Phodopus roborovskii (desert hamster): 127213634
Help
Entry
127213634 CDS
T08852
Symbol
Dhx15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127213634 (Dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127213634 (Dhx15)
03009 Ribosome biogenesis [BR:
prob03009
]
127213634 (Dhx15)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127213634 (Dhx15)
Spliceosome [BR:
prob03041
]
Complex A
U2 snRNP components
U2 related factors
127213634 (Dhx15)
Complex B
127213634 (Dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127213634 (Dhx15)
Ribosome biogenesis [BR:
prob03009
]
Eukaryotic type
90S particles
Helicases
127213634 (Dhx15)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
127213634
NCBI-ProteinID:
XP_051030051
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSAHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcatcggttggacctgggcgaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggatagagaccgggacagagaagaccgatctaaagatcgt
gaccgagaacgtgatagaggagatagagaacgggagagggagaaagaaaaggaaaaggaa
ttgagagcgtccaccaacgctatgctcatcagtgctggattgccacctctaaaagcttct
cattcagctcactcaacccactcggctcattcaacacattctgcacactctgcccattca
acacacaccgggcatgcaggacacacgtcacttccacagtgcatcaatccgttcaccaac
ctgccccatacgcctcggtattacgatattctaaagaaacggcttcagctccctgtttgg
gaatacaaggataggtttacagatattcttgtgagacatcagtcatttgtactggttggt
gagactgggtctggcaagacaacacagataccacagtggtgtgtggagtatatgcgatca
ttgcctggacccaaaagaggagttgcctgtacacagcccagaagagtggctgcaatgagt
gtggctcagagagtcgctgatgagatggatgtaatgttaggccaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatggtatg
ctactgcgagaagctatgaacgatcccctcctggaacgttatggtgtgataattcttgat
gaggctcatgaaagaacattggctacagatattctcatgggtgttttgaaggaagttgta
agacagagatcagatttaaaggttatagtcatgagtgctaccctagacgctgggaaattc
cagatttactttgataactgtcctctcttaactatccctggccggacacaccctgttgag
attttttatactccagaaccagagagagattatcttgaagcagcaattcgaactgtgatc
cagatacatatgtgtgaagaggaagagggagaccttctcctttttttgactggccaagag
gaaattgatgaggcctgtaagagaataaagcgtgaggttgatgacttgggccctgaagtt
ggagatattaaaatcattccattgtactctacacttccaccccagcagcagcaacgcatt
tttgagccaccacctccaaaaaaacaaaatggagcaattggaagaaaggtggttgtatca
actaacattgcagagacctctttgacaatagatggtgtggtgtttgtgattgaccctgga
tttgcaaagcaaaaggtatataatcctagaatcagagttgagtctcttttggtgacagca
attagtaaagcctcagctcagcaaagagccggtcgagctggacgtaccagacctgggaaa
tgcttccggctttacacagagaaagcttataaaacagagatgcaggataatacctatcct
gagattttacgctctaatttaggatcagttgtattgcaattgaagaagcttggtattgat
gatttggtacattttgattttatggacccaccagctcccgaaactctgatgagagcccta
gaacttttgaattatttggctgctttaaatgatgatggagacctgactgaattgggatcc
atgatggcagagttccctctagacccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggttctgtctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtccctgatgtctgcagacaatgta
cgccagcagctatcaagaattatggacagatttaatttgcctcgtcgaagtactgatttt
acaagcagggactattatattaatataaggaaagcgttggttactgggtattttatgcag
gttgcgcatttagaacgaacagggcattacctaactgtgaaagataaccaggtggtccag
ttgcatccctccactgtgcttgaccacaagcccgaatgggtgctctataatgagtttgtg
ctgacgacaaagaattacatccggacgtgtacagacatcaagcccgaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaggcaaagagacagttg
gaccgcattattgccaagcttcaatccaaggaatattcacagtactga
DBGET
integrated database retrieval system