Phodopus roborovskii (desert hamster): 127213560
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Entry
127213560 CDS
T08852
Symbol
Exosc10
Name
(RefSeq) exosome component 10 isoform X1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127213560 (Exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127213560 (Exosc10)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
127213560 (Exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
127213560
NCBI-ProteinID:
XP_051029968
UniProt:
A0AAV0AAE0
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MAPPSPREQHSAPATSATKPDEEMVLPGFPDADSFVKFALGSVVAVTKASGGLPQFGDEY
DFYRSFPAFQAFCETQGDRLLQCMSRVMQYHGCRSNIKDRSKVTELEDKFDLLVDTNDVI
LERVGILLDEASGVNKHQQPVLPAGLQVPKTIVSSWNRKAGEYGKKAKSETFRLLHAKNI
LRPQLRFREKIDNSNTPFLPKIFVKPNARKPLPQALSKERRERPQDRPEDLDVPPALADL
IHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPQPQLYRSVEETPCHFVSSLDQLVEL
NEKLLGCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPA
IVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLARHSLDHLLRLYCGVESNKQYQ
LADWRIRPLPEEMLNYARDDTHYLLYIYDRMRLELWERGNDQPVQLQVVWQRSRDICLKK
FVKPIFTDESYLELYRKQKKHLNSQQLAAFQLLFAWRDKTARREDESYGYVLPNHMMLKI
AEELPKEPQGIIACCNPVPPLVRQQINEMHLLIQQAREMPLLKSEAAAGVKKSGPLPSAE
RLENDLFGPHDCSHAPPDNYPITPTNGSVPLEKQPSLFAEGKEGTSLDARCLLATAVITL
FSEPSAEESGKTPLTVAQKKAQGIMESFENPFRMFLPSLEHKAHISQAAKFDPSSKIYEI
SNRWKLASQVQKEPKEATTKKVAEQTASRKQAKEECAAAALEQAIPVRQQAVLENAAKKR
ERTTGDLRATEQKQEKKRLKSAKKPKHPDPTGADFSPYDYSQSDFRAFAGDSKSKPSSQF
DPNKPAPSGKKCVAAKRFKQTVGNKSMSFPAGKSDRGFRHNWPKR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcccagcccccgggagcaacattccgcgccggcgaccagcgcgaccaagcct
gacgaggagatggtgctgcctggcttccccgacgcagacagcttcgtgaagtttgcactt
ggatcagtagtggcagttaccaaggcatctggaggcctgccacagtttggcgatgagtat
gatttttaccggagttttcctgccttccaggcattttgtgaaacacaaggagacaggttg
cttcagtgcatgagtagggtaatgcaataccatgggtgtcgcagcaatatcaaggatcga
agtaaagtgactgaattggaggacaagttcgatttactagttgataccaacgatgtgatt
ttggagagagtgggtatattactggacgaagcatcgggtgtgaataaacatcagcagccc
gtcctccctgcaggactgcaggtccccaaaacaatagtgtcaagctggaaccggaaggca
ggagaatatgggaaaaaagcaaaatctgagactttccgactgctgcatgcaaaaaacatc
ctccgacctcagctcagatttcgagagaagattgataattccaacacaccatttctccct
aaaatctttgtcaagcccaatgctcggaagcccctccctcaggcgctctcaaaagaaagg
agggaacgtccacaggaccgtccagaagacctggacgtcccccctgccctggcggatctc
atccatcagcagagaacccagcaggttgagcaagacatgtttgcacatccttatcagtat
gaactggatcacttcactccacctgactctgtgcttcagaagccgcagccccagttgtac
agatctgtggaagagacaccctgccactttgtctcctctctggaccaactcgtggagctc
aacgagaagctcctgggttgtcaggaatttgcagtggacctagagcatcactcgtacaga
agcttcctaggactcacctgcctgatgcaaatttccacccggacagaagacttcatcgtt
gacaccctagagctgcgaagtgacatgtacattctcaatgagagcctcacagacccggcc
atcgttaaggttttccatggtgcagactctgacatcgagtggctacagaaagactttggg
ctctatgtggtgaacatgtttgacacacaccaggcagcacggcttctcaacctggcccgt
cactcacttgatcatctgctgaggctctactgtggtgtggagtcaaacaagcagtatcag
ctggcagactggaggatacgccctctgcccgaggaaatgctaaactatgcccgggatgac
acccattacctgctttacatctatgaccgaatgaggctggagctgtgggagagaggcaac
gaccaacctgtccaattgcaggtggtgtggcagcggagcagggacatctgcctcaagaaa
tttgtgaagcccatctttacggatgagtcctaccttgaactgtatcgaaagcagaagaag
catttgaactctcaacagctggcagcctttcagctgctgtttgcctggagggataaaaca
gctcgcagggaggacgagagctatggatatgttctgcctaatcacatgatgctgaagata
gctgaggagctgcctaaggagccgcaaggcatcatagcttgctgcaaccccgtaccacct
cttgttcggcaacagatcaatgaaatgcatcttttaatccagcaagctcgagagatgccc
ctgctcaagtctgaagctgcagctggagtgaagaagagcggaccactacctagcgccgag
agattggagaatgatctctttggaccccatgactgctcccacgcccctccagataactac
ccgatcaccccaactaatgggtctgtgccacttgagaaacagccaagtctctttgctgag
ggcaaagaagggacctctttggatgccagatgccttcttgctacagccgtcatcactctg
ttcagtgaacctagcgctgaggaaagtggaaagaccccactgacggtggcacagaaaaaa
gcccagggcataatggagtcctttgaaaacccgtttaggatgttcctgccttctctggaa
cacaaggcccacatctctcaagcagcaaagtttgatccttcttcaaaaatctatgaaatc
agcaaccgctggaagttggccagccaggtccagaaagaacctaaagaagcaaccacgaag
aaggtagctgagcaaacagcttctcggaaacaggcaaaggaggagtgtgcagctgctgcg
ttggaacaggccatcccagtgcggcagcaggctgtgctagagaatgccgctaagaagagg
gagagaaccacaggtgacctgagggccacagagcagaagcaggagaagaaaagactgaag
agcgccaagaaacccaagcacccagaccccacaggggcagatttcagcccttacgactac
agccagtcagacttcagggcttttgctggggacagcaaatccaagccctcctcccagttt
gacccaaataagccggcgccttctggcaagaaatgtgttgcagccaaaagatttaaacag
acggtgggaaacaaaagcatgtcctttccagctgggaagtcagacagaggcttcaggcac
aactggccaaagagatag
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