Phodopus roborovskii (desert hamster): 127213437
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Entry
127213437 CDS
T08852
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127213437 (Chd5)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127213437 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
127213437
NCBI-ProteinID:
XP_051029799
LinkDB
All DBs
Position
Unknown
AA seq
2070 aa
AA seq
DB search
MGLPQQPDWTSQSGHVCRPPAVPPCRGRCRRHPRPAAGLALRGAVGGAARAWRVRAEAAE
SLRGRHGGVEVLGGGGAGGRHLLAETASPAARVRPAAHGLRLAPRPAGGGRPPPLPPALG
MRGPLGTEEELPRLFAEEMENEEEMSEEDDGGLEGFEDFFPAEPVSLPKKKPKKLKENKS
KVKRKKEEGSNDELSENEEDLEEKSESEGSDYSPTKKKKKKLKEKKEKKAKRKKRDEDED
DNDDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVSIATPLAISPQQVPQPLPIRK
AKTKEGKGPGVRKKSKGTKDSKKKGRGKRVAAAGLKFRFGGVSKRKKSSSSEEDEREESD
LDNASIHSSSVRSECSAALGKKSKRRRKKRRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDEEEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPEAEPGMRPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLV
KKGKKLKDDKQEKPPDTPVVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQVKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPATPIPDVQSSKGGSLAAGAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKTEKDFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLVPEGPEGKKPCEVISSDPNTPVPASPAQLPP
APLGLTDKMEAHLGYMDEKESGVPKPKKPQEIQALPIALDRAEGEDKHQNSDSKDRAREE
RMEEVEKAQGSPEHPLKEEVLSDKEPIPDKLEPSPSHSGDFRPDDSKAEEKEPMETQQNG
DREEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDYWL
LAGIVTHGYARWQDIQNDPRYTILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEE
QLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQL
EELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMHN
NSFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
atggggttgccacagcaaccagactggacgtcacaatccgggcatgtgtgccgccccccc
gccgtgccgccgtgccgcgggcgctgccgccgccaccctcggccggctgcgggactcgcg
ctgcggggcgcggtgggcggagcggcccgggcttggcgggtgcgggcagaggcggccgag
agcttgaggggtcgacacgggggggtggaggttttggggggcgggggggccggcggccgc
catcttctcgccgagaccgcctcgcccgccgcgcgggtccgtccggcagctcacgggtta
aggctggcaccgcgcccggcgggaggggggcgcccacctcccctcccccccgcactgggc
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggaggagatggag
aacgaggaggagatgtcagaagaagacgacggtggccttgaaggcttcgaggatttcttc
cctgcagagcccgtgagccttcccaagaagaagcccaagaagctgaaagagaacaagtcc
aaagtgaagcggaagaaggaggaggggagcaacgatgagctgtcagaaaatgaggaggat
ctggaagagaagtcggagagcgaaggcagcgattactcccccaccaagaagaagaaaaag
aaactgaaggagaagaaggagaagaaagccaagcggaaaaagagagatgaagatgaggat
gataatgacgatggatgcttgaaggagcccaagtcctcgggacagctcatggctgagtgg
ggccttgatgatgtcgactacctgttttcagaggaagactaccacacactgaccaactac
aaggctttcagccagttcctccggccgctcattgccaagaagaacccgaagatccccatg
tccaaaatgatgaccgtcctgggggccaagtggcgagaattcagcgccaacaacccgttt
