Phodopus roborovskii (desert hamster): 127213595
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Entry
127213595 CDS
T08852
Symbol
Slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127213595 (Slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
prob00536
]
127213595 (Slit2)
Glycosaminoglycan binding proteins [BR:
prob00536
]
Heparan sulfate / Heparin
Axon guidance molecules
127213595 (Slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
LRR_14
EGF_TEN
hEGF
EGF_DL_JAG
EGF_Teneurin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
127213595
NCBI-ProteinID:
XP_051029995
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MSSLGWQTLSLSLGLVLSILNKVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLFPE
LLFLGTAKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGTFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPASCTCSNNIVDCRGKGLTEIPTNLPE
TITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI
TELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALR
AIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSA
KEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRL
NNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHK
MFKGLENVKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTIAPGAFDTLHSLSTLN
LLANPFNCNCHLAWLGEWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNS
CSPLSRCPSECTCLDTVVRCSNKGLKFLPKGIPRDVTELYLDGNQFTLVPKELSNYKHLT
LIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVV
PEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTT
PSKKFACQGPMDITIQAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDVPIHA
CISSPCKHGGTCHLKEGENDGFWCSCADGFEGENCEVNIDDCEDNDCENNSTCVDGINNY
TCLCPPEYTAANLNEVEKGELCEEKLDFCAQDLNPCQHDSKCILTPKGFTCDCTPGYVGE
HCDIDFDDCQDNKCKNGAHCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNFDCQ
NGAQCIIRVNEPVCQCLPGYLGEKCEKLVSVNFVNKESYLQIPSAKVQPQTNITLQIATD
EDSGILLYKGDKDHIAVELYRGRVRASYDTGSHPASAIYSVETINDGNFHIVELLALDSS
LSLSVDGGSPKIITNLSKQSTLNFDSPLYVGGMPGKNNVASLRQAPGQNGTSFHGCIRNL
YINSELQDFRKVPMQTGILPGCEPCHKKVCAHGTCQPSSQSGFTCECEEGWKGPLCDQRT
NDPCLGNKCVHGTCLPINAFSYSCKCLEGHGGVLCEEEEDLFNPCQMIKCKHGKCRLSGL
GQPYCECSSGYTGDSCDREISCRGERIRDYYQKQQGYAACQTTKKVSRLECRGGCAGGQC
CGPLRSKRRKYSFECTDGSSFVEEVEKVVKCGCTRCAS
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccttggctggcaaaccctgtccctgtcgctggggttagtgttgtcgattttg
aacaaggtggcgccgcaggcgtgccctgcccagtgctcctgttcaggcagcaccgtggat
tgtcatgggctggcactgcgcagcgtacccaggaatatcccccgcaacaccgagagactg
gatctcaatggaaataacatcacaaggatcacgaagacagattttgctggtctcaggcac
ctcagagttcttcagctcatggaaaacaagatcagtactattgagaggggagcattccag
gatctgaaggagctggagagactgcgtttaaacagaaataaccttcagttgtttcctgag
ctgctatttctcgggactgcgaagctctaccggctcgatctcagcgaaaatcaaattcaa
gcaattccaaggaaagctttccgtggggcagttgacattaaaaacctgcaactggattac
aaccagatcagctgcattgaagatgggactttccgagcactgagagatctagaagtactc
actctcaacaataacaacattactagactttcagtggcaagtttcaaccatatgcctaaa
cttaggacatttcgactccattcgaacaacctgtactgtgactgtcacctggcctggctc
tcggactggcttcgccaaaggcctcgggtgggcttatacactcagtgtatgggcccatcc
cacctgaggggacataatgtagctgaggttcaaaaacgagagtttgtctgcagtggtcac
caatcattcatggctccctcctgcagtgtcctgcactgccctgcttcctgtacctgtagc
aacaatattgtagactgccgagggaaaggtctcactgagatccccacaaatctacctgag
accatcacggaaatacgtttggaacaaaactccatcaaggttatccctcccggagctttc
tcaccatataaaaagctcagaagaattgacctgagtaataatcagatctctgagcttgcc
ccagatgccttccaaggtctacgctctctgaattcacttgtcctgtatggaaataaaatc
acagagctcccaaaaagtttattcgaaggattgttttccttacagctactattattgaat
gccaacaagataaactgccttcgggtagatgcttttcaggacctgcacaacttgaacctt
ctctccttatatgacaacaagcttcagactgttgccaagggcaccttctcagctctccga
