Protaetiibacter sp. SSC-01: H4J02_11695
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Entry
H4J02_11695 CDS
T09940
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
proa
Protaetiibacter sp. SSC-01
Brite
KEGG Orthology (KO) [BR:
proa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
proa03032
]
H4J02_11695 (topA)
03400 DNA repair and recombination proteins [BR:
proa03400
]
H4J02_11695 (topA)
Enzymes [BR:
proa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H4J02_11695 (topA)
DNA replication proteins [BR:
proa03032
]
Prokaryotic type
DNA Topoisomerases
H4J02_11695 (topA)
DNA repair and recombination proteins [BR:
proa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H4J02_11695 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_2
Toprim_4
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QNO37107
UniProt:
A0A7G9XNZ9
LinkDB
All DBs
Position
complement(2479085..2481805)
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AA seq
906 aa
AA seq
DB search
MPTKKLVIVESPAKARTIAQYLGDGYEVQASVGHIRDLIDTKDLPPELKKGSLGKFSVDV
DNGFEPYYVVSDSKKKTVTELKRALKEADELYLATDEDREGEAIAWHLLEVLKPKVPVKR
MVFHEITKDAIQRAEQNTREIDTALVDAQETRRILDRLYGFEISPVLWRKVGPGLSAGRV
QSAATRLVVDRERERLAFVSANYWDLTAELAAADADSSFTARLARLEGKRIAQGGDFDDA
GKLKADVVALDERAADTLVDALRADTATFTVAKLETKPYSRRPAAPFTTSTLQQEASRKL
RFSARTTMSLAQSLYENGYITYMRTDSTTLSQQAIDAARSQAVKLYGADSIPEKPRVYAS
KSKNAQEAHEAIRPSGDTFRTPAELSSQLRGDEFKLYDLIWKRTIASQMADAKGSTATVT
IAADGGEGARAEFTASGTVITFRGYQAAYEEGRDEARNAADEASAKLPPLEEGQALTVAE
LQAKGHDTTPPPRYTEASLVKALEELGIGRPSTYASIISTIIDRGYVTPRGQALVPNWIA
FSVVRLLEDHFSELVEYDFTAEMEDDLDKIASGEAARVDWLNQFYFGGGEHPGLREIVDN
LGDIDAREVNSIRIDDGITLRVGRYGPYLEVEDGSETPRRVNVPEDVAPDELTPAKAREL
IEAPIVTDRVLGENPANGKTIVVKDGRYGPYVTELEPEPEADAPAQVEGVAVDPATGEVV
DEKPKKKKATKKAAAPKPRTASLFKSMEVATIDLETALKLLELPRTVGEDPETGEPITAQ
NGRYGPYLKKGTDSRSLESEEQIFTIELPAALEIFAQPKYGARRPSSALKEFDADPTSGK
PIRIRDGRFGPYVTDGETNATIPRGETVEGVDFDRAVQLLADKRAKGPVKKKPATRAKKP
AAAKKR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacgaagaagctcgtgatcgtcgagtcgcccgcgaaggcgcgcacgatcgcgcag
tacctcggcgacggatacgaggtgcaggcctccgtcgggcacatccgcgacctcatcgac
accaaggacctgccgcccgagctcaagaagggcagcctcggcaaattctcggtcgacgtc
gacaacgggttcgagccctactacgtcgtctctgacagcaagaagaagacggtcaccgag
ctcaagcgcgcgctcaaagaagccgacgagctctacctcgcaacggatgaagaccgcgag
ggggaggccatcgcgtggcacctgctcgaggtgctcaagcccaaggtgcccgtcaagcgc
atggtgttccacgagatcaccaaggacgccatccagcgcgccgagcagaacacccgcgag
