KEGG   Phodopus roborovskii (desert hamster): 127213435
Entry
127213435         CDS       T08852                                 
Symbol
Trim42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:prob01009]
    127213435 (Trim42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:prob04121]
    127213435 (Trim42)
Protein phosphatases and associated proteins [BR:prob01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127213435 (Trim42)
Ubiquitin system [BR:prob04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    127213435 (Trim42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N DUF386 Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 127213435
NCBI-ProteinID: XP_051029798
UniProt: A0AAU9YVS5
LinkDB
Position
Unknown
AA seq 723 aa
METAMCVCSPCCTWQRCCPRLFSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCAEN
PNCHWCCCSWANDPNCKYCCTTNTNMKCYYYESRCCRNATITFRRGRLRTIRISSKTALR
IGSSETQLEDTKSMTTSSNLVSHLTCPMCNRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPMCNRSHCMPYSHQMNLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPILCQV
CRSRHIAYKRCVTCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEDQDEKICIHHPSSRINE
YCRSDNQLLCTFCKIAFHNGHDTVSLIDACSERSAALFSAIAKFKAVRYEIDNDLMEFNI
LKSSFKADKEAKRKEIRNGFLKLRAILQEKEKIIMEQIENLEVSRQKEIEKYVDITTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEEGIQNTFRPDPQLRLHSLHCIPLDFV
ELSSAIHELFPTAPKKACSSGDSLPSQYPIHSEMMIARKVTFSTHSFGNQQIYQRSSSLL
SFSATNDKAKMGLEAFGRAQSTAPIKPTDGLYTYWSATGETQPPQNSNSFHNWYSFNDTS
VKTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELVTTPPNNVRTELCGQIRDIM
QQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQSALQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagacggctatgtgtgtttgttccccatgctgcacctggcagagatgctgtcctcgg
ctcttctcctgtctgtgctgcaagttcatcttcacctcagagcggaactgcacctgcttc
ccctgtccctacaaggatgagcggaactgccaattctgccactgcacctgcgcagagaac
cccaattgccactggtgttgctgctcctgggccaatgaccccaactgtaagtactgttgc
acaactaacaccaacatgaaatgctactactacgagagccgctgctgccgcaatgccacc
atcacattcagaaggggtcgccttcggaccatccgcatctcctccaagacagccctccgc
atagggagcagcgaaacgcagctggaagatactaagtccatgaccaccagcagcaacttg
gtgagccatctcacctgccccatgtgcaacaggctgcgcctgcactccttcatgttacca
tgcaaccacagcctgtgcgagaagtgcctgcggcagctgcaaaaacatgctgaggtcact
gagaatttcttcatcctcatctgccccatgtgcaaccgctcgcactgcatgccctacagc
caccagatgaaccttccggaaaactatctgcgcgggcgcctcaccaaacgctacatgcag
cagcatggctacctcaagtggcgctttgaccgatcctcggggcccatcctctgccaggtg
tgccgcagccgtcacattgcctacaagcgatgcgtcacctgccgcctcaacctgtgcaac
gactgcctcaaggccttccactcggatgtggccatgcaggaccatgtcttcgtggacacc
agcgccgaggaccaggacgagaagatttgcatccaccacccgtccagccgcatcaatgag
tactgccgcagcgacaaccagctgctctgcaccttctgcaagatcgctttccacaatggc
catgacacggtcagcctcatagacgcctgctccgagaggtctgcagccctcttcagcgcc
atcgccaagttcaaagcagtccggtatgaaattgataatgacctgatggaattcaacatc
ttaaaaagcagctttaaagcagacaaggaggcaaagcggaaggagatcaggaatggcttc
ctaaaactgcgagccatccttcaagagaaagagaagatcatcatggagcagatagagaat
ctggaagtgtccaggcagaaggagattgagaagtacgtggacatcactactatgaaagtg
aacgagatggacggcctgatcgcctactccaaggaagcactaaaggaaacaggacaggtg
gcattcctgcagtctgctaagatcctggtagaccagatcgaggagggcatccagaacacc
ttcagacctgaccctcagctgcggctgcactccttacactgcattcccttggattttgtt
gaactctccagtgccatccatgaactctttcccacagcacctaagaaggcttgttcctct
ggggactctcttccttcccagtatcctatccactcagaaatgatgattgccaggaaggtc
acattcagcacccacagcttcggcaaccagcagatataccaacgaagctcctccttgctg
tccttcagtgccaccaacgataaggctaagatgggtctggaggcctttgggagggcccaa
tccactgcacctatcaaacccactgatggcctctatacctactggagtgccacaggggaa
acccagcccccacagaacagcaatagcttccacaattggtactcattcaatgacacctct
gtgaagactccaggcccaattgtcatctaccagactctggtgtatccaagagctgccaag
gtttactggacatgcccaacagaagacgtggactcctttgagatggaattctatgagctc
gttaccactcctcctaacaatgttcgaacagagctctgtggacaaattcgggacatcatg
cagcagaacctggagctacacaatctgactcccaatacagagtatttgttcaaggttaga
gccatcaacgataatggtcccgggcaatggagcgacatctgcaaggtggtaacaccggat
gggcgtgggaagaaccgagctaagtggggcctgctgaagaatatccagtctgctctgcag
aagcgcttctag

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