Phodopus roborovskii (desert hamster): 127214327
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Entry
127214327 CDS
T08852
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03022
Basal transcription factors
prob05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127214327
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
127214327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127214327
03036 Chromosome and associated proteins [BR:
prob03036
]
127214327
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127214327
Coactivators
SAGA/TFTC/STAGA complex
127214327
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
127214327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
127214327
NCBI-ProteinID:
XP_051030687
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MPAGLTEPAGAAAPVVAGASGAVTMAPAAALPVRVESTPVALGPVTTAPVGVCVESGAPQ
PLPSPVGTLVTKVVPVTALPKLGGPRLPAPQIVTVKTPGTTTIQLPANLQLPPGTVLIKS
NSGQLMLVSPQQAVTGAKTTSNLTPRPAVPANTQTVKICTVPNSSSQLMKQVAVAPVNNL
TQMGTTVVTTASSGSSGQSVAVPPVKPVNTVTILKPSSLGAISTPSNDSNLKAETSVAAQ
TNLSPTVLENVKKCKNFLSMLIKLACSGSQSPEMGRNVRKLVEQLLDAEIEAEEFTRKLY
IELKSAPQPHLVPFLKKSVVALRQLLPNSQSFIENCVQEISSEVVVASCTTTATTSPVVT
STVSPVLVSGATAPRTLSVQTLNALSGPGGANTGVVALHSVTPGAVTGGSTPATVLLQTS
KPLTPSVPNTVTAVSIHPEKPVVSGAAVTLALPSVTFGDTSAAPVCLPSVKPAITSAGTK
PDKPVIGTPVQIKLAQPGPLLPQSAGIPQAVQVKQLVPQKMPKGGNTKQVTTISHSSPLI
TQKCGTKMPVNTVVPTTPIIKQITLPGNKLVSLQAQTSSIQNSKIKENGAPCFRGEDDIN
DVTCMAEVNLDEENACILATHSEFVGTLIQSCKEEPFLFIGALQKRILDIGKKHNITELN
SDAVNLISHATQERLRGLLEKLTTIAQHRMTVYKGSENYILSTDTRSQLKFLEKLDQLEK
QREDLEERDVT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgggcctcacggagccggccggcgccgccgctccggtggtcgcgggcgcctcg
ggggccgtgaccatggcccccgccgccgcgctgcccgtgcgggtggagagcaccccggtg
gccctgggccctgtgactacggctcctgtcggcgtctgcgtggagtccggggcgccccag
cccctgccatcccccgtggggaccctagtgaccaaagtggtccctgtcaccgcgcttcct
aaactcggcggccccaggctgcccgctcctcagatagtcaccgtgaagactcccggcacc
acgacgatccagctgccggcgaatttgcagctgcctccaggaacagttttgatcaaaagt
aacagtggtcagttgatgctggtatctcctcagcaagctgtgacaggagcgaagaccaca
agtaacttaactccaaggccagcagtaccagcaaacactcaaacagtcaagatctgtaca
gtgccgaattctagctcacaattaatgaaacaagtagcagtggctcctgttaataatttg
acacagatgggaactactgtggtaaccactgcctccagtggttcttcaggacaatctgtg
gctgtacctcctgtcaagccagtgaatactgtaactatcctgaagccatcaagtttggga
gcaatatctacaccctcaaatgattccaatctcaaagcagagacctcagtagctgctcag
actaatctttctccgacagtgctggaaaatgtgaaaaaatgcaaaaacttcctttcaatg
ttaataaaactagcatgtagtggatcacaatcccctgaaatgggacggaatgtgaggaag
ctcgtggagcaacttctggatgcagaaattgaagcagaagaatttactaggaaactatat
attgaactcaagtctgcacctcaaccacatcttgtaccttttcttaagaagagtgtggtt
gcattacgacagcttctccctaactcccagagcttcattgagaactgtgttcaggagatc
tctagtgaggtggtcgttgcctcttgtaccacgacagcaacgacttctcctgtggtgaca
agtactgtttccccagtccttgtctctggagcaacagcacccagaactctgtctgttcag
actctgaatgcactctctggtccaggaggagcaaacactggagttgtggcattgcactct
gtgactccaggtgctgtaacaggaggttcaacacctgcaactgttttgctccagacttca
aaacctcttacaccatcagtaccaaatacagtgacagcagtatccattcatcctgagaag
ccagtcgtgtctggggcagcagttacactggcccttccatcagtaacttttggagatact
tcagctgcacccgtttgtcttccgtctgtgaagcctgccattacctctgctgggaccaaa
cctgataaacccgtcattggcactccggtccagatcaagcttgcacagccaggccccctt
cttccacagtcagctggcattccacaggccgtccaagtcaagcaactagttccacagaag
atgcccaaaggaggcaatacaaaacaggtgaccaccatttcccattcctcgcccttgatc
actcagaaatgtgggacaaagatgccagtgaatactgtagtgcctactactcccatcata
aagcaaattactctgcctggaaataaacttgtctcacttcaagctcaaacatcttctatt
cagaacagtaaaataaaagagaatggagcaccatgcttcagaggtgaagatgacatcaat
gatgtgacttgcatggcagaagtcaaccttgatgaagaaaacgcctgcatcttagcaaca
cattctgaatttgttggcacactcattcagtcgtgtaaagaagaaccatttcttttcatt
ggagctctacaaaagagaattttagacattggtaaaaagcataacattacggaacttaac
tctgatgctgtgaacttgatctcccatgcaacacaggagagattgcgaggcctgctagag
aaactgactacaattgctcagcatcgaatgactgtttacaagggaagtgaaaattacatc
ttgtctactgacaccagatcacagctcaaatttcttgaaaagctagatcaattggaaaaa
cagagggaggatctagaagaaagagatgttacttag
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