Phodopus roborovskii (desert hamster): 127216303
Help
Entry
127216303 CDS
T08852
Symbol
Frem2
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127216303 (Frem2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
prob04091
]
127216303 (Frem2)
Lectins [BR:
prob04091
]
C-Type lectins
Lecticans
127216303 (Frem2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
HCV_NS4a
Motif
Other DBs
NCBI-GeneID:
127216303
NCBI-ProteinID:
XP_051032882
LinkDB
All DBs
Position
Unknown
AA seq
3152 aa
AA seq
DB search
MATRARRTAKSSGFQTIPTQSSRLLLLFLSLVSRVSTQPAVPGEAFLFPGLSGTSVVPAE
EAIVVANRGLRVPFGREVWLDPVRDLVLQVQPGDRCSVTVLDNDALAQRPGRLSPKRFAC
DYGPGEVRYLHLGARSPSRDRVRLQLRYDAPGGAIVLPLALEVEVVFTQLEVVTRNLPLV
VEELLGTSNALDSRSLEFAYQSETEECRVGILSGLSALPRYGELLHYPQVPGGTSETLLM
DCKAFLELGVRYRHTAPSRSPNRDWLPMVVELHSRGAPMGSPPLKREHFQVLVRIRGGAE
NTAPKPSFVAMMMMEVDQFVLTALTPDMLAAEDAESNPDLLIFNLTSAFQPGQGYLVSTD
DRSLPLSSFTQRDLRLLKIAYQPPSEDSNEERLFELELEVVDPEGAASDPFAFMVVVKPM
NTLAPVVTRNTGLILYEGQYRPLTGPVGSGPQNLVISDEDDLEAVRLEVVAGLRHGHLVV
LGSPSSDSAPKTFTVAELAAGQVVYQHDDRDGSLSDNLVLRMSDGEGRHQVQFLFPITLV
PLDDQPPVLNANTGLTMAEGETVPVPPTTLSATDMDSDDSQLRFVLESPFSTTGYLLLRQ
THAPQEEQGLWQKRGLFYERRVTEWRQQDITEGRLFYRHSGPHSPGPVMDQLTFRVQDNH
DPPNQSGIQKFVIRIHPVDRLPPELGRGCPLRMVVQESQLTXTEKKWLHYTDVDTDDREL
HYTVTQPPMDTDENHAPAPLGTLVFTDNPSIIVTHFTQAQVNHHKIAYRPPNQELGVAAR
VAQFQFQVEDRAGNVAPGTFTLYLQPVDNQPPEIVNTGFTIEEKGHHILQETELHVNDVD
TDVAHISFTLTQAPKHGHMQISGQTLHVGGHFRLEDIQHGRVSYSNSGDESLTDSCSLEV
SDRHHVVPITLRVNIKPVDREGPRSILPAGTLESYLDVLENGATEVTANIIKGTYQDTDD
LMLTFLLENPPLYGEILVNGAPAEHFTQRDILEGSVVYVHTSGEIGLLPKADSFNLSLSD
MSQEWRIGSSIIQGVTVWVTILPVDSQAPEISVGEQFVVLEGDKSMITLTHLSAEDTDSL
NDDLLCTIVIQPTSGYVENISPAPGSEKSRAGIAISAFTVKDLRQGHINYVQSVHRGVEP
VEDRFIFRCSDGINFSERQIFPIVIIPTNDEQPEMFMREFMVMEGMSLVVDTPILNAADA
DIPRDDLTFTITRFPTHGHIMNQLINGTVLVESFTLDQIIESSSIIYEHDDSETQEDSFV
IKLTDGKHSVEKMALIVVIPVDDETPRMTINNGLEIEVGETKVINNKILMATDLDSDDKS
LVYIIRYGPGHGLLQRQKPTGVFENITLGMNFTQDEVDRNLIQYVHFGQEGIRDLIKFDV
TDGTNALIDRYFYVSIGSVDIVFPDVISKGVSLREGGKVTLTTDLLSTSDLNSPDENLVF
TITRAPMRGHLECTDQRGVSITSFTQLQLAGNKIYYIHTAEDEVKMDSFEFQVTDERNPV
FRTFRISISDVDNKKPVVTIHNLVVSESESKLITPFELTVEDRDTPDRLLKFTVTQVPVH
GHLLFNNTRSVMVFTKQDLNENLISYKHDGTESTEDSFSFTVTDGTHSDFYVFPDTVFET
RRPQVMKIQVLAVDNSVPQIVVNKGASTLRTLATGHLGFMITSKVLKVEDRDSLHFSLRF