gccatccaaactatgcatttggcccagaaccctttcatttgtgactgccatctcaagtgg
ctagcagattatctccacaccaacccaatcgagaccagcggtgcccgttgcaccagccct
cgccgcctggctaacaaaagaattggacagatcaaaagcaagaaattccgttgttcagct
aaagaacagtatttcattccaggcacagaagattatcgatcaaaattaagtggggactgc
tttgcagacttggcttgtcctgaaaagtgtcgctgtgaagggaccacagtagattgctcc
aatcaaaaactcaacaaaataccagaccacattccccagtacacagcagagctgcgtctc
aataataatgaattcacagtgttagaagctacaggaatatttaagaaacttcctcagtta
cgtaaaatcaactttagcaacaataagatcactgatatcgaggagggagcctttgaaggt
gcatctggtgtgaatgaaattcttctcaccagtaaccgtttggaaaatgtccagcataag
atgttcaaaggattggaaaatgtcaaaacattgatgctaagaagtaatcgaataagctgt
gttggaaatgacagtttcatagggctcggctctgtgcgtctgctttctttatatgacaat
caaattactacaattgcaccaggggcattcgataccctccattccttatccacactgaac
ctcttggccaatcctttcaactgtaactgtcacctggcatggctgggagaatggctcaga
aagaagagaattgtaacaggaaaccctcgatgccaaaagccctacttcctcaaggaaatc
ccaatccaggatgtagccattcaggacttcacctgtgatgatggaaacgatgacaatagc
tgctctccactctcccgttgtccttcggaatgtacttgcttggatacagtagttcgatgt
agcaacaagggcttgaagttcttgcctaaaggaattccaagagatgtcacagaactgtat
ctggatgggaaccagtttacgttggtccccaaggaactctccaactacaaacatttaaca
cttatagacttaagtaacaaccgaataagcaccctttccaatcaaagcttcagcaacatg
acccagcttctcaccttaatcctcagttacaaccgtctgagatgtatccctccacgaacc
tttgatggattgaagtctcttcggttattatctctgcatggaaatgacatttctgttgtg
ccagaaggtgccttcaatgacctctcagccttatcacacttagcgattggagccaaccct
ctttactgtgattgtaacatgcagtggttgtccgactgggtgaagtcggaatataaggaa
cctggaattgctcgctgtgctggccctggagaaatggcagataaattgttactcacaact
ccctccaaaaaatttgcatgtcaaggtcccatggatattactattcaagccaagtgtaac
ccttgtttatcaaatccatgtaaaaatgatggcacctgtaacaatgacccagttgacttt
tatcgatgcacctgtccatatggtttcaaggggcaagactgtgatgttcccatccacgcc
tgtatcagtagcccatgtaaacatggaggaacttgccatttaaaagaaggagagaatgat
ggattctggtgtagttgtgctgatgggtttgaaggggaaaactgtgaagtcaatattgac
gattgtgaagataatgactgtgaaaataattctacctgtgttgatggaattaacaactac
acatgcctttgtccaccagaatacacagctgctaatctgaatgaggtggaaaaaggcgag
ctgtgtgaggaaaagctggacttctgtgcccaggacttgaacccctgccagcatgactcc
aagtgcatcctgacaccgaagggattcacgtgtgactgcactccaggatacgttggtgag
cactgtgacattgacttcgacgactgccaagacaacaagtgcaaaaacggcgctcactgc
actgacgcagtgaacggttatacgtgcatctgccctgaaggctacagcggcttgttctgt
gagttctctccacccatggtcctccctcgcaccagcccctgtgataactttgattgtcag
aacggagctcagtgcatcatcagggtgaatgaaccggtgtgccagtgtttgcctggctac
ctgggagagaagtgtgaaaaactggtcagtgtgaattttgtgaacaaagagtcctatctt
cagatcccttcagccaaggttcagcctcagacgaacatcacacttcagattgccacagat
gaagacagcggcatcctcctgtataagggtgacaaagaccacattgctgtggaactctat
cgagggcgagttcgagccagctatgacaccggctctcacccggcttcggccatttacagt
gtggagacaatcaatgatggaaacttccacattgtggagctactggccctggattcgagt
ctctccctctccgtggatggaggaagccctaaaatcatcaccaacttgtcaaagcagtct
actctgaattttgactccccgctttatgtaggaggcatgcctgggaaaaataacgtggcg
tcactgcgccaggcccctggacagaacggcaccagcttccatggctgtatccggaacctt
tacatcaacagtgagctgcaagacttccggaaggtgcccatgcaaaccggaattctgcct
ggctgtgaaccgtgccacaagaaagtatgtgcccatggcacgtgccagcctagcagccaa
tcaggcttcacctgtgaatgtgaggaagggtggaaggggcccctctgtgaccagcgaacc
aacgacccctgcctgggaaacaaatgtgtacatggcacctgcttgcccatcaatgccttc
tcctacagctgtaagtgcctggagggccatgggggtgtcctttgtgaagaagaagaagat
ctgtttaacccctgccagatgatcaaatgcaagcatgggaagtgtcggctctctggactg
gggcagccctactgtgaatgcagcagtggatacaccggagacagctgtgatagagaaatt
tcttgccgcggggaaaggataagagattattaccaaaagcagcagggttatgctgcctgc
caaacaacaaagaaagtgtcccgcttggaatgtagaggtgggtgtgctggcgggcagtgc
tgtggacctctgaggagcaagaggcggaaatactccttcgagtgcacagacggatcctca
tttgtggaagaggttgagaaggtggtgaagtgtggctgcacgagatgtgcctcctaa
DBGET
integrated database retrieval system
