Protaetiibacter sp. SSC-01: H4J02_07285
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Entry
H4J02_07285 CDS
T09940
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
proa
Protaetiibacter sp. SSC-01
Pathway
proa03030
DNA replication
proa03410
Base excision repair
proa03420
Nucleotide excision repair
proa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4J02_07285 (polA)
03410 Base excision repair
H4J02_07285 (polA)
03420 Nucleotide excision repair
H4J02_07285 (polA)
03440 Homologous recombination
H4J02_07285 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proa03032
]
H4J02_07285 (polA)
03400 DNA repair and recombination proteins [BR:
proa03400
]
H4J02_07285 (polA)
Enzymes [BR:
proa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4J02_07285 (polA)
DNA replication proteins [BR:
proa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H4J02_07285 (polA)
DNA repair and recombination proteins [BR:
proa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H4J02_07285 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4J02_07285 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DUF2492
Motif
Other DBs
NCBI-ProteinID:
QNO38853
UniProt:
A0A7G9XTZ5
LinkDB
All DBs
Position
complement(1535544..1538186)
Genome browser
AA seq
880 aa
AA seq
DB search
MLIDGHSLAFRAFYALPVDSFVTRDGQHTNAIHGFISMLLNLLQAQKPTHLAVAFDISRY
SFRTREYAEYKGTRGETPPEFVGQVPLLEEALKAMNIRTLSKEDFEADDILATLATRGKE
QGYRVLVVSGDRDTIQLVDDDITLLYPNVRGVSELKTYDTDAVIERYGIRPEQYPEIAAL
VGETSDNLPGVDKVGEKTAVKWIQQYGTVEQLLAHADEIKGVVGQNLRDQQDRVVRNRKL
NRLVRDVELPLGPADLERQPIDPTAVRAVFDRLQFRTLLDRVFKIEGAAADAGIVEPDAD
APHAVVAPVVRTMIDEELAKWLETQSQGGAGPLGLRIATLNGQVEGFGIASLTETAWVPW
APGRPDYVALEKWLASDAPKYLHDAKRQLKTLHAAGLELGGVAGDTALAAWLLRPSTKAD
SLGGLVYYYLGETLPEPDPSQLVPETEALSPATEAWFLVRLQAELDARLDAGSLSVERDI
EVPLVPVLARMELQGVTVSADVLGELNSRLGAQAADIAQRAYAEIGREVNLGSPKQLQEV
LFDQLGMPKTRSNKTGYSTDAQALADLQEQHPHPFLALLLQHRDATKIRQIVETLQTAVG
ADNRIHTTYEQTGSATGRISSNDPNLQNIPIKTEVGREVRSAFLAGEGFETLLTADYSQI
EMRIMAHLSEDAGLIEAFRSGEDLHRFVGARIFGVAPADVTPVMRTKVKAMSYGLAYGLS
AFGLSKQLRIEVSEAKELMADYFARFGAVRDYLRGVVEQARIDGYTTTIFGRRRPFSDLS
STNRVLRENAERQALNSPIQGSAADIIKRAMLAIDAEIRAQQLDSRMLLQVHDELVFEVA
PGELERMRAIVTTGMAGAAELSVPLEVQVGTGPNWDAAAH
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
ctgctcatcgacggccattcgctggcgttccgggcgttctacgcgctcccggtcgacagc
ttcgtgacgcgcgacggtcagcacaccaacgccatccacgggttcatctcgatgctgctc
aacctgctgcaggcccagaagcccacgcacctcgcggtcgcgttcgacatctcgcgctac
tcgttccgcacgcgcgagtacgcggagtacaagggcacgcgcggcgagacaccgcccgag