IVTEAPQHGYLLNLGQGNHSITQFTQADIDDLKICYVLRERANATSDMFHFIVEDDGGNK
LTNQHFRLNWAWISFEKEYYLINEDSKFLDIVLKRRGYLGETSFISISTRDGTAQRDSDF
KGKAQRQVQFNPGQTRALWRVRILGDEVHEHSETFQVVLSEPVLAALEFPTVTTVEIIDP
GDESTVFIPQSEYSVEEDVGELFIPIRRSGDVSQELMVICYTQQGTATSTVRTSVLSYSD
YISRPEDHSSVVRFDKDEREKMCRVVVIDDSLYEEEETFQVLLSMPMGGRIGDKFPGAKV
TILTDKDDEPVFYFGDVQYSVDESAGYVEVQVWRTGTDLSRPSSVTVRSRKTEPPSADAG
TDYVGISRNLDFAPGVNMQTVRVVILDDLGRPILEGIEKFELVLRMPMNAALGEPSKATV
SINDSASDLPKMQFKERVYTCSENDARVVAMIYRSGDVQHSSSVRCYTRQGSAQVMMDFE
ERPNTDASTVTFLPGETEKPCVLELMDDDVHEDVEELRLVLGTPQSSSAFGATVGEQNET
LIKIQDDADKAVIKFGETKFSVTEPSEPGESVVVRIPVVRQGDTSKVSIVRVHTKDGSAT
SGEDYHPMSEEIEFKEGETQHIVEIEVIFDGVREMREAFTVHLKPDENMVAETQATKAIV
YIEEFNSMADVTFPSVPHIVSLLIYDDTSKAKEDGPVSGYPVVCITACNPKYPDYDKTGS
ICASESINDTLTRYRWLISAPAGPDGVTSPMREVDFDTFFTSSKMITLDSIYFQPGSRVQ
CAARAVNTNGNEGLELMSPIVTIGREEGLCQPRVPGVVGAEPFSAKLRYTGPEDPDFANL
IKLTVTMPHIDGMLPIISTRELSNFELTLSPDGTRVGNHKCSNLLDYNEVKTHHGFLTNA
TKNPEVMGETYPYQYSVPVRGSSTLRFYRNLNLEACLWEFVSYYDMSELLADCGGTIGTD
GQVLNLVQSYVTLRVPLYVSYVFHSPVGVGGWQHFDLKSELRLTFVYDTAILWSHGIGSP
PEAELQGSLYPTSMRIAEDGRLAVNFKTEAQFHGLFVLSHPASFTSSVIVSTDHPGLTFS
LRLIRSDPTYNQPAQQWSFVSDFAVRDYSGTYTVKLVPCTTPPNLEYRLPVTCNPREPVI
FDLDIRFQQVSDPVAAEFSLNTHMYLLSKKSLWLSDGSMGFGQESDVAFAEGDMIYGRVM
VDPVQNLGDSFYCSIEKVFLCTGDDGYVPKYSPENSEYGCLADSPSLLHRFKIVDKAQPE
TQATSFGDVLFNARLAVDDPEAVLLVNQPGSDGFRVDSTPLFQVALGREWYIHTIYTVKS
KDNSHRGIGKRSLEYLYHSVVHQGHPQATTKSWKKRAIRSTPSLAREIGAENNRGTNLQH
ISLDRRDKRQVPYGRIPPDGILPWELNSPSSEVSLVTVLGGVAAGLLIVCLAVVAVLVCK
NKSIKGKNAPQGSGSSEPMVLPQNHYSDSSEV
NT seq
9459 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgagcgcgcaggacagccaagtcctccggcttccagacgatacccacacag
tcgtccaggctgctgctgctgttcctgtcactggtaagccgcgtctccacacagcccgct
gtcccaggagaagcatttttgttcccgggtctttccgggacttcagtggtccctgcagag
gaagctatagtggtggcgaaccgcgggctccgggtgcccttcggtcgcgaagtctggctg
gatccagtgcgtgacttggtgctgcaggtgcagccaggggatcgctgctcagtgactgtg
ctagataatgacgcgctggcccagcggcctggccgcttgagtcccaagcgcttcgcgtgc
gactatggcccgggagaggtgcgctacttgcacctgggtgctcgcagcccttcgcgcgac
cgcgtccggctgcagctgcgctatgatgccccaggaggggcgatagtcctgcctttggcc
ttagaggtggaagtggtattcactcagctggaagttgtgactcggaacttacctctggtc
gtggaagaactactagggaccagcaatgccctggactctcggagcttagagtttgcctac
cagtctgagactgaggagtgccgcgtgggcatcttgtcaggtttgagtgctttgcctcgt
tatggagagctccttcactacccacaggtcccaggagggacctcggagacccttttgatg
