Entry |
|
Symbol |
Rexo1
|
Name |
(RefSeq) RNA exonuclease 1 homolog
|
KO |
K14570 | RNA exonuclease [EC:3.1.-.-] |
|
Organism |
prob Phodopus roborovskii (desert hamster)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:prob00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127216615 (Rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:prob03009]
127216615 (Rexo1)
Ribosome biogenesis [BR:prob03009]
Eukaryotic type
Pre-60S particles
RNases
127216615 (Rexo1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1201 aa
MLRSTGFFRSIDCPYWAGAPGGPCRRPYCHFRHRGARGPGAPGSSAASPAAGLGYDPYNP
ELPQPPAQRENGTLGQGDGLLELELVNQAIEAVRGEVELEQRRYQELLETARGHGAGAST
LAPCSPPTSLDEDDTFSLSLTYTPGGLLSPDSGYQPTPLAASDEPGNKYSLAPSERGQGR
AGGGTSALEYVPKAVGQPRHCGRPVSGGKYVVDSSKPSTDLEYDPLSNYSARHLGRASAR
DERATKRPRGSRGAEPYTPAIKKPCDPFSGCEARFSDSEDDVASPPKTDSSSPKAGADPE
SKAPGKPASKDGPNPEEGSLRGTKEMAVQYDVGDLEQPPKAADTVALTKLGSPARASQDA
GVPKDGKAKKKKSGTPASLSHKDKARKRDKKRDKDPGRPREKEKVCADKKKSQTGSSRGK
AQGPEGTKKKPPