Phodopus roborovskii (desert hamster): 127215390
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Entry
127215390 CDS
T08852
Symbol
Tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127215390 (Tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127215390 (Tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prob03016
]
127215390 (Tnpo3)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
127215390 (Tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
127215390
NCBI-ProteinID:
XP_051031772
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MEGAKPTLQLVYQAVQALYHDPDPSGKERASFWLGELQRSVHAWEISDQLLQIRQDVESC
YFAAQTMKMKIQTSFYELPTDSHASLRDSLLTHIQNLKDLSPVIVTQLALAIADLALQMP
SWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSSTV
VSLLMTCVEKAGTDEKMLMKVFRCLGSWFNLGVLDSNFMANNKLLALLFEVLQQDKTSSN
LHEAASDCVCSALYAIENVETNLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLEKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTNDEV
IHSIFKAYIQRLLHALARHCQLEPDHEGVPEETDDFGEFRMRVSDLVKDLIFLIGSMECF
AQLYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLVEVLEGVVRLPETVHMAVRYT
SIELVGEMSEVVDRNPQFLDPVLGYLMKGLCEKPLASAAAKAIHNICSVCRDHMAQHFNG
LLEIAHSLDSFMLSPEAAVGLLKGTALVLARLPLDKITECLSELCSVQVMALKKLLSQEP
SNGISSDPTVFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRIVE
RCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYRVHQHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVTLLRSQVVIPILQWA
IASTTLDHRDANCSVMRFLRDLIHTGVANDHEEDFELRKELIGQVMNQLGQQLVSQLLHT
CCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLKGLPKETTVGAVTVTHKQLTDFHK
QVTSAEECKQVCWALRDFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggagggagccaagccaaccttgcagctcgtgtaccaggcagtgcaggcgctttaccac
gacccggatcccagcggaaaggagcgcgcctcgttttggcttggggagctgcaacgttcg
gtgcatgcatgggagatttctgatcagttgttacagatccgacaggatgtggaatcatgc
tattttgctgctcagaccatgaaaatgaagattcagacctcattttatgagctccccaca
gactctcatgcttctttaagggactcattgctaactcacattcaaaacttgaaagacttg
tcacctgtcattgtaacacagctggctttagcaatagcagaccttgccctacagatgcct
tcttggaagggatgtgtacaaacgttggtagaaaaatatagcaatgatgtaacatctttg
ccttttttgctggagatccttacagtgttacctgaagaagtacacagtcgttccttgcga
attggagccaacaggcgcacagaaattatagaagacttggccttctattctagtacagta
gtatctttgttgatgacatgtgtagaaaaagcagggactgatgagaagatgcttatgaag
gtcttccgctgtttgggaagctggtttaacttgggagttttggacagtaacttcatggct
aataataagttattagcactcctttttgaagttttgcaacaggataagacttcatctaat
ctacatgaagctgcttcagactgtgtgtgctcagctctctatgctattgaaaatgtggag
accaacttgccattggccatgcagctttttcagggggtcctgacattggagactgcctat
catatggctgtggcacgtgaagatttagacaaagttctgaattactgccgtatcttcact
gaactgtgtgaaactttcctggaaaaaattgtttgtactccaggccaaggtctgggagac
cttcgaactttggaactgcttcttatttgtgcaggccaccctcagtatgaggtagtagaa
atttcctttaacttttggtatcgactaggagaacatttgtacaaaaccaatgatgaggtt
attcatagcatcttcaaagcatacattcagagactgcttcatgccttggctcgacactgc
cagttggagccagaccatgagggagttcctgaagagactgatgactttggggagtttcga
atgcgagtgtcagacctggtgaaggacctgatcttcttgattggttctatggaatgtttt
gctcagttgtattctactctgaaagaaggcaacccaccctgggaggtgacagaagcggtt
ctctttatcatggctgctatagcaaagagtgttgatccggagaacaatcctacacttgtg
gaggtactagagggtgttgtccgtctcccagagactgtacatatggctgtgcggtacaca
agcattgagctggttggagaaatgagtgaagtcgttgaccgaaaccctcagttcctggac
cctgtattgggctatttgatgaaaggcctgtgtgaaaagcctctggcttctgctgcggcc
aaagccattcataacatttgttcagtttgtcgggatcatatggctcagcactttaatgga
cttctagaaattgcccactcccttgattctttcatgttatctccagaagctgctgtgggt
ttgctaaaaggaacagctcttgtcctagcaagactacctttggataagattactgaatgt
cttagcgagctgtgctctgttcaggttatggcattaaaaaagctgttgtctcaggagccc
agcaatggcatatcttcagatcccactgtgttcttagatcgcctggcagtaatatttaga
cacaccaatcctattgtagaaaatggacagactcatccatgccaaaaagtcatacaggaa
atatggccagttttgtctgagacgctaaataagcaccgagctgacaatcggattgtagag
cgttgttgcagatgcctgcgctttgctgttcgttgtgtaggcaaagggtctgcagctcta
ctacagccactagtcacacagatggtgaatgtgtaccgtgtacatcagcactcctgtttc
ctgtacctcggcagtatccttgtggatgagtatggcatggaagaaggctgtcggcagggg
ttattagatatgctccaggcgctatgcattcccacctttcagctcctagaacaacagaat
ggtctccaaaatcatcccgacactgtagatgacctattcaggttagccacccgatttatt
cagcgtagccctgtcaccttattgaggagccaagtagtcatcccaatcttacagtgggcc
attgcgtctaccaccttagaccaccgagatgccaactgtagcgtcatgagattccttcga
gaccttatccacacaggagtagcaaatgatcatgaagaagattttgaattgcgaaaggaa
ctgattggacaagtgatgaaccagcttgggcagcagcttgtaagccagctgctgcatacg
tgctgcttttgtctacccccgtacaccctgccagacgtggctgaagtgctctgggagatc
atgcaggtcgacaggccgactttctgtcggtggctagagaattccttgaaaggtttgcca
aaggagacaactgtgggagctgttacagtgacacataaacaacttacagatttccacaag
caagtcactagtgctgaggaatgtaagcaagtttgctgggccttgcgagacttcaccagg
ttgtttcgatag
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