atcgacaccgccctcgtcgacgcgcaggagacccgccgcatcctcgaccgcctctacggc
ttcgagatctcgcctgtgctgtggcgcaaggtcggtccggggctctcggccggccgcgtg
cagtccgccgcgacgcgcctcgtcgtcgaccgtgagcgcgagcgcctcgcgttcgtctcg
gcgaactactgggacctcacggccgagctcgccgccgccgacgccgactcctccttcacc
gcgcgcctcgcccgattggagggcaagcgcatcgcccagggcggcgacttcgacgacgcc
ggcaagctcaaggcggatgtcgtggcgctcgacgagcgcgccgccgacaccctcgtcgac
gcgctgcgcgcggacaccgcgacgttcaccgtcgcgaagctcgagacgaagccgtactcg
cgtcgccccgccgcaccgttcacgacgtcgaccctccagcaggaggcctcgcgcaagctg
cgcttctcggcgcgcacgaccatgagcctcgcgcagtcgctctacgagaacggctacatc
acctacatgcgcaccgactcgacgacgctctcgcagcaggcgatcgacgcggcgcgctcg
caggcggtcaagctctacggcgccgactcgatccccgagaagccgcgcgtctacgcctcc
aagtcgaagaacgcgcaggaggcccacgaggccatccgcccctcgggcgacaccttccgc
acgcccgccgagctcagctcgcagctgcgcggcgacgagttcaagctctacgacctcatc
tggaagcgcaccatcgcgagccagatggccgacgcgaagggctcgaccgcgaccgtcacg
atcgccgccgacgggggcgagggcgcgcgcgcagagttcaccgcatccggaaccgtcatc
accttccgcggctaccaggccgcgtacgaggagggtcgcgacgaggcgcgcaacgccgcc
gacgaggcgagcgccaagctgccgccgctcgaggagggccaggcgctcacggtcgccgag
ctccaggccaagggccacgacacgaccccgccgccgcgctacaccgaggcgagcctcgtg
aaggcgctcgaggagctcggcatcggacgcccctcgacctacgcctcgatcatctcgacc
atcatcgaccgcggctacgtgaccccgcgtggccaggcgctcgtgcccaactggatcgcg
ttcagcgtcgtgcgcctgctcgaggaccacttcagcgagctcgtggagtacgacttcacg
gccgaaatggaagacgacctcgacaagatcgccagcggcgaggcggcgcgcgtcgactgg
ctcaaccagttctacttcggaggcggcgagcaccccggcctgcgcgagatcgtcgacaac
ctcggcgacatcgacgcccgcgaggtcaactcgatccgcatcgacgacggcatcaccctg
cgtgtcggccgctacggcccctacctcgaggtcgaggacggatccgagaccccgcgccgc
gtcaacgtgcccgaggacgtcgcccccgacgaactcacgcccgcgaaggcccgtgagctc
atcgaggcgcccatcgtgaccgaccgcgtgctcggcgagaaccccgccaacggcaagacg
atcgtcgtcaaggacggccgctacggcccgtacgtcaccgagctcgagcccgagcccgag
gcggatgcgcccgcgcaggtcgaaggcgtcgccgtcgaccccgccacgggcgaggtggtc
gacgagaagcccaagaagaagaaggcgacgaagaaggccgccgcgccgaagccgcgcacc
gcatccctcttcaagtcgatggaggtcgccacgatcgacctcgagacggcactcaagctg
ctcgagctgccgcgcaccgtgggcgaggacccggagacgggcgagcccatcacggcccag
aacggccgctacgggccgtacctcaagaagggcaccgactcgcgctcgctcgagagcgag
gagcagatcttcacgatcgagctgcccgccgcgctcgagatcttcgctcagccgaagtac
ggcgcccgtcgcccgtcgagcgcgctcaaggagttcgacgccgacccgacgagcggcaag
ccgatccgcatccgcgacggccgcttcgggccctacgtgaccgacggcgagaccaacgcg
accatcccgcgcggcgagaccgtcgagggcgtcgacttcgaccgcgccgtgcagctgctc
gccgacaagcgcgccaagggaccggtcaagaagaagcccgccacccgcgcgaagaagccc
gccgcggcgaagaagcgctga
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