gactgcaaagcattcctggagctgggagtgcgctatcgtcacacagctcccagtcgctca
cctaacagggactggctacctatggtggtagagctacactctcgaggggctcctatgggt
agcccgcctttaaaacgtgagcacttccaggtgcttgtgaggatccgcggaggagcagag
aacactgcaccgaagcccagtttcgtggccatgatgatgatggaggtggaccagtttgta
ctgaccgctctaacaccagacatgctggcagcagaggatgctgaatccaacccggacctt
ttgatcttcaacctcacctctgccttccagcctgggcagggctacttggtgagcactgat
gaccgaagcctgcctctctcctcctttacacaacgggatttgcgcttgctgaagattgcc
taccagcctccctctgaagactctaacgaggagcgtctgtttgaactggaactggaggta
gtggaccccgaaggagcagcctcagacccttttgccttcatggttgtggtgaagcccatg
aatacgttggccccagtggtcacacgaaacactggccttattctctatgaaggtcaatat
cggccactcacgggtcctgtaggcagtggaccccagaacttggtcatcagtgatgaagac
gatctcgaagctgtgagactagaggtggtagccgggctccggcatggccaccttgttgtt
ctagggtctcccagtagtgactctgctcccaagaccttcacagtggctgagctggccgct
ggccaggttgtctaccagcatgatgacagagatggctcactgagtgacaacctggtgctg
cgcatgtcagatggagaaggcaggcaccaggtccagttcctgttccccatcactttagtg
cctttggatgaccagccacctgtcctgaacgccaacactgggctgaccatggcagagggc
gaaactgtgcctgtcccacccacgactctgagtgcaactgatatggattcagatgactct
cagttgcgatttgtactagaatcacctttctcaaccacagggtacctacttctccgccaa
actcatgctccccaggaagagcaggggctgtggcagaaacgcgggctgttttatgagcga
agagtgacagaatggcggcaacaggatatcacagaaggaaggctcttctacaggcactca
gggccccatagtcctgggcccgtgatggaccaattgacatttagagtccaagacaaccat
gacccccctaaccaatctgggatccaaaagtttgtgatacgcattcatcctgtggaccgc
cttcctccagaactgggccgtggctgtccccttaggatggtggtacaggaatcccagctc
acanccactgagaaaaagtggctgcactacactgatgtggacacagatgatagagagcta
cactacacagtgacccagccccccatggacacagatgaaaaccatgcacctgctccacta
ggcactttggtcttcactgataatccctcaatcatagtgacccattttacccaagcccag
gttaaccatcataaaattgcttacaggccccccaatcaagagctaggagtagcagctcga
gtggcacagtttcaattccaagtagaggatcgagctgggaatgttgctccgggcaccttc
actctttacctgcagcctgtggataaccagcctcctgagattgtcaatactggcttcact
attgaggagaagggccaccacatcctgcaggagactgagctgcacgtgaatgatgttgac
accgatgtggcccacatctctttcactctcacacaggctcccaagcatggccacatgcaa
atctctggccagacattacatgtcggaggacacttccgtttagaggacatacagcatggc
agagtctcctattcaaatagcggggatgaatctttgactgacagctgctccctggaggtc
agtgatagacaccatgtggtgcccatcactctcagagtgaatattaagccagtagaccgt
gaaggtcccaggtcaatccttccagctggcactctggagtcctatctagatgtcttggaa
aatggggctactgaagtcactgccaatatcattaaggggacctatcaagatactgatgat
