Phodopus roborovskii (desert hamster): 127213664
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Entry
127213664 CDS
T08852
Symbol
Shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
127213664 (Shank1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
127213664
NCBI-ProteinID:
XP_051030078
UniProt:
A0AAV0AEZ7
LinkDB
All DBs
Position
Unknown
AA seq
2163 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPQGTRGRGSGAPGNLASARGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGASKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGTPGSGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGTPGPTSGPQGQSQPPAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGRQESRSDKAKRLFRHYTVGSYDSFDAPSLIDGIDSGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVARNPDMDEAAHKKASQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKIEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFATESNFDPHHRSQPSYDRPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGG
PFNPGSGGPLPASSPSSFDGPSPPDTRSGGREKSLYHSGALPPAHHHPPHHHHHHAPPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTSGAPSPSHHSSSGG
SSGPTQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGSLPPASSPT
SPALPRPEPPPAGPPEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPDGAGGGGS
SPSPAPATSPVPPSPSPVPTPGSPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTL
FLSTDAGDEDGGDGGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESGGSSAGYGAYAAG
SRAYGGSGSSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGAPQP
PPRPPSPRYDAPPPTLHHHSPHSPHARHEPVLRLWGDPARRELGYRAGLGSQEKALPASP
PAARRSLLHRLPPTAPGVGPLLLQLGPEPPTPLPGVSKPWRTAAPEEPERLPLHVRFLEN
CQARPPAAGTRGSSTEDGPGMPPPSPRRVLPASPTSPRGSEENGLPLLVLPPPAPSVDVD
DGEFLFAEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPSPATPLPAAPPPAVAAAPPTL
DSTASSLTSYDSEVATLTQGAPAAPGDTPAPGPPAPAAPAPPAPQPGPDPPPGTDSGIEE
VDSRSSSDHPLETISSASTLSSLSAEGGGNTGGVAGSGAGVTSGTELLDTYVAYLDGQAF
GGSGTPGPPYPPQLMTPSKLRGRALGAGGNLRPGPGGGLRDPVTPTSPTVSVTGAGTDGL
LALSACSGPSTAGVAGAPGAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLSQ
PQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSTDSHHGGTSYIPERTS
SLQRQRLSEDSQTSLLSKPSSSIFQNWPKSPLPPLPTGSGVSSTAAAPGATSPSASSASA
STRHLQGVEFEMRSPLLRRAPSPSLLPASDHKVSPAPRPSSLPILPSGPLYPGLFDIRSS
PTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFW
TKFDVADWLEWLGLSEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFF
LER
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcggaatccgacagctccccagacgggccagggagaggcccccaggggact
cggggccggggcagcggagcacctggtaacctggcctctgcccgaggcctccagggacgc
tccatgtctgtcccagacgacgcccacttcagcatgatggttttcaggattggcatcccc
gacttgcaccagacgaaatgcctacgcttcaaccctgacgccaccatctggacagccaaa
cagcaagtactctgtgccctgagtgagagcctacaggatgtgcttaactacggactgttc
cagcctgccacctcaggccgggacgccaacttcctggaagaggagaggctgctaagagaa
tacccccagtcatttgagaagggggtaccctacctggagttccgctacaagacccgagtc
tataaacagaccaacctggatgagaaacagctggccaaactgcacacaaagacggggttg
aagaagttcctggaatatgtgcagctcgggacgtctgacaaggtggcgaggctgctggac
aaggggctggaccccaattaccatgactcagattcaggagagacacctttgaccctggcg
