Phodopus roborovskii (desert hamster): 127215138
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Entry
127215138 CDS
T08852
Symbol
Col10a1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
127215138 (Col10a1)
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Paralog
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
127215138
NCBI-ProteinID:
XP_051031493
UniProt:
A0AAU9YT44
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Position
Unknown
AA seq
680 aa
AA seq
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MLPPTAVLLLTCLTSVHGVFYAERYQTPTGIKGPLQNTKTQYFIPYSIKTKGIPVRGEQG
VPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGISATGKPGLPGLPGKPGVR
GPHGHKGDIGPAGLPGPRGPPGPPGLPGPAGISVSGKPGQQGLTGAPGPRGFPGEKGAPG
ARGVNGQKGETGYGAPGRPGERGLPGPQGPTGPPGPPGVGRRGENGFPGQPGIKGDRGFP
GERGPSGPPGPQGPPGKEGREGVGKPGVAGAPGEPGTPGEKGHPGAPGIAGPPGAPGFGK
PGLPGLRGQRGPAGLPGAPGAKGEQGPAGHPGEAGLTGSPGNVGPQGPKGTPGNPGVPGP
KGEAGPMGPVGPPGGRGARGPPGLDGKTGYPGEPGLNGPKGNPGPPGPKGDPGVGGPPGP
QGPAGPAGAKGLPGHNGEAGPRGEPGTPGSRGPIGPPGTPGFPGAKGVPGNPGPPGPAGI
ATKGLSGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQGVMPDGFIKAGQRPRLSGTPLV
SANHGVTGVPVSAFTVVLSKAYPAVGAPIPFDEILYNRQHHYDPRTGIFTCKIPGIYYFS
YHVHVKGTHVWVGLYKNGNPTMYTYDEYSKGYLDQASGSAIMELTENDQVWLQLPNAESN
GLYSSEYVHSSFSGFLVAPM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaccaacagccgttctgctgctaacgtgcctgacctcagttcatggagtgttt
tacgctgagagataccagactcccacgggcataaagggcccacttcagaacaccaagaca
cagtacttcatcccatactccataaagacgaaaggaatcccggtaagaggagagcaaggc
gttcctggtccaccaggcccagcgggaccccgaggacacccaggtccctcaggacctcca
ggaaagccaggctatggaagccctgggctccaaggagagccagggttgccaggaccacca
ggaatatcggccactgggaagccaggcctgcctggcctgccaggaaaaccaggggtgaga
gggccacatggacacaaaggagacattggaccagctggcttaccaggacctcggggccct
ccaggaccacctgggctccctggcccagctggaatttctgtgtcaggaaaacctggacag
cagggacttacaggtgccccgggacccaggggctttcctggagaaaagggggcacctgga
gcccgtggtgtgaacggacagaaaggggaaacaggatatggtgctcctggccgtccaggt
gagagaggtcttccaggccctcagggtcccacaggaccccctggccctcctggagtggga
cgaagaggtgaaaatggttttccaggacagccaggaatcaaaggtgatcgggggttccca
ggagaaaggggaccatcaggtccaccaggaccccaagggcctcctgggaaagagggacga
gaaggtgttgggaagccaggagttgccggagccccaggtgagccaggtaccccaggagaa
aaaggccacccgggagctccaggaatagctgggcctccaggagctcccggctttgggaaa
ccaggcttgccaggtttgaggggacaaagggggccagctggtcttcctggggctccaggg
gccaaaggcgaacaagggccagccggtcatcctggggaggcaggtctgactggatcccca
ggaaatgtgggaccccaaggaccaaaagggaccccaggcaaccccggtgtcccaggtcct
aaaggcgaggcgggtccaatggggcctgtaggcccacctgggggtagaggagcaaggggt
ccccctgggttagacgggaaaacagggtatcctggggagccaggtctcaatggccctaag
ggtaacccagggccaccaggcccaaagggtgatcctggagtgggaggaccccctggtccc
caaggccctgctggccctgcaggagctaagggacttcctggacacaacggtgaggcaggt
ccaagaggtgaaccgggaacaccaggtagcaggggtcccattgggccgccaggcacccca
gggttccctggagctaagggtgtccctggaaaccctggtcctcccggcccagctggcata
gcgactaagggcctcagtgggcccacaggtcctccaggccctcctggtccaagaggacac
agtggagagcctggtctcccaggtcccccgggtcccccaggaccccctggccaaggagtc
atgcctgatggcttcataaaggcgggccaaaggcccaggctttctgggacgcctcttgtc
agtgcgaaccatggagtaacaggggtgcccgtgtctgctttcacagttgtcctctccaaa
gcttacccagctgtaggcgcccccatcccattcgatgagattctgtataacaggcagcat
cattatgacccgaggactggaatcttcacctgtaagatcccaggcatatactatttctcc
tatcacgtgcacgtgaaggggactcacgtttgggtaggactgtataagaacggcaacccc
acaatgtacacatatgacgagtacagcaaaggctacctggatcaggcttcggggagcgca
atcatggagctcacagaaaacgaccaggtgtggctgcagctgcccaatgcggagtcaaac
ggcctctattcctctgaatatgtccactcctccttctctgggttcctagtggcgcccatg
tga
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