ttaatgttgactttcctattggaaaatccacctttatatggggaaattctggtcaatgga
gctccagctgagcatttcactcagagggacatcctggagggttctgttgtctatgtccac
accagtggtgagattggcctgttgcctaaagcagactcttttaacctgagcctgtcagat
atgtctcaagaatggagaattggcagcagtattattcaaggtgttactgtgtgggtgacc
attctacctgtggacagccaagccccagaaatttctgttggggagcagtttgtagtgcta
gaaggtgacaagagtatgataaccctaacccatctaagtgctgaggacacagactcactg
aacgatgacctcttgtgcacaatagtcattcagccaacctcaggctatgtggagaacatt
tctccagcaccaggctcagagaagtcaagagctgggattgccattagtgccttcactgtg
aaggatctcaggcaaggacacattaattatgttcagagtgtccacaggggggttgagcct
gtggaagaccgttttatattccgttgttctgatggcattaacttttctgagagacagatt
ttccccattgtaatcattcctaccaatgatgaacagccagaaatgttcatgagggaattc
atggtgatggaaggcatgagtctggtggttgacacacccatcctcaatgctgcagatgct
gacattccccgggatgatttaactttcaccattacccggtttccaactcatggtcacatc
atgaaccagctgatcaatggtacagtgttggtcgaaagcttcaccctggaccagattata
gagagttccagcattatttatgagcatgatgactctgagactcaagaagacagttttgtg
attaaattgacagacggcaagcactctgtggagaaaatggccctcattgtggtcatccct
gtggatgacgagacccccaggatgaccatcaataatgggctagaaatagaagttggggaa
accaaagttatcaacaacaaaatactaatggcaactgatttagactctgatgacaaatca
ttggtttatattattcgttatggaccaggacatggcttgttacagaggcaaaaacctaca
ggtgtctttgaaaacatcaccctaggcatgaattttacccaggatgaagtggacagaaat
ttaattcagtatgtccattttgggcaagagggcattcgagacctaattaaatttgatgtg
acagatggaacgaatgcccttatcgatcgatacttttatgtgtctattggaagtgttgat
attgtcttccctgatgtgataagtaagggtgtgtccttgagagaaggtggcaaagtcact
cttacaacagacctactgagtacaagtgacttgaatagtcctgatgagaacttagttttc
actattaccagggctcctatgagaggtcacttggagtgcacagatcaaagaggagtgtcc
atcacttctttcactcagctccaattggctggtaacaagatctactacatccatacagct
gaggatgaggtaaaaatggacagttttgagtttcaagtcacagatgagcggaaccctgtc
ttccgaacattccggatctccatcagtgatgtagacaacaaaaagccagtggtcaccatc
cacaacttggtggtcagcgaaagtgagagcaagctgatcactccctttgagctcactgtg
gaagacagagatactcctgacaggctcctcaaattcactgtcacccaggtccccgttcac
gggcacctcctattcaacaacactagatccgtcatggtttttaccaagcaagacttgaat
gaaaacttaatcagctacaaacatgatggcacagagtccacggaagacagtttctccttc
acggtgactgatggcacccactctgacttctatgtttttcctgatacagtatttgaaact
aggagacctcaagtcatgaaaatccaagtgctggctgttgacaacagtgttccccaaatt
gtggtgaacaaaggagcttctacacttcgtactctggccactggacatttggggttcatg
atcacaagcaaagtactgaaagtggaggacagagacagcctacatttttctctcaggttc
attgtgacagaagctccccaacatggctaccttctaaacctgggccaaggtaaccacagc
