KEGG   Phodopus roborovskii (desert hamster): 127215138
Entry
127215138         CDS       T08852                                 
Symbol
Col10a1
Name
(RefSeq) collagen alpha-1(X) chain
  KO
K19479  collagen type X alpha
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:prob00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    127215138 (Col10a1)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 127215138
NCBI-ProteinID: XP_051031493
UniProt: A0AAU9YT44
LinkDB
Position
Unknown
AA seq 680 aa
MLPPTAVLLLTCLTSVHGVFYAERYQTPTGIKGPLQNTKTQYFIPYSIKTKGIPVRGEQG
VPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGISATGKPGLPGLPGKPGVR
GPHGHKGDIGPAGLPGPRGPPGPPGLPGPAGISVSGKPGQQGLTGAPGPRGFPGEKGAPG
ARGVNGQKGETGYGAPGRPGERGLPGPQGPTGPPGPPGVGRRGENGFPGQPGIKGDRGFP
GERGPSGPPGPQGPPGKEGREGVGKPGVAGAPGEPGTPGEKGHPGAPGIAGPPGAPGFGK
PGLPGLRGQRGPAGLPGAPGAKGEQGPAGHPGEAGLTGSPGNVGPQGPKGTPGNPGVPGP
KGEAGPMGPVGPPGGRGARGPPGLDGKTGYPGEPGLNGPKGNPGPPGPKGDPGVGGPPGP
QGPAGPAGAKGLPGHNGEAGPRGEPGTPGSRGPIGPPGTPGFPGAKGVPGNPGPPGPAGI
ATKGLSGPTGPPGPPGPRGHSGEPGLPGPPGPPGPPGQGVMPDGFIKAGQRPRLSGTPLV
SANHGVTGVPVSAFTVVLSKAYPAVGAPIPFDEILYNRQHHYDPRTGIFTCKIPGIYYFS
YHVHVKGTHVWVGLYKNGNPTMYTYDEYSKGYLDQASGSAIMELTENDQVWLQLPNAESN
GLYSSEYVHSSFSGFLVAPM
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgctgccaccaacagccgttctgctgctaacgtgcctgacctcagttcatggagtgttt
tacgctgagagataccagactcccacgggcataaagggcccacttcagaacaccaagaca
cagtacttcatcccatactccataaagacgaaaggaatcccggtaagaggagagcaaggc
gttcctggtccaccaggcccagcgggaccccgaggacacccaggtccctcaggacctcca
ggaaagccaggctatggaagccctgggctccaaggagagccagggttgccaggaccacca
ggaatatcggccactgggaagccaggcctgcctggcctgccaggaaaaccaggggtgaga
gggccacatggacacaaaggagacattggaccagctggcttaccaggacctcggggccct
ccaggaccacctgggctccctggcccagctggaatttctgtgtcaggaaaacctggacag
cagggacttacaggtgccccgggacccaggggctttcctggagaaaagggggcacctgga
gcccgtggtgtgaacggacagaaaggggaaacaggatatggtgctcctggccgtccaggt
gagagaggtcttccaggccctcagggtcccacaggaccccctggccctcctggagtggga
cgaagaggtgaaaatggttttccaggacagccaggaatcaaaggtgatcgggggttccca
ggagaaaggggaccatcaggtccaccaggaccccaagggcctcctgggaaagagggacga
gaaggtgttgggaagccaggagttgccggagccccaggtgagccaggtaccccaggagaa
aaaggccacccgggagctccaggaatagctgggcctccaggagctcccggctttgggaaa
ccaggcttgccaggtttgaggggacaaagggggccagctggtcttcctggggctccaggg
gccaaaggcgaacaagggccagccggtcatcctggggaggcaggtctgactggatcccca
ggaaatgtgggaccccaaggaccaaaagggaccccaggcaaccccggtgtcccaggtcct
aaaggcgaggcgggtccaatggggcctgtaggcccacctgggggtagaggagcaaggggt
ccccctgggttagacgggaaaacagggtatcctggggagccaggtctcaatggccctaag
ggtaacccagggccaccaggcccaaagggtgatcctggagtgggaggaccccctggtccc
caaggccctgctggccctgcaggagctaagggacttcctggacacaacggtgaggcaggt
ccaagaggtgaaccgggaacaccaggtagcaggggtcccattgggccgccaggcacccca
gggttccctggagctaagggtgtccctggaaaccctggtcctcccggcccagctggcata
gcgactaagggcctcagtgggcccacaggtcctccaggccctcctggtccaagaggacac
agtggagagcctggtctcccaggtcccccgggtcccccaggaccccctggccaaggagtc
atgcctgatggcttcataaaggcgggccaaaggcccaggctttctgggacgcctcttgtc
agtgcgaaccatggagtaacaggggtgcccgtgtctgctttcacagttgtcctctccaaa
gcttacccagctgtaggcgcccccatcccattcgatgagattctgtataacaggcagcat
cattatgacccgaggactggaatcttcacctgtaagatcccaggcatatactatttctcc
tatcacgtgcacgtgaaggggactcacgtttgggtaggactgtataagaacggcaacccc
acaatgtacacatatgacgagtacagcaaaggctacctggatcaggcttcggggagcgca
atcatggagctcacagaaaacgaccaggtgtggctgcagctgcccaatgcggagtcaaac
ggcctctattcctctgaatatgtccactcctccttctctgggttcctagtggcgcccatg
tga

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