gcccagactgaaggttcagtagaggtgattcgaacgctgtgcctgggtggggctcacata
gacttcagggcccgggatggcatgacagcgctacacaaggctgcgtgtgctcggcactgc
ctggcactcacggcacttctggaccttgggggctcccccaactacaaggaccgccgaggg
ctgacccccctgttccacacagctatggtggggggcgacccccgctgctgcgagctactt
ctgtacaacagggcccagctgggcattgcggatgagaacggctggcaggaaatccaccag
gcctgccaaaggggccactctcagcacctagaacacctgctcttctatggggctgagcct
ggagcccagaatgcctcaggaaacacagccctgcacatctgtgctctctacaacaaggag
acctgtgccaggatcctcctttatcgtggagcaagcaaggatgtgaaaaataataacgga
cagacacccttccaggtggctgtgattgctgggaattttgagcttggggagctgatccgg
aaccatcgggagcaggatgtggtgcccttccaggagtcccccaagtatgcagcccggcgt
cgggggaccccaggctcagggctgactgtacctccagcgctgctgcgggctaacagcgac
acaagcatggcgctgcccgattggatggtgttttcagccccaggggccgcatcctctggg
acccctggccctacctcaggaccccagggccagtcacagcccccagcccccagcactaag
ctcagcagcggaaccctccgaagtgccagcagcccccgaggtgcccgggcacgctcccca
tcccgagggagacatcctgaagatgccaagagacagcctcgaggccggcccagctccagc
gggacaccccgagaagggccagctgggggaactgggggctcagggggccctgggggctcc
ctgggcagcagaggcagacgtaggaagctctattcagcggtacccggacgctccttcatg
gccgtgaagtcataccaggcgcaaggagagggggagatctctctgagtaaaggcgagaag
atcaaagtgctcagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgagtt
ggctggttcccctctgactgcctagaagaggtagcaaaccgctcccaggagggaagacaa
gaaagccgaagcgacaaggcaaagagactcttcaggcattacacagtgggctcctatgac
agcttcgatgccccaagtctgatcgatgggattgactcagggagtgattacatcatcaag
gagaagacagtcttactgcagaagaaggacagtgaggggttcgggttcgtcctccggggg
gccaaggcgcagacccccatcgaggaattcacccccaccccggccttcccggcgctgcag
tacctcgagtctgtggacgagggtggcgtggcatggcgggctggactgcgaatgggagac
ttcctcatcgaggtgaacggacagaatgtcgtgaaggttggccaccggcaggtggtcaac
atgatccgccagggaggcaacacactgatggtcaaggtggtgatggtggccagaaaccca
gacatggacgaagccgctcacaaaaaagcatcccagcaggctaagcggctcccgccccca
gccatctccctgcgttccaagtctatgacctcagagctggaggaaatggtctccccctgg
aagaagaaaattgaatacgaacaacagcctgcgccagtgcccagcatggagaaaaagcgg
actgtgtatcagatggcactcaacaaactggatgagatcttggctgctgctcagcagacc
atcagcgcaagtgagagtcctgggcctggtggcctcgcgtccctgggcaagcaccggccc
aaaggattctttgccactgagtccaactttgacccccaccaccgctcccagccaagttac
gaccggccttccttcctgcctcctggacctggccttatgctccggcagaaatctattggg
gctgcggaagatgacaggccctacctagcacccccagccatgaaattcagtcgcagtctg
tcagtccctggttcagaggatatacccccaccacccacgacatccccgccagagcctccc
tacagcacacctccggccccgtcctcttccggccgcctcactccctcccctcggggaggc
cccttcaacccaggttctgggggtcccctcccggcctcctccccttcatctttcgatggg
ccatctcctcctgacacccgtagtgggggccgagagaagagcctgtatcacagtggagcc
ctaccccctgcccatcaccacccacctcatcatcaccatcatcacgccccacctccgcag
ccccaccatcaccatgcacaccctcctcacccgccagagatggagacaggtggttccccc
gacgaccccccacctcgactggccctgggaccccagcccagccttcgaggctggcgaggc
ggaggacccagcccgacctcgggggccccatcaccttcccaccacagtagcagcggaggc
agcagcggccccactcaggctcccgccctgcgctacttccagctgcccccgagggcggcc
agtgcagctatgtatgtgcctgcccgctcgggccgcggacgcaagggcccactggtcaag
cagaccaaagtggaaggcgagccccagaagggcagcctccctcccgcgtcctccccaaca
tccccggcgttgccccggcctgaaccacctccggccggaccacctgagaaaaactccatc
cctatccctaccatcatcatcaaagccccatccaccagtagcagcggccgcagcagccag
ggaagcagtacagaggccgagccccccacccagcccgacggtgcgggcggcggcggatcc
tcgcccagccctgcgcctgccacgtcccctgtgccgccgtccccgtcgcccgtgcccacc
cctgggtcgcccagcggcccagccacactagatttcaccagccagtttggagcagccctg
gtgggcgcggcgcggagggagggaggctggcagaacgaagcccggcggcggtccacgctg
ttcctgtccactgatgccggagatgaggatggaggtgacggcgggctgggcccgggggcg
cccccaggcccccggctgcgccactccaaatccattgatgaaggcatgttctccgccgag
ccatacctccggctggagtcggggggcagcagcgcgggctacggagcctacgcagccggc
agccgagcctatgggggcagcgggagcagcagcgcttttaccagtttcctccccccgcgg
cccctggtgcatccgctgactggcaaggccttggatcccgcctctccgctggggctggcc
ttggccgcccgggagcgggccttgaaggagtcctcggagggtgggggcgcccctcagccg
cctccgagacctccctcgccacgctacgacgccccaccgcccaccctccaccaccactca
ccccactcgccacatgcgcgtcacgagccagtgctgcgcctctggggggaccccgcgcgc
cgggagctggggtaccgggcaggcctagggagtcaggagaaagcccttcccgccagtcca
cctgcagctcgccgctccctgctgcaccgtctgcccccgacggctcccggggtcgggccg
ctcctgctgcagctgggtccggaacccccaactcccctccctggggtgagcaagccctgg
cgcactgcagcccccgaggagcctgagcgcctgccgctgcatgtgcggttccttgagaat
tgccaggcccggcctcccgcagcgggcacgagagggtcctccactgaagatggacctggg
atgccaccgcccagtcctcgcagggtcttgccagcctctcccacctccccgaggggcagt
gaggagaacggccttccgctgctggtcctgccgccgccagccccttcggtggatgtggac
gacggcgagttcctctttgcggagccgctgcctccccccctggagttttccaatagcttc
gaaaagccagagtcgcctctcacgcccgggcctccccacccgctgcctgaccctccctcc
ccggctacccctctacccgcagccccacccccggctgtggccgcagcccctcccaccctg
gactccaccgcgtccagcctgacctcttatgacagcgaagtagctacgctgacccagggg
gctcccgcggctcctggggacactcctgctccaggcccgccagctcccgcagccccagct
cccccagcccctcagccaggccctgatcctccacctggcacggattctggaatcgaggaa
gtggacagtcggagcagtagtgatcacccgctggagaccatcagcagcgcgtccacactc
agcagcttgtcggcggaaggaggaggcaacactggaggagtggctgggagcggggccggg
gtgaccagtgggacggagctcctggatacctatgttgcctacctggatggccaggccttc
gggggcagtgggactcctggcccgccataccccccacagctcatgactccctccaaactc
cggggccgggcgcttggggctggtggaaatttgagacctggtcccggtgggggcctccga
gatcctgtcacccccaccagccccacggtctctgtgaccggagctggaacagatgggcta
ctggccttgagtgcttgctccggaccttccacggcaggtgtggcgggtgctcccggggcg
gttgagcccgaagtcccgcctgtacctttgcccactgcctcgtccttgcctcggaagctg
ctaccgtgggaggagggtccgggacccccaccaccacccctgccagggcccctgtcccag
cctcaggcctctgccttggccacggtcaaagccagcatcatcagcgaactcagctccaag
ctccagcagtttggtgggtcctctgccgcgggaggagctctgccttgggctcggggaggc
agcgggggcagcacagacagccaccacggaggaaccagttacatcccagagaggacctcc
tccctgcagcggcagaggctctccgaagactcccagacctctctcctctccaaacccagc
agcagcatctttcagaactggcctaaatcccctctgcctccactccccaccggatctggg
gtctcttcaacagctgcagccccaggagctacatccccttcagcctcatccgcctcagct
tccacccgacatctgcagggcgtggaatttgagatgcgctctccgttgctccgccgggca
ccgagcccctcgctgctgcctgcctcggatcacaaggtcagcccagcgcccagaccctct
tctttgcctatcctgccttcaggacccctctacccgggcctcttcgacatccgtagctct
ccgaccggaggggcaggaggctcggctgacccttttgctcccgtctttgtgcccccacac
cccgggatatctgggggtctcggaggagccttgtcgggggcctctcgctccctatcaccc
acccgcctgctctcgctgcccccggacaagccatttggcgccaagcctctggggttctgg
accaagtttgacgtcgccgattggctggagtggctgggcttatcagagcaccgagcccag
ttcctggaccatgagattgatggctcccacctgcccgccttgaccaaggaggactatgtg
gacctgggcgtgaccagggtgggccaccgtatgaacattgaccgggctctcaaatttttc
ctggagaggtga
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