Phodopus roborovskii (desert hamster): 127214466
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Entry
127214466 CDS
T08852
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127214466 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127214466 (Mid1)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127214466 (Mid1)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127214466 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
zf-C3HC4_2
NDNF
Motif
Other DBs
NCBI-GeneID:
127214466
NCBI-ProteinID:
XP_051030813
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESISAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSSSLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYMFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVALSQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtcctatttgtctggagctctttgaggaccct
ctcctgcttccctgcgcacatagcctctgtttcaactgcgcccaccgcatcctggtctct
cactgtgccacaaacgagtctgtggagtccatcagcgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgtaacgtcactctacag
aacatcattgacaggtttcagaaagcatctgtgagcgggcccaattcccctagtgagacc
cgcagggagcgggcctttgacgccaacaccatgtcctctgctgagaaggttctctgccag
ttctgtgaccaggatcctgcccaggatgctgtgaagacctgtgtcacttgtgaagtgtcc
tactgcgatgagtgcctgaaagccactcacccgaacaagaagccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagccttgagtgagcgctatgacaaattgaag
caaaacttggagagcaatctcaccaatctcattaagaggaacacagaactggagaccctt
ttggctaaactcatccaaacctgtcagcatgttgaagtcaatgcatcacgtcaagaagcc
aaattgacagaagaatgtgatcttctcattgaaatcattcagcaaagacgacaaattatt
ggaacgaagattaaagaaggaaaggtgatgaggctccgcaaactagctcagcagattgcg
aactgtaaacagtgcattgaaaggtcgtcatcactcatctcccaagcggaacactctctg
aaggagaatgaccatgcccgttttctacagacagcaaagaatatcactgagagagtctcc
atggcaactgcatcctcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
acttttgccttagatttttctcgggagaagaaactgctagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccatcact
gtccactggacttcagatgatgagttcagtgtggtctcctatgaactccagtacaccata
ttcactggacaagccaatgttgttagtctgtgtaactcagctgatagctggatgattgtg
cccaatatcaagcagaatcactacactgtgcatggcctacaaagtggcaccaagtacatg
ttcatggtcaaggccatcaaccaggcaggcagccgcagcagtgagcctgggaagttgaag
acaaacagtcagccatttaaactggatcccaaatctgctcatcgaaaactgaaggtgtcc
catgataacctaactgtagaacgagatgagtcatcatccaaaaagagtcacacacctgaa
cgcttcactagccaagggagttatggagtggctggaaacgtgttcattgatagtggccgc
cattactgggaagtggtcataagtggaagcacatggtacgccattggccttgcatacaaa
tcagcccctaaacatgaatggattgggaagaattctgcatcctgggccctctgccgctgc
aacaataactgggtggttaggcataacagcaaggaaattcccattgagccagccccccac
ctccggcgtgtaggcatcctgctggactatgataatggttccattgctttttatgatgct
ttgaactccatccacctctacacctttgacgtggcactttcacagcctgtgtgccccaca
tttactgtgtggaacaagtgtttgacgattataactggtcttcccatcccagaccatttg
gactgcacagaacagctgccttga
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