Protaetiibacter sp. SSC-01: H4J02_09160
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Entry
H4J02_09160 CDS
T09940
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
proa
Protaetiibacter sp. SSC-01
Pathway
proa03030
DNA replication
proa03430
Mismatch repair
proa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
proa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4J02_09160 (holA)
03430 Mismatch repair
H4J02_09160 (holA)
03440 Homologous recombination
H4J02_09160 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proa03032
]
H4J02_09160 (holA)
03400 DNA repair and recombination proteins [BR:
proa03400
]
H4J02_09160 (holA)
Enzymes [BR:
proa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4J02_09160 (holA)
DNA replication proteins [BR:
proa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H4J02_09160 (holA)
DNA repair and recombination proteins [BR:
proa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H4J02_09160 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QNO36665
LinkDB
All DBs
Position
complement(1926614..1927639)
Genome browser
AA seq
341 aa
AA seq
DB search
MAARATAAKSAKTVIPQLSWDRIEPAPVVLVTGPEELLAERAIRAVREKLRAADPSLEVS
DIDAGAYAPGELLTLASPSLFAEPRLIRVSQVEKCTDAFLEETLSYLESPADDTVLVLRH
GGGVRGKKLLDAIRGGAGRGVEVVCAELNRDDDKVAFASAEFRAAKRKATAGAVRALVSA
FTDDLAELAAACRQLVSDTDGDITEAVVDRYYAGRTEVTAFAVADAAIAGRPGEALGLMR
HALASGSDPVPMVAAFAMKVRTMAKLAGARGSSNDLARQFGLQAWQVDRARRDLQGWTDE
GLARAIEALALADAQVKGAGRDPVFALERMIGVIAARGTTR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgtgcgacagcggcgaagagcgcgaagaccgtcatcccgcagctgtcgtgg
gaccgcatcgagccggcgcccgtcgtgctcgtcacgggccccgaggagctgctcgccgag
cgcgcgatccgcgccgtgcgcgagaagctgcgcgccgccgacccgagcctcgaggtgtcc
gacatcgacgcgggcgcctatgcgccgggggagctgctcacgctcgcgagcccgtcgctc
ttcgccgagccgcgcctcatccgcgtgagccaggtcgagaagtgcaccgacgcgttcctc
gaggagacgctctcgtacctcgagtcgcccgccgacgacaccgtgctcgtgctgcgtcac
ggcggcggtgtgcgcggcaagaagctgctcgacgcgatccgcgggggagcgggccggggc
gtcgaggtcgtgtgcgccgagctcaaccgcgacgacgacaaggtcgcattcgcctcggcc
gagttccgtgctgcgaagcgaaaggccaccgccggcgccgtgcgcgcgctcgtgtccgcc
ttcaccgacgacctcgccgagctcgccgccgcgtgccgccagctcgtctccgataccgac
ggcgacatcaccgaggccgtcgtcgaccgttactacgcgggccgcaccgaggtcaccgcc
ttcgccgtcgccgacgccgcgatcgccggccgccccggcgaggcgctcggcctcatgcgg
cacgcgctcgcatccggctccgaccccgtgcccatggtcgccgcgttcgcgatgaaggtg
cgcacgatggcgaagctcgccggcgcccgcggctcgtcgaacgacctcgcgcgccagttc
ggcctgcaggcctggcaggtcgaccgagcccgccgcgacctccagggctggacggatgag
ggcctcgcccgcgcgatcgaggcgctcgccctcgccgacgcccaggtcaagggcgccggc
cgcgaccccgtcttcgcgctcgagcgcatgatcggcgtcatcgccgcccgcggcaccacc
cgctga
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