Phodopus roborovskii (desert hamster): 127216010
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Entry
127216010 CDS
T08852
Symbol
Rfc5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03030
DNA replication
prob03410
Base excision repair
prob03420
Nucleotide excision repair
prob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127216010 (Rfc5)
03410 Base excision repair
127216010 (Rfc5)
03420 Nucleotide excision repair
127216010 (Rfc5)
03430 Mismatch repair
127216010 (Rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prob03032
]
127216010 (Rfc5)
03036 Chromosome and associated proteins [BR:
prob03036
]
127216010 (Rfc5)
03400 DNA repair and recombination proteins [BR:
prob03400
]
127216010 (Rfc5)
DNA replication proteins [BR:
prob03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127216010 (Rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
127216010 (Rfc5)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127216010 (Rfc5)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127216010 (Rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
127216010 (Rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_11
AAA_24
AAA_16
AAA_assoc_2
RuvB_N
AAA_14
AAA_lid_RFC1
DEAD
DUF815
ResIII
nSTAND_NTPase5
AAA_30
AAA_5
AAA_19
PhoH
ATPase_2
AAA_7
TIP49
TniB
nSTAND3
DNAX_ATPase_lid
Mg_chelatase
bpMoxR
Thioredoxin_6
AAA_3
NPHP3_N
AAA_2
Motif
Other DBs
NCBI-GeneID:
127216010
NCBI-ProteinID:
XP_051032480
UniProt:
A0AAU9YVJ9
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MALVPPEQRPSAARARNLPWVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPP
GTGKTSTILACAKQLYKDKEFSSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLV
ILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELM
VPRLEHVVREENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEDTVYTCTGHP
LKTDIANVLDWMLNQDFTTAYRYIMELKTLKGLALHDILTEVHLFVHRVDFPSSVRIHLL
TKMADIEYRLSVGTSEKIQLSSLIAAFQVTRDLIVSEA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggtgcctccggagcagcggccctcggcggcccgggcccggaacttgccctgg
gttgaaaagtaccggccacagaccctggccgacctcatttctcaccaggacattctgagc
accattcagaagttcatcagtgaggaccgcctgccacacctgcttctctatggccctccg
gggacaggaaagacatccaccatcctggcctgtgccaagcagctgtacaaagataaagaa
ttcagctccatggtcttggagctgaacgcttctgatgaccgagggatagacattgtccgg
gggccaatcctcagcttcgccagcacaaggacaatcttcaagaaggggtttaagcttgtg
atcctggatgaagctgatgccatgactcaagatgcccagaatgccttgagaagagtgatt
gagaagtttacagaaaacaccaggttctgcctcatctgcaactatctgtccaagatcatc
cctgccttgcagtctaggtgcacaaggttccgatttggtcccctaacgccggaactcatg
gttccccgcctggagcatgtagtgcgagaggagaatgttgacatcagtgaagatggaatg
aaggcccttgtcactctgtccagtggggatatgcgcagggctctgaacatcctacagagt
accaacatggcctttgggaaggtgacagaagacaccgtgtacacctgcaccggacacccc
ctcaagacagacatcgccaacgttctggactggatgctgaatcaagacttcaccaccgcc
tacaggtacatcatggagctgaagactctgaagggcttggctctgcatgacatcctgact
gaggttcacttgtttgtgcacagagttgactttccatcttcggttcggatacatttattg
actaaaatggcagacattgagtacagactctccgtcggcaccagcgagaagatacagctg
agttccctcatcgctgcttttcaagtcaccagggacctgattgtctccgaggcctag
DBGET
integrated database retrieval system
