Phodopus roborovskii (desert hamster): 127215736
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Entry
127215736 CDS
T08852
Symbol
Cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127215736 (Cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127215736 (Cnot2)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127215736 (Cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127215736 (Cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
127215736
NCBI-ProteinID:
XP_051032172
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLNTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtggacagcgactaccatgatgaaaacatgtactacagccaatcttctatgttc
ccacatcggtcagagaaagatatgctggcatcgccatctacatcaggtcagctgtctcaa
tttggggcaagtttatacgggcaacaaagtgcactaggccttccaatgagggggatgagc
aacaatacccctcagttaaaccgcagcttatcacaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcacacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatatgtatgccaaagcagcagccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagatggcagtgaaaatgtgacagggttggacctttcagatttc
ccagcgttagcagaccgaaatagaagggaaggaagtggtaacccaaccccgttaataaac
cccttggccggaagagcaccttacgttggaatggtaacaaaacctgcaaatgagcaatcc
caggacttctcaatacacaatgaagacttcccagcattacctggctccagctataaagac
ccaacgtcaagtaatgacgacagcaaatctaatttgaatacatcaggaaagacaacttca
agtacagatgggcccaaattccctggagataaaagttcaacgacacaaaacaataatcag
cagaaaaaggggatccaggtgttacctgatggccgggttactaacattcctcaagggatg
gtgacggaccaatttggaatgatcggcctgttaacatttatcagggcagcagagaccgac
ccaggaatggtacatctcgctttaggaagtgacttaacaacattaggcctcaatctgaac
tctcctgaaaatctctatcccaaattcgcatcaccctgggcatcctctccttgtcgacct
caggacatagacttccatgttccatctgaatatttaacgaacattcacattagggacaag
ctggctgcaatcaagcttggccgatatggagaagacctcctcttctatctctattacatg
aatggaggagatgtgttacaactcttagctgcagtagagctctttaaccgagattggaga
taccacaaagaagaacgggtgtggattaccagagcgccaggcatggagcccacgatgaaa
accaacacctatgagaggggaacgtattacttctttgactgtcttaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagaacggcctcacctgccatccacc
ttcaactacaaccctgctcagcaagccttctaa
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