgatggaccggttgctgaagtag
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