aagggtagctcggcggcggcggctgcggcggctgtggctgccgccgtggagactgtctcc
attgctactccgttggccatcagtccccagcaggtgccccaacctctgcccatccgcaag
gccaagaccaaagagggcaaagggcctggagtgaggaagaagagcaaaggcaccaaagac
tccaagaaaaaggggaggggcaagcgcgtggcggcggcggggctcaagttccgctttgga
ggggtcagcaagaggaagaagagctcctcgagcgaggaggatgagcgtgaggaatcagat
ttggacaacgctagcatccacagctcttcggtgcgctccgagtgctctgcagctctgggc
aagaagagcaagaggaggcgcaagaagaggaggattgatgatggcgacggctatgagaca
gaccaccaggactactgtgaagtgtgccagcagggcggcgagatcattctgtgcgacacg
tgcccgagggcctaccacctggtctgcctggacccggagctggagaaggctccggagggc
aagtggagctgccctcactgcgagaaggaggggatccaatgggagccgaaggacgacgaa
gaggaagaggaggagggtggctgtgaggaggaggaggacgatcacatggagttctgccgc
gtgtgcaaggacggtggcgagctcctgtgctgcgatgcctgcccctcctcctaccatctg
cactgcctcaacccgccgctgcccgagatcccgaacggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagttcagcggatcctacactggaggtggaccgaaccc
ccagctccctttatggtggggctgccaggaccagaggcggagccaggcatgcgcccaccc
aagcctctggagggcatccctgagagggaattctttgtcaagtgggctgggctctcttac
tggcactgttcctgggtgaaggagctacagctggagctgtaccacaccgtgatgtatcgc
aactaccaaagaaagaatgatatggacgaaccgccacccttcgattacggctctggtgat
gaggacggtaagagcgagaagcggaagaacaaagaccctctctacgccaagatggaggag
cgcttctaccgctacggcatcaagccggaatggatgatggtccatcgtatcctgaaccat
agctttgacaagaagggggacgtgcattacctgatcaagtggaaggacttaccctatgac
cagtgcacctgggagattgacgacatcgacatcccctactacgacaatctgaagcaggcc
tactggggccacagggagttgatgctgggagaggatgccaggcttcccaagaggctggtc
aagaagggcaagaagctgaaggatgacaaacaagagaagccaccggacacgcccgtcgtg
gatcccacagtcaagttcgacaagcagccgtggtacatcgactccaccggagggacgctg
cacccttaccagctagagggactcaactggttacgtttctcctgggcccaggggactgac
actatcctggctgacgagatgggtttgggcaagacggtgcagaccattgtgtttctctat
tccctgtacaaggagggccactccaaggggccttacctggttagcgcgcccctgtccacc
atcatcaactgggaacgcgagtttgagatgtgggcgcctgacttttacgtggtcacctac
acgggggacaaggagagccgctctgtgatccgggagaacgagttttcctttgaggacaac
gccattcggggtgggaagaaagtattccgcatgaagaaggaagtgcaggtcaaattccat
gtgctgctcacctcctatgagctcatcaccattgaccaagccatcctgggctccattgag
tgggcctgcctcgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcttgaatagctacaagatcgactacaagctgctgctgacaggaacccccctccag
aacaacctggaagagctattccatctcctcaacttcctgactccagagaggttcaacaat
ctggaaggcttcctggaggagtttgctgacatctccaaagaagatcagatcaaaaaactg
catgacttgctggggccgcacatgctccggaggctcaaggccgacgtgttcaagaacatg
ccggccaagacagagctgatcgtccgcgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacacggaacttcgaggcactcaactccaaggggggcggcaaccaggtg
tctctgctcaacatcatgatggacctgaagaaatgctgcaaccacccgtacctcttccct
gtggccgccgtggaggctcctgtactacccaatggctcctacgatggcagctccctggtc
aagtcttcggggaaactcatgttgctgcagaagatgctcaagaagctgcgggatgaagga
catcgagtgctgatcttctcccagatgaccaagatgctggacctcttggaggacttcctg
gagtacgagggctacaagtatgagcggatcgatgggggcatcaccgggggcctccggcaa
gaggccatcgacagattcaacgctcctggggctcagcagttctgtttcttgctctcgacg
cgcgctggtggcctgggcatcaatctggccacagcggacacagtcatcatctacgactcg
gactggaacccacacaacgacatccaggcctttagccgtgctcaccgcatcgggcagaac
aagaaggtgatgatataccgctttgtgactcgggcctcggtggaggaacgcatcactcag
gtggccaagcgcaagatgatgctcacacacctggtggtgcggcctggcctgggctccaag
tcaggctcaatgaccaagcaggagctggatgacatccttaagtttggcacggaggagctc
ttcaaggatgatgtggagggcatgatgtcccagggccagaggcctgccacacccatccct
gatgtacagtcctccaaaggcggatctctggctgccggtgcaaagaaaaagcatggcagc
accccaccaggtgacaacaaagacgtggaagacagcagcgtgatccactatgacgacgcg
gccatatccaagctgctggatcggaaccaggatgccacagatgacacggagctacagaac
atgaatgagtacctgagctccttcaaggtggcacagtacgtggtccgtgaggaagatggc
gtggaggaggtggagcgggaggtgattaagcaggaggagaatgtggaccccgactactgg
gagaagctcctgcgtcaccactacgagcagcagcaggaggacttggcccgcaacctgggc
aagggcaagcgcatccgcaagcaagtcaactacaacgacgcctcacaggaggaccaggag
tggcaggatgagctctcggacaaccagtctgagtattccatcggctctgaggatgaggac
gaggactttgaggagagaccggaagggcagagtggacgacgacagtctaggaggcagctg
aagagtgacagggacaagcccctgccgcctcttctggctcgagttgggggcaatattgag
gtgctgggcttcaatgccaggcagaggaaggcttttctgaatgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgtgggaagact
gagaaggactttcgagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggca
gacggcgcagagaccttcgcagatggtgtgccccgggagggcctttccaggcagcatgtg
ctcacgcgtatcggggtcatgtcgctggttaggaagaaggttcaggagtttgagcacgtc
aacgggaagtatagcaccccagacctggtccctgaggggcccgagggcaagaagccttgt
gaggtgatctcctcggatcccaacacacccgtgcctgccagccctgcacagctcccacca
gcccccctgggcctgacagataaaatggaagctcacctgggctacatggatgaaaaggag
tcaggtgtcccgaagccaaagaagccccaggaaatccaggccctgccaattgccctggac
agagcagagggtgaagacaagcatcagaactcagacagcaaggacagagctcgggaagag
aggatggaggaggtggagaaggcccagggctctccagagcatccactgaaagaggaagtg
ctgtcagacaaggagcccatcccggacaagctggagcctagcccgagtcacagcggcgat
ttcaggccagatgactccaaggctgaggagaaggagcccatggagacacagcaaaatgga
gacagagaggaagatgaggaggggaagaaagaagacaagaatgggaaattcaaattcatg
ttcaacattgcagacggaggcttcacagagctgcacacactgtggcagaatgaggaacgg
gccgccgtgtcctcgggaaaaatctacgaaatctggcaccgacgccacgattactggctg
ctggcaggcatcgtgacgcatggctatgcccgctggcaggacattcagaatgacccacgc
tacacgatcctcaatgagccctttaaatctgagatccacaagggcaactatttggaaatg
aagaacaagtttttggcccgcagattcaagctgctggagcaggcactggtgatcgaggaa
cagctccggagggctgcgtacctcaacatgacccaggatcccaaccacccagccatggct
ctcaatgctcgcctggcagaggtggaatgccttgccgagagtcaccagcacctatccaag
gagtcccttgctgggaataagcctgccaatgctgtcctgcacaaggtcctgaaccagctg
gaggaactgctcagtgacatgaaggcggatgtgacgcgcctgccctccatgttgtcacgc
atccccccggtggcggcccgtctgcagatgtccgagcgaagcatcctgagtcgcctcacc
aaccgtgccggtgaccccaccatccagcagggcgctttcggctcctcccagatgcacaac
aacagctttgggcctaacttccggggccctggaccgggagggattgtcaactacaaccag
atgcccctggggccctatgtgactgacatctag
DBGET
integrated database retrieval system