atcacacagtttacacaagctgacattgatgacctgaaaatatgctatgtcttaagagag
agagctaatgccacaagtgatatgttccatttcatagtggaagatgatggtgggaacaag
ttaaccaaccagcattttcgactgaattgggcatggatctccttcgaaaaggagtattac
ttgatcaacgaagattccaaatttcttgatattgttcttaaacgcagaggatacctggga
gaaacttcatttataagcatcagcacgagggatgggactgcacaaagagacagcgacttc
aagggcaaggcccagcgacaagtgcagttcaaccctggccagaccagggccttgtggaga
gtgcggatcttgggcgatgaggtgcatgagcactcagagaccttccaggtggttctctct
gagcctgtgctggcagccctggagttccccacagtgaccactgtggagatcattgaccca
ggcgacgaatctaccgtgttcattccccagtcggaatactctgttgaagaagatgtgggc
gagctgttcattcccatcaggagaagtggagatgtcagccaggagctgatggtgatctgc
tacacacagcaagggacagcaaccagcactgtgcggacatcagtgctgtcttactccgac
tacatctccaggcctgaggaccacagtagtgtggtccgctttgacaaagatgaacgtgag
aaaatgtgccgtgtggtagtaattgatgactcattatacgaagaggaagagactttccag
gtccttttgagcatgcccatgggcgggaggatcggtgacaagtttccaggagccaaggtg
accatactgacagacaaggatgacgagcccgtcttctactttggggatgtccagtactcc
gtggatgagagtgccggctacgtggaggtgcaggtgtggaggacgggtactgacctctcc
aggccttcaagtgtcaccgtgaggtcccgtaaaacagagcccccctctgcagatgctgga
acagattatgtgggaatcagtcgcaatttagattttgcacctggcgtcaacatgcagact
gttcgtgttgtcattctggatgacctgggaagacccatactggagggaattgaaaagttt
gaattggtacttcgcatgccgatgaacgctgcccttggcgagcccagcaaggccacagtg
tccataaatgactctgcctcagacttgcctaaaatgcaattcaaagaaagagtgtacact
tgcagtgaaaatgatgcccgtgtagttgcaatgatctacaggagtggtgatgtccagcac
agctcctctgtgagatgctacacaaggcaggggtcagcacaggtgatgatggacttcgaa
gaacgcccaaatactgatgcctccactgtcactttcctcccaggtgagacggagaagccc
tgcgttcttgagctgatggatgatgatgtacatgaggatgtggaggagctgcgcctggta
cttggcacgccacagagcagctctgcctttggggctacagtcggcgaacaaaatgaaact
ctgataaagatccaggatgatgctgacaaagctgttatcaagtttggagaaaccaaattt
agtgtcaccgaacccagtgaaccaggagagtcagtggttgtcagaattccagtggtccgc
caaggagacacttctaaggtttccattgtgagagttcacaccaaggatggctcggccacc
tctggagaggattatcaccctatgtcagaagaaatcgagtttaaggaaggggaaacccag
cacattgttgaaattgaagtaatcttcgatggggtaagagagatgagagaggccttcact
gttcacctaaaaccagatgaaaatatggtagcagagacacaggcaaccaaggccattgtg
tatatagaggaattcaacagcatggcagatgtcacctttccctctgtccctcatattgtg
tccttgctgatatatgatgatacttccaaagccaaggaggatggacctgtgtcgggatac
cccgttgtctgcattacggcttgcaaccccaaatatccagactatgacaaaactggctct
atttgtgccagtgagagcatcaacgacactttgacccgataccggtggttgattagcgct
cctgctggcccggatggtgtgaccagccctatgagagaggtagacttcgacacctttttc
acatcatccaaaatgatcacgttagactccatatactttcagcctggctcccgggttcag
tgtgcagctcgtgcagtgaacaccaacggaaatgaaggcctggaactgatgagccccatc
gtcaccattggcagagaggaaggtctctgtcagccccgtgtgcctggggtagtgggagcc
gagccattctctgctaaattacgctacactggtcctgaggacccagacttcgcaaacctc
atcaagctcactgtcacgatgccacacatagatgggatgctgcccatcatctccacgaga
gagctgtccaactttgagctgaccctcagccctgatggcactagagttggcaaccacaaa
tgctccaacctgctggactacaacgaagtaaagacccaccatggcttcttgactaatgcc
acgaagaacccggaggtcatgggtgagacctatccttaccagtacagtgtgccggtcaga
ggttccagtaccttgcgcttctaccgaaacctgaatctagaagcctgtctctgggagttt
gtcagctactatgacatgtcagagctcctggccgactgtggaggcaccattgggacagat
ggccaggtcctaaacctagtgcagtcctacgtgaccctccgagttcctctttatgtttcc
tacgtgttccattcgcctgtgggagtggggggctggcagcatttcgacttgaagtcagaa
ctccggctcacgtttgtgtatgacacggccatcctgtggagccacggaatcggcagccca
ccagaagccgaactccaaggctcgctctatccgaccagcatgcgcattgctgaggatgga
cgcctggctgtgaacttcaagacagaagctcagttccatggcttgtttgtgctgtcacat
cctgcctcctttaccagctcagtgatcgtgtctactgaccatccaggcctcactttttcc
ctccgcctcatcaggagtgacccaacctataaccaaccagcccagcaatggagctttgtg
tcagacttcgcagttcgagactactcaggcacatacactgtaaagttggtgccttgcact
accccacccaacctggagtaccgactgcctgtcacctgcaatcccagagagcctgtcatc
tttgaccttgacattcgattccagcaggtcagcgacccagttgcagccgagtttagcctg
aacactcacatgtatttgctgtctaagaagagcctctggttgtccgatggatccatggga
tttgggcaagaaagcgatgttgcttttgcagaaggggacatgatttatggtcgcgtcatg
gtggaccctgtccagaaccttggtgactccttttactgcagtattgagaaggtgttctta
tgcacaggggatgatggctatgtgccaaagtacagcccagagaattcagaatatggctgc
ctggctgattctccttcgcttttacatagatttaaaattgtggataaggctcagcctgag
acgcaagctaccagctttggagatgtcttgtttaatgccagactggcagtggatgaccct
gaagccgttctcttagtgaatcagcctggatcagatggatttagagtagactccacacca
ctctttcaggttgctttgggcagagaatggtatatacacacaatctacacggtcaagtca
aaggacaacagccatcgaggtattggcaagaggagcctggagtacctgtaccactctgtg
gtgcatcagggacatccccaagcaactaccaagagctggaagaagagagcaatcaggagc
acaccctcactggcacgggaaatcggtgctgagaacaatcgggggacaaatctccagcat
atctccctggaccgtcgtgacaagaggcaggtcccctatggaagaattcctcctgatggc
atcctgccctgggagctcaatagtcccagctctgaagtcagccttgtcactgtcttggga
ggcgttgcggcgggattgctcattgtctgcctggctgtggttgcagtccttgtgtgtaag
aacaaaagcatcaagggcaagaatgctccccagggctctggaagcagtgagcccatggtg
cttccacagaaccactacagtgacagctcggaggtgtga
DBGET
integrated database retrieval system
