Phodopus roborovskii (desert hamster): 127216481
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Entry
127216481 CDS
T08852
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127216481 (Vps50)
Membrane trafficking [BR:
prob04131
]
Protein recycling
Others
EARP complex
127216481 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
127216481
NCBI-ProteinID:
XP_051033149
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDFDAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVQYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDVNHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAENT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSDDAASASEG
SNVMSTEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSINYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPSVTSSKPVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLNQLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLTKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctctaatgacccggcagggtctgaaaagccctccggagagcctc
agtgattttgatgcctttgagagtcttcgggtccctggaaaggaggaattcagggagctc
cgagaacagccgagcgaccctcaagcggaacaagagctaattaatagtattgagcaagtc
tatttttctgcggatccatttgatattgttcagtatgagctcgagaagcttccacctgtt
ctcaacctgcaagaattagaggaatacagagacaaattaaagcaacaacaagctgcagtc
tctaaaaaagtagcggatttgattcttgaaaaacagcctgcttatgtaaaggagcttgaa
agagttacatcattgcagacaggtcttcagctggctgctgttatctgcacaaatgggagg
agacatttgaatattgcaaaggaaggttttactcaggctagcttaggccttcttgcaaat
caaaggaaacgtcagctgctaattggacttctgaagtcattgagaaccataaagacattg
caaagaacggatgtacgcttaagtgaaatgctggaggaggaggattatccaggagccatt
caactgtgtctagaatgtcagaaggctgccagcacttttaaacactacagctgtataagt
gagctgaattcaaagctgcaggatactttggaacagattgaggagcaattggacgtagct
ctttccaaaatctgcaagaattttgatgttaatcattataccaaggttcagcaagcttac
cgacttcttggaaaaacacagactgcaatggatcaacttcatatgcacttcactcaagcc
attcacaacactgtgtttcaagttgtgcttggctacgtggagctgtgtgcggaaaacaca
gatacaaaattccagaagctacaatataaagatctctgtacgcatgtaacaccagacagc
tatattccatgcctggcagacctgtgcaaagcactgtgggaagtcatgctcagctattac
aggaccatggagtggcacgagaagcacgacagtgacgatgcagcttcagcctctgaagga
agtaatgtgatgagtaccgaagaaaccaattttgatcgtggctatgtaaaaaagaaacta
gaacatggccttacgcgaatatggcaggatgttcaactaaaagtaaaaacctacttgctt
ggaactgatttatctatattcaaatacgatgattttatctttgttttggatatagtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaggagtcc
attagaaaacaaagtatcaattatttcaagaaccaccatagaatacgactggatgaactg
aggatgttcttagagaatgagacgtgggagctttgccctgttaagtcaaatttcagcatc
ttacagcttcatgaatttaaattcctggaacagtcccgctccccatcggtttcacctagc
aagcaaccatcggtaacttcttcaaaacctgtgactttgtttgagcagtactgtagtggt
gggaatccgtttgaaattcaagccaaccacaaagatgaagaaacagaagatgtcttggcg
tctaatgggtacgagtctgatgagcaggagaagagtgcctaccaggagtatgacagtgac
agcgatgttcccgaggagctgaagcgggattatgtggacgagcagacaggcgatgtgccg
gtgaagagtgtttcacgagagacccttaagagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaacacaacactgaatgtaataaggcttgttgggaag
tacatgcagatgatgaacattcttaaaccaattgcctttgatgttatccattttatgtcc
cagctatttgattattacttgtatgcaatatataccttttttggccggaatgattcattg
gaatccacaggacttggcctcagtagtagcagactaagaacaacactaaacagaatacaa
gaaagtcttattgacctggaggtttcagctgatcctactgccacactcacagcggcagaa
gaaagaaaggagaaggtacccagcccacacctcaatcaactagtgattttgacatctggg
gatacattatatgggttggcagagagagtggtagccacagaatccttggtgttcctggct
gaacagtttgagtttcttcagccacatttggatgctgtgatgcctgcagccaaaaagccc
tttctccagcagttttactctcagacagtttcaactgccagtgaactacgcaaacccatt
tactggattgtggctggtaaagctattgattatgaacagatgcttctgctgatgaccaat
gtgaaatgggatgtcaaagagatcatgtcacaacacaacatttatgtagatgcattgctg
aaggagtttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggataccc
ttgcctgtatcaaatatactttgggaacattgtatacgattagccaacagaactattgtg
gaaggatatgccaatgtcaagaagtgcagcaatgaaggtcgtgccttgatgcaattggat
tttcaacagtttttaacaaaacttgaaaaactaactgatattagacccattcctgataag
gaatttgtggaaacgtatatcaaagcctactacctaactgagaatgacatggagcgctgg
atcaaagagcacagggaatattcaacgaagcagctaaccaacctggtgaatgtttgcctg
ggatctcatatcaataagaaagcaagacaaaagctcctagcagctatagatgatatagac
cgacctaaaagataa
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