ttcgtcggccaggtgccgctcctcgaggaggcgctcaaggcgatgaacatccgcacgctc
tcgaaggaggacttcgaggcggatgacatcctcgccacgctcgcgacgcgcggcaaggag
cagggctaccgagtgctcgtggtgtcgggcgaccgcgacacgatccagctcgtcgacgac
gacatcacgcttctctacccgaacgtgcggggcgtctcggagctcaagacctacgacacc
gacgcggtgatcgagcgctacggcatccgtcccgagcagtaccccgagatcgccgccctc
gtcggggagacgagcgacaacctgcccggcgtcgacaaggtcggcgagaagaccgccgtc
aagtggatccagcagtacggcaccgtcgagcagctgctcgcgcacgccgacgagatcaag
ggcgtcgtgggccagaacctgcgcgaccagcaggaccgcgtcgtgcgcaaccgcaagctc
aaccgcctcgtgcgcgacgtcgagctgccgctcggccccgccgacctcgagcgtcagccc
atcgacccgacggccgtgcgcgccgtgttcgaccgcctgcagttccgcacgctcctcgac
cgcgtcttcaagatcgagggcgcagccgcggatgcggggatcgtcgagccggatgccgac
gcgccgcacgcggtcgtcgcacccgtcgtgcgcacgatgatcgacgaagagctcgcgaag
tggctcgagacgcagtcgcagggcggcgccgggccgctcggccttcgcatcgcgacgctc
aacggccaggtcgagggtttcggcatcgcgagcctgaccgagacggcgtgggtgccgtgg
gcgcccggccgccccgactacgtcgcgctcgagaagtggctcgcatccgacgcccccaag
tacctgcacgacgccaagcgccagctcaagaccctccacgcggccggtctggagctcggc
ggggtcgcgggcgacacggccctcgccgcttggctgctccgcccgtcgaccaaggcagac
agcctcggcggcctcgtgtactactacctcggcgagacgctccccgagcccgacccgagc
cagctcgtgcccgagacggaggcgctgagccccgccaccgaggcctggttcctcgttcgc
ctgcaggcagagctcgacgcccgcctcgacgccggctcgctctcggtcgaacgcgacatc
gaggtgccgctcgttcccgtgctcgcgcgcatggagctgcagggtgtcacggtgtcggcc
gacgtgctcggcgagctcaactcgcgcctcggtgcgcaggccgccgacatcgcgcagcgc
gcctacgccgagatcggtcgcgaggtcaacctcggctcgcccaagcagctgcaggaagtg
ctattcgaccagctcggcatgccgaagacgcgctccaacaagaccggctactcgaccgac
gcgcaggcgctggccgacctgcaggagcagcacccgcatccgttcctggcgctcctgctg
cagcaccgcgacgccacgaagatccgccagatcgtcgagacgctccagaccgcggtcggc
gccgacaatcgcatccacacgacgtacgagcagaccggatcggccacgggccgcatctcg
tcgaacgacccgaacctgcagaacatccccatcaagaccgaggtcgggcgcgaggtgcgc
tcggcgttcctcgcgggcgagggcttcgagacgctgctcacggccgactactcgcagatc
gagatgcggatcatggcgcacctctccgaggacgccggactcatcgaggccttccgctcc
ggcgaggacctgcaccgcttcgtcggcgcgcgcatcttcggcgtcgcccccgcggacgtc
acgcccgtcatgcgcaccaaggtcaaggcgatgtcgtacggcctcgcctacggcctctcg
gccttcggcctcagcaagcagctgcgcatcgaggtgtccgaggccaaggagctcatggcc
gactacttcgcgcgcttcggagccgtacgcgactacctgcgcggcgtcgtcgagcaggcg
cgtatcgacggctacacgaccacgatcttcggccgtcgccggccgttctccgacctcagc
tcgacgaaccgggtgctgcgcgagaacgccgagcgtcaggcgctcaactcgcccatccag
ggttccgcggccgacatcatcaagcgcgccatgctcgcgatcgacgccgagatccgcgcc
cagcagctcgactcgcgcatgctcctgcaggtgcacgacgagctcgtgttcgaggtcgca
ccgggcgagctcgagcggatgcgggccatcgtcacgacgggcatggcgggcgccgcagag
ctctcggtgccgctcgaggtccaggtggggactggcccgaactgggacgctgcagcacac
tag
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