Phodopus roborovskii (desert hamster): 127214118 Help Entry 127214118         CDS       T08852                                  Symbol Vcl Name (RefSeq) vinculin isoform X1   KO K05700   vinculin Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04510   Focal adhesion prob04520   Adherens junction prob04670   Leukocyte transendothelial migration prob04810   Regulation of actin cytoskeleton prob04820   Cytoskeleton in muscle cells prob05100   Bacterial invasion of epithelial cells prob05146   Amoebiasis Brite KEGG Orthology (KO) [BR:prob00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127214118 (Vcl)    04520 Adherens junction     127214118 (Vcl)   09142 Cell motility    04820 Cytoskeleton in muscle cells     127214118 (Vcl)    04810 Regulation of actin cytoskeleton     127214118 (Vcl)  09150 Organismal Systems   09151 Immune system    04670 Leukocyte transendothelial migration     127214118 (Vcl)  09160 Human Diseases   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     127214118 (Vcl)   09174 Infectious disease: parasitic    05146 Amoebiasis     127214118 (Vcl)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:prob04812]     127214118 (Vcl)    04147 Exosome [BR:prob04147]     127214118 (Vcl) Cytoskeleton proteins [BR:prob04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actin-binding proteins     Cross-linking proteins      127214118 (Vcl) Exosome [BR:prob04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    127214118 (Vcl) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vinculin Talin_IBS2B VMAP-M0 Motif Other DBs NCBI-GeneID:  127214118 NCBI-ProteinID:  XP_051030412 LinkDB All DBs Position Unknown AA seq 1134 aa AA seqDB search MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLVDPNGGPEGEEQIRGALAEARKIAE LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQSKTNKA VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS DTTTPIKLLAVAATAPPDAPSREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM AARQLHDEARKWSSKQGIPAAQVGIGVVAEADAADAVGFPFPSDMEDDYEPELLLMPSNQ PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ NT seq 3405 nt NT seq  +upstreamnt  +downstreamnt atgccggtgtttcacacacgtacgatcgagagcatcctggagccggtggcgcagcagatt tcgcacctggtgattatgcacgaggagggcgaggtggacggcaaagccattcctgacctc accgcgcccgttgccgctgtgcaagcggccgtcagcaacctcgtccgggttggaaaagag acagttcagaccactgaggatcagattttgaagagagatatgccaccagcatttattaag gttgagaatgcttgcactaagcttgttcaggcagcccagatgcttcaggctgacccatac tcagttcctgctcgggattaccttattgatggctctagaggaatcctctctggcacatca gacttacttcttacctttgatgaggctgaggttcgtaagattattagagtttgcaaagga attttggaatatcttacagtggcagaggtagtggagactatggaagatttggtcacttac acaaagaatcttgggccagggatgactaagatggcgaaaatgattgatgagcgacagcag gaattgactcaccaggaacaccgagtgatgctggtgaactcaatgaacactgtcaaagaa ctgcttcctgttctcatttcagccatgaagatttttgttacaaccaaaaactcaaaaaac caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaagatgagtgctgaa attaatgagatcattcgtgtgttacaactcacttcttgggatgaagatgcctgggccagc aaggacactgaagccatgaagagagcactggcatccatagactccaaactgaaccaggcc aaaggttggctccgtgaccccagtgcctccccaggggatgctggtgagcaggccatcagg cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag atcctaggaacctgcaaaatgctagggcagatgactgaccaagtggctgatctcagagcc agaggacaaggagcctcaccagtggctatgcagaaggcccagcaggtgtctcagggtctt gatgtgctcactgcaaaagtggaaaatgcagctcgaaagctggaagctatgacaaactca aagcagagcattgcgaagaagattgatgctgcccagaattggcttgtggatccaaatggt ggacctgaaggagaggaacagattcgaggggctctggctgaagctcggaagattgcagaa ttatgtgatgatcctaaggagagagatgacatcctacgctcccttggagagatagctgct ctgacctctaaactgggagatttacgaagacagggaaaaggagactccccagaggctcga gcattggctaaacaggtagccacagccctgcagaacctacagagcaaaaccaacaaggct gtggccaacagcagacctgccaaggcagcggtccacctcgagggcaagattgaacaagca cagcggtggattgataatcctaccgtagatgatcgtggagtcggtcaggctgccatccgt ggacttgtggctgaagggcatcggctggccaatgtcatgatgggaccttatcgccaagat cttcttgccaagtgtgaccgtgtagatcagctaacagcccagctggctgacctggctgcc cgtggggaaggggagagtcctcaggcgagagcacttgcatcccagctccaagactcctta aaggatcttaaagcccagatgcaggaagctatgactcaggaggtatctgacgttttcagc gataccacaactcctattaagctgttggcagtggcggccacagctcctcctgatgcaccc agtcgggaagaggtatttgatgagagggcagccaactttgaaaaccattcaggaaggctt ggagccacagcggagaaggcggctgctgttggtactgccaataaatcgacggtggaaggc attcaggcctcagtgaagacagcccgagaactcactccccaggtcatctctgctgctcga atcttactgaggaaccctggaaaccaagctgcttatgaacattttgagactatgaagaac cagtggattgataatgttgaaaagatgacagggctggtggacgaggctattgataccaaa tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc atggccaatattcagcctcagatgctggtcgctggagcaaccagcattgctcgtcgggcc aaccggatcctgctggttgctaagagggaggtagagaactctgaggacccgaagttccgt gaggctgtgaaagctgcctctgatgaattgagcaaaacaatctccccaatggtgatggat gccaaggctgtggctggtaacatctctgatcctggcctgcaaaagagcttcctggactca ggatatcggatcctgggagccgtggccaaggtcagagaagcctttcaacctcaggagcct gacttcccacctcctccaccagaccttgaacagctccgactaactgatgagcttgctcct cctaaaccacctctgcctgagggtgaagttcctccacctaggcctccaccaccagaagag aaggatgaagagttccctgagcagaaagctggggaggtgattaaccagcccatgatgatg gctgccaggcagctccatgatgaagctaggaagtggtctagcaagcagggtatcccagcc gctcaggtgggtataggagttgtagctgaggcagatgcggctgatgctgttgggttccct ttcccctctgacatggaagacgattacgaacctgagctgctgttaatgccatctaatcag ccggtcaaccagcccattctggccgcggctcagtccttgcaccgggaagctaccaagtgg tctagtaagggtaatgacatcattgcagcagccaagcgcatggctctgctgatggcagag atgtctcggctggtaagagggggcagtggtaccaagcgggcacttattcagtgtgccaag gacatcgccaaggcttctgatgaggtgactcggctggccaaggaggttgccaagcagtgc acagataagaggattagaaccaatctcttacaggtatgtgagcgaatcccaactataagc acccagctcaaaatcctgtccacagtgaaggctaccatgctgggcaggaccaacatcagc gatgaggaatctgagcaggccacagagatgctggtccataatgcccagaacctcatgcag tctgtgaaggagactgtgcgagaagcagaagcggcttcaatcaaaattcgaacagatgct ggatttactctgcgctgggtccgaaagactccctggtaccagtag

DBGET integrated database retrieval system