Phodopus roborovskii (desert hamster): 127216333
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Entry
127216333 CDS
T08852
Symbol
Exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127216333 (Exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127216333 (Exosc8)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127216333 (Exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
127216333
NCBI-ProteinID:
XP_051032914
UniProt:
A0AAU9YZ55
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GIKAEFAAPPLDAPDRGYVVPNVDLPPLCSSRFRTGPPGEEAQVTSQFIADVLENSQIIK
KEDLCISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
SKKKSYLNVRKNPVATSFAVFDDTLLIVDPTGEEEHLSTGTLTIVMDEEGKLCCLHKPGG
SGLTGSKLQDCMSRAVSRHKEVNKLLDEVIQSMKHK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggattcaaaactgtggaaccactggagtattacaggagatttctgaaagaa
aactgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacataggt
tcaatcagtaccgctgacggttctgctctagtgaaactggggaacaccacagtcatttgt
ggaattaaagcagaatttgcagcaccaccactggatgcccctgatagaggatatgttgtc
cctaacgtggatctaccaccgctgtgttcatcgaggtttcggactggacctcctggagaa
gaggcccaagtaaccagccagttcattgcagatgtccttgaaaactcacagataattaag
aaagaggacttatgcatttctccaggcaagcttgcttgggttctatactgtgaccttatt
tgcctcgactatgatggaaatattttggatgcctgcacgtttgctctgttagcagcttta
aagaatgtacagttgcctgaagttactataaatgaagaaactgctttagcagaagttaat
tcaaagaagaaaagttatttgaatgttagaaaaaacccagttgcaacttcctttgcagtg
tttgatgacactttgctgatcgttgatcctactggagaggaggaacacctgtcaacagga
accttaacgatagtaatggatgaggaaggcaagctgtgttgtcttcacaagccaggaggg
agtggacttactggatctaaacttcaggactgcatgagtcgagcagtttcgagacacaaa
gaagtgaacaagttgttagatgaagtcattcagagtatgaaacacaaatga
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