Phodopus roborovskii (desert hamster): 127214161
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Entry
127214161 CDS
T08852
Symbol
Abcb4
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob02010
ABC transporters
prob04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127214161 (Abcb4)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
127214161 (Abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prob02000
]
127214161 (Abcb4)
Enzymes [BR:
prob01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127214161 (Abcb4)
Transporters [BR:
prob02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127214161 (Abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
AAA_5
Zeta_toxin
AAA_14
AAA
AAA_29
AAA_28
G-alpha
SbcC_Walker_B
AAA_7
APS_kinase
nSTAND1
DUF87
DUF815
DUF2207_C
NTPase_1
Motif
Other DBs
NCBI-GeneID:
127214161
NCBI-ProteinID:
XP_051030503
UniProt:
A0AAV0AE39
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MDLEAARNGTARRPGTVEGDFELGSISNQSRDKKKKVNLIGPLTLFRYSDWQDKLFMLLG
TIMAIAHGSGLPLMMIVFGEMTDKFVNNAGNFSLPVNFSLSMINPGRILEEEMTRYAYYY
SGLGGGVLVAAYIQVSFWTLAAGRQIKKIRQNFFHAILRQEMGWFDIKGTTELNTRLTDD
ISKISEGIGDKVGMFFQAVATFFAGFIVGFIRGWKLTLVIMAISPILGLSAAVWAKILST
FSDKELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQKHLENAKKIGIKKAISANIS
MGIAFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANA
RGAAYVIFSIIDTNPKIDSFSERGHKPDSIKGNLDFSDVHFSYPSRANIKILKGLNLKVQ
SGQTVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRNFNVRYLREIIGVVSQEPV
LFSTTIAENIRYGRGNVTMDEIKKAVKEANAYEFIMKLPQKFDTLVGERGAQLSGGQKQR
IAIARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVI
AGFEDGVIVEQGSHSELMQKEGVYFKLVNMQTSGSQILSEEFEVELSEEKAASGMAPNGW
KSHIFRNSTKKSLKSSRAHQHRLDVDPNELDANVPPVSFLKVLKLNKTEWPYFVVGTVCA
IVNGALQPAISIILSEMIAIFGPGDDAVKQHKCNMFSLVFLGLGVLSFFTFFLQGFTFGK
AGEILTTRLRSMAFKAMLRQDMSWFDDHQNSTGALSTRLATDAAQVQGATGTRLALIAQN
TANLGTGIIISFIYGWQLTLLLLSVVPFIAVSGIVEMKMLAGNAKRDKKALEAAGKIATE
AIENIRTVVSLTQERKFESMYVEKLHGPYRNSVQMAHIYGITFSISQAFMYFSYAGCFRF
GAYLIVNGHMRFRDVILVFSAIVFGAVALGHASSFAPDYAKAKLSAAHLFSLFERLPLID
SYSREGLWPDKFEGSVTFNEVVFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTV
VQLLERFYDPMAGTVLLDGQEAKKLNVQWLRAQLGIVSQEPILFDYSIAENIAYGDNSRV
VSQDEIVRAAKAANIHPFIETLPQKYETRVGDKGTQLSGGQKQRIAIARALIRQPRVLLL
DEATSALDPESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQ
LLAQKGIYFSMVNIQAGAQNS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggcagcgaggaacggaacagcgcggcgccctgggacagtggagggcgac
tttgaactaggcagcatcagcaaccaaagcagggataaaaagaagaaagtgaatttaatt
ggaccgttgacactgttccggtattctgactggcaggacaaattgttcatgctcctgggc
actatcatggccatagctcatggatcaggtcttcccctcatgatgatagtctttggagaa
atgacagataagtttgtgaataatgctgggaacttttccttgccagtgaatttttcgctg
tcaatgataaatccagggaggattctggaagaagaaatgactagatatgcatattactac
tcgggactaggtggtggagttcttgttgctgcctacatccaagtttcattctggactttg
gcagctggccggcaaataaagaaaatcagacaaaatttttttcatgccatcctccgacaa
gaaatgggctggtttgatatcaagggcaccaccgaactcaacacacggctgacagatgac
atctccaaaatcagtgaaggaattggtgacaaggttggaatgttctttcaagcagtggcc
acgttttttgcaggattcatagtggggttcatcagaggatggaagctcacattggtgatc
atggccattagccccatccttggcctctctgcagctgtttgggcaaagatactctcaaca
tttagtgacaaagaactagctgcatatgcaaaagcaggtgccgtggctgaagaggctctg
ggagccatcaggaccgtgatagctttcgggggccagaacaaagagctagaaaggtatcag
aaacacttagaaaatgccaaaaaaattggaattaaaaaggctatctcagcaaacatatcc
atgggcattgccttcttgttaatatatgcatcctatgcactggcattctggtatggatcc
actctggttatatcaaaagaatatactattggaaatgcaatgacagtgttcttctcaatc
ctcattggggctttcagtgtggggcaggctgccccctgtattgatgcctttgccaatgca
cgaggagcagcttatgtgatctttagtattattgacactaaccctaaaattgacagtttt
tcagaaagaggacacaaaccagacagcatcaaaggaaatttggacttcagtgatgttcac
ttttcctatccatctcgggctaatatcaagatcttgaagggcctcaacctgaaggtgcag
agtggacagacagtggccctggttggcaacagtggctgtgggaaaagcaccactgtccag
ctgctgcagaggctctacgaccccacagagggtacgattagcattgacgggcaggacatc
cggaacttcaatgtcaggtacctgcgggaaatcattggagtggtgagtcaggagccagta
ctgttttctaccacgattgctgaaaatattcgctatggccgtgggaatgtaaccatggat
gagataaagaaagctgtcaaagaagccaatgcttatgagttcatcatgaaattaccacag
aaatttgacactctggttggtgagagaggggcacagctgagtgggggacagaaacagaga
atcgccattgctcgtgccctggtccgcaaccccaagatcctcctgctagatgaggcaaca
tcagccttggacactgaaagtgaagccgaggtacaggcagctctggataaggccagagaa
ggccgaaccactatcgtgatagctcaccgattgtctacggtcagaaatgcagatgtcatt
gctgggtttgaggatggagtcatcgtggaacaaggaagccacagtgagctgatgcagaag
gaaggggtctacttcaaacttgtgaacatgcagacatcaggaagccagatcctatcagaa
gaatttgaagttgaactaagtgaagaaaaggctgctagtggcatggcccccaacggctgg
aaatctcacatatttaggaattctaccaaaaaaagtttgaaaagttcacgagcgcatcag
cacaggctagatgtagaccccaacgaacttgatgcaaatgtacctccagtgtcttttctg
aaagtcttgaaactgaataaaactgagtggccctactttgtggtgggaacggtctgtgcc
attgtcaacggggccctccagccagcgatctccattatcctatcagagatgatagctatc
tttggtcctggggatgatgcagtaaaacagcacaaatgcaacatgttctcactggtcttc
ttgggcctgggagtcctttccttctttacttttttccttcagggctttacatttgggaaa
gctggcgagattctcaccacaaggctgaggtccatggcctttaaagcaatgctgcggcaa
gacatgagctggtttgatgatcaccaaaacagcactggagcactttctacgagactcgcc
acagacgctgcgcaagtccagggagccacaggaaccaggttggctttaattgcacagaac
acagccaacctaggaaccggtatcattatatcatttatctacggttggcaattgacactt
ttgctgttatcagttgttccgttcattgctgtatcaggaattgttgagatgaaaatgttg
gctggaaatgccaagagagataaaaaagcactggaagctgctggaaagattgcaacagag
gccatagagaatattaggactgttgtgtccttgacccaggaaagaaaatttgaatcaatg
tatgttgaaaaattgcatggaccttacaggaattcagtgcagatggcacacatctatggc
atcacctttagcatctcccaagcatttatgtatttttcctatgctggctgttttcgcttt
ggtgcttacctcattgtgaatggacatatgcgcttcagagatgtcattctggtattttca
gcaattgtgtttggcgcagtggctctaggacatgccagctcatttgctccagactatgcg
aaagccaagctgtctgccgcacacttattcagcctgtttgaaagactgcctctgattgac
agctacagcagagaagggctgtggcctgataagtttgaaggaagtgtgacatttaatgaa
gtcgtgttcaactaccctacccgacctgacatcccagtgcttcaggggctgagcctggag
gtgaagaagggccagacgctggccctggtgggcagcagtggctgcgggaagagcacagtg
gtccagctgctcgagcggttctacgaccccatggccggaacagtgctcctagatggtcaa
gaagcaaagaaactcaatgtgcagtggctccgagcccaacttggcattgtgtcccaagag
cccatcttatttgactacagcatcgctgagaatatcgcctatggagacaacagccgggtt
gtatctcaagatgagattgtgagggcggccaaagcagccaacatccaccccttcattgag
acgctgccccaaaaatatgaaacaagagtaggagacaaggggactcagctctcgggaggc
cagaaacagaggattgctatcgctcgagccctcattagacaacctcgggtcttgctgcta
gatgaagccacgtcagctctggatcctgagagtgaaaaggttgtccaggaagccctggac
aaagccagggaaggccgcacctgcattgtgatcgctcaccgcctgtccaccatccagaat
gcagacttgatcgtggtgattcagaatggcaaggtcaaggagcatggcacccaccagcag
ctgctggcacaaaaaggcatctatttttccatggtcaatattcaggccggtgcacagaac
tcatga
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