Phodopus roborovskii (desert hamster): 127213360
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Entry
127213360 CDS
T08852
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127213360 (Srrm1)
03015 mRNA surveillance pathway
127213360 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127213360 (Srrm1)
03041 Spliceosome [BR:
prob03041
]
127213360 (Srrm1)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127213360 (Srrm1)
Spliceosome [BR:
prob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
127213360 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
127213360
NCBI-ProteinID:
XP_051029665
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVRTKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPTTPPPKTRHSPTPQQSNR
TRKGRVSVSPGRSSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGSKMAAADSVQQR
RQYRRQNQQSSSDSGSSSTSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPPPPPPRRRRSPTPPPRRRTPS
PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQ
RSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGA
SASPQGRQSPSPSTRPIRRVSRTPEPKKIKKPASPSPQSVRRVSSSRSVSGSPEPAAKKP
PAPPSPVQSQSPSTNWSPAVAVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKK
HKKHKKHKKEKAVAAAPAAPAAPAAVSAATTTSAQEEPVAAPEPRKETESEAEDNLDDLE
RHLREKALRSMRKAQVSPQS
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggagcaggataatcggttcagcaacaaa
cagaagaaactcctcaagcaactgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaatgggaaaaatgctcgagaa
ttcatgggagaactgtggcccctgctgttaagtgcacaagagaacatcgccgggatcccc
tctgcttttctagagttgaagaaggaagaaataaaacagcgtcaaattgaacaagaaaaa
ttggcatctctgaaaaaacaagatgaagataaagataagagggataaggaagaaaaagaa
agcagcagagagaaaagggagcggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcactctcgatct
ccccgtcacagaaccaagagccggagcccttcccctgccccagaaaagaaggagaaatct
ccagagctcccagaaccatcagtgagaacaaaagactcttcagtacaggaggccacgtct
acaagtgacatcctgaaagctcccaagcctgagcctgtaccagagcccaaagaaccttct
ccagaaaaaaattctaaaaaggaaaaggaaaagacccgaccaagatctcgatcacgctcc
aaatcacgatctcggacccgttctcgatcaccttctcatactagaccaagacgacgacat
aggtcccgatcgagatcatattctcctagaaggcggccaagcccaagaaggagaccgtct
cctcgaagaagaactccaccaagacggatgcctcctccaccaagacacaggaggagtagg
tctccagggagacgaaggaggcgttcttctgcatctttatctggaagtagctcttcgtcc
tcttcatctcgttcccggtcaccgccaaagaagcctcctaagaggacctctagcccccct
cgaaaaactcgtagattatctccttctgcaagtcctccaagacgaaggcacagaccatca
tctccaacaactccaccacccaaaactcgccattccccaaccccccagcagtcaaaccgc
acaagaaaaggtcgtgtttctgtgtctccgggaagaagttccggtaaagtgacaaaacat
aaaggtactgagaaaagagagtcaccttcaccagcacccaagcctagaaaagtggagttg
tctgagtctgaagaagacaaaggcagcaagatggctgcagccgattctgtgcagcagaga
cgtcagtatagacgacagaaccagcagtcttcatctgactctggctcctcttccacctca
gaagatgagcggcccaagagatcccatgtgaagaacggcgaggtaggcaggcggcggaga
cattctccttctcggagtgcctctccatcacctcgaaaacgccagaaagagacttcccct
cggatgcagatgggaaaacgatggcaatcgccagtgactaaaagtggtagaaggaggaga
agtccctccccaccaccagccagaaggcgacgatctccttctccagctcctcctccccct
ccccctcctcctcggcggcgtagatctcccaccccaccaccacgacgaaggactccttct
cctcccccacgccgccgttcaccttctccaagaagatactctcctcccatccagaggaga
tactctccttccccacctccaaagaggagaaccgcctcacccccacccccgcccaagcga
agggcatcaccatctccaccaccaaagcgccgagtctcccactctccacctcccaaacaa
agaagccccccagtcaccaagagacgctcgccctccttatcttcaaagcataggaagggg
tcttccccaggccgctccacccgggaggcccggtcaccacaaccaaacaaacggcattcg
ccctcaccacgtcctcgagcgcctcagacctcaagtcctccccctgttcgaagaggagca
tctgcatcgccgcaaggaaggcagtccccatctccaagtactaggcctattaggagagtc
tccagaactccggagcctaaaaagataaaaaagcccgcctcgccaagccctcagtccgta
agaagggtttcctcttcccgatctgtctctggatctcctgagccagcagctaaaaagcct
ccagcacctccttctcctgttcagtctcagtcaccctccacaaactggtcacccgcagtg
gcagtcaaaaaggctaaaagcccaacaccaagcccgtcccctgccaggaattctgatcaa
gaaggaggtggaaagaagaagaagaaaaagaaggacaagaaacacaaaaaggataagaag
cacaagaagcacaaaaaacacaagaaggagaaggctgtggctgcagcccccgcagcccct
gcagcccctgcagctgtttctgctgccacaaccacatcagcgcaggaagagcctgtggca
gccccagagcccaggaaggagactgaaagtgaagctgaagacaaccttgatgacttagaa
aggcacctgcgggaaaaggcccttcgatccatgcggaaggctcaagtgtccccacagtcc
tag
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