Phodopus roborovskii (desert hamster): 127213548
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Entry
127213548 CDS
T08852
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04120
Ubiquitin mediated proteolysis
prob04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127213548 (Ube4b)
04120 Ubiquitin mediated proteolysis
127213548 (Ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127213548 (Ube4b)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127213548 (Ube4b)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
U-box type E3
127213548 (Ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
127213548
NCBI-ProteinID:
XP_051029953
LinkDB
All DBs
Position
Unknown
AA seq
1403 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIPASAPGPSQSLGLNVHTM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEAVFSDFKDLIGQILMEVLMMSTQTRDENPFSSLTATSQPIATAARSP
DRNLALNTGSSSGTSPMFCSLGSFSASSLSSLYETSPAPSASFWSFVPVLSPSFASPSHA
APQGAVPSAPSPPSSAPQRAALSGSLSPHSSVPQRAVPSGSLSPHSSAPQRAVPSGSLSP
HSSVPQRAVPSGSLSPHTAAPQVIVPSTAHSPHRSAPQVTVSSTSLSPYTAASGTMAGSQ
PASPRYRPYTVTHPWGSSPCPTPRSSILANSPGFPARPSSPRAVPGSSSRQRPRSRGPAF
PPASPSAASRRPSSLRISPSLGASGGASNWDSYSDHFTIETCKETDMLNYLIECFDRVGI
EEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLVPYMLCRNLPY
GFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALGELCETKFGRT
HPVCSLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVEKYFSGPTITL
ENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAIVNANMKKAQMQADDR
LVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPKCRITLPNDETRINATMEDVNEWLA
ELYGDQAPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQ
WKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGLLIQLMLRILD
PAYPDVKLPLNSDVPKAFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIVMFLVVML
CNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEH
TGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLD
ESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHL
LTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIY
LQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNA
RAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQMLTESM
LEPVPELKEQIQAWMREKQSSDH
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgaaggaggcgcctggcacgacttgctggtgga
caaacctcccaaccgacgaccccacttacgtctccccagagggagaaccctccgggacct
ccgatccctgcatcagctccaggcccctcccagagtcttggtctcaatgtccacaccatg
accccagctacctcccccataggtgcagcaggagttgcccatcggagccagagcagcgaa
ggagtcagctctctcagtagctcaccgtctaacagccttgagacgcagtctcagtccctc
tcgcgttcccagagcatggatatcgatggcgtctcctgtgagaaaagtatgtcccaggtg
gacgtggattcgggaattgagaacatggaagtggatgagaatgaccgacgagagaaaagg
agcctgagcgacaaggagccttcttcaggtcctgaagtgtctgaagagcaggccttacag
ctggtctgtaagatcttccgcgtctcctggaaagaccgtgacagagatgtcatcttcctt
tcttctctctctgcacagtttaaacagaacccaaaagaagcagtgttctctgattttaag
gatctgattggccagattctaatggaagtgctgatgatgtccactcagactcgagatgaa
aacccattttccagcctgacagccacatcccagcctattgccacagcagctcggtcacct
gacagaaatctggcgctgaacaccggctccagctcgggaacgagccccatgttctgcagc
ttgggctccttcagtgccagctcgctgtctagcctctatgaaactagccctgctccttct
gccagtttctggagctttgtgcccgtgctgagtccatcctttgcctcaccttcccacgca
gctccccagggggctgtgccctcagctcccagcccccccagctcagccccccagcgggct
gcgctttctggatccctcagcccccacagctcagtcccccagcgggctgtgccttccggg
tccctcagcccccacagctcagccccccagcgggctgtgccttccgggtccctcagcccc
cacagctcagtcccccagcgggctgtgccttccgggtccctgagccctcacactgcagcc
cctcaggtgattgtaccttccacagcccacagtcctcacagatcagccccccaagtgact
gtatcttccacatccctcagcccttacaccgcagcttctggaactatggctggaagccag
cctgcatccccaaggtatcggccctacactgtcacgcacccatgggggtcttcaccttgc
cccaccccacgatcctccattctggctaactccccaggcttccctgcccgcccaagtagt
ccccgagcagtacctggcagctcctccagacagaggccccgcagcaggggccccgccttc
ccacccgcctcgcccagtgctgccagcagacgtccctcctccctgcggatctctcctagt
ttgggagcctctggtggagcgagtaactgggattcatacagtgatcatttcaccattgaa
acctgcaaggagacagacatgctgaactacctcatcgagtgttttgaccgagttggaata
gaggagaaaaaagcaccaaagatgtgcagccagccagccgtcagccagcttctgagcaac
atccgctcgcagtgcatctcccacaccgcactcgtgctccaaggctccctcacacagccc
aggtccttgcagcagccatccttccttgtgccgtatatgctgtgcaggaatctcccgtat
ggcttcattcaagaactggtgaggaccactcaccaggacgaagaggtgttcaagcagatc
ttcatccctattttacaaggcctggcgcttgctgccaaagagtgctccctcgacagtgac
tactttaaatatcccctcatggcactgggtgaactctgtgaaaccaagtttgggaggaca
caccctgtgtgcagtttggttgcctctttgcccctgtggctgccaaagtccttaagccct
ggttctggacgggagctgcagagactgtcctacttaggggccttctttagcttctcagtc
tttgcggaggatgacgcaaaggtggttgagaaatacttctcagggcccaccattaccctg
gagaacacccgcgtcgtcagccagtcactccagcattacctggagctgggacggcaagag
cttttcaagattctgcatagtattttgttaaacggtgagactcgtgaagcagctctcagt
tacatggcggccatcgtcaatgccaatatgaagaaagcccagatgcaggccgatgatcgg
ttggtgtccacagatggctttatgctgaacctcctttgggtcctgcagcaactaagtaca
aaaatcaagttagaaacagtcgaccccacgtacatattccacccgaaatgtcggattact
ctcccgaatgacgagacacgaataaatgcgacaatggaggacgtgaatgagtggctggct
gagctctatggagatcaggctccgttttctgagccaaaattccctacggagtgtttcttt
ctgaccctgcatgctcaccacctctctattctgcctagctgtcgtcgctacatccgcaga
ctccgagccatccgagagctcaatagaaccgtggaagatttgaaaaataatgaaagccaa
tggaaagattccccactggccaccagacaccgagaaatgttgaagcgctgtaaaactcag
cttaagaaactggtacggtgcaaggcctgtgctgatgctggcttacttgacgagagtttc
ctgagacgatgtctgaatttttatggccttctcattcagctgatgctgcgcatcctggac
cctgcatatcctgacgtaaaactgcctttaaattcagatgtccccaaggcatttgcagca
ttgcctgagttttatgtagaagatgttgctgaatttttattttttattgtacaatactct
cctcaggtgctttatgagccctgtactcaggacattgtcatgttcctcgttgtgatgctg
tgtaatcagaactacatccgcaacccatacctagtggccaaactggtggaggtcatgttt
atgaccaacccctctgtccagcctcggactcagaagttttttgagatgattgagaaccac
cctctctctaccaaattgctggtaccttccctcatgaagttctatacagatgtcgagcat
accggagccaccagtgagttctatgacaagttcacgattcgctatcacatcagcactatt
tttaagagcctttggcaaaacattgctcaccatggcaccttcatggaggaattcaattca
ggaaagcagttcgttcgctacatcaatatgctgataaatgacacgacctttttgctggat
gaaagcctggagtcactgaagcgcatccatgaagttcaggaagagatgaagaacaaagaa
cagtgggaccagctgcctcgggaccagcagcaggcccggcagtctcagcttgctcaagat
gagcgtgtttcgcgttcctatctcgccctggcgacagaaaccgtggacatgttccatctc
ctcaccaagcaagtccagaagccgttcctcagaccagaacttggaccccgattagcagcc
atgctgaactttaacctccagcagctgtgtggacccaagtgccgggacctgaaggtggag
aacccggagaagtacggttttgagccaaagaagctgttggaccaactgaccgatatttac
ttgcagctggactgtgctcgcttcgctaaagctatcgctgatgaccagagatcctacagc
aaggaactgtttgaagaagtcatttcaaagatgcggaaggcaggaatcaagtccaccatt
gcaatagagaagtttaagcttcttgctgagaaagtggaggaaattgtggccaagaatgcg
cgggcagagattgactacagcgatgccccggatgagtttagagaccctctgatggacacc
ctgatgactgacccagtgagactgccctctggcaccataatggaccgctccatcatcctg
cggcatctgctgaactcccccaccgaccccttcaaccgccagatgttgacagagagcatg
ctggaaccagtgccggagctgaaggagcagattcaagcatggatgagagagaaacagagc
agtgaccactaa
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integrated database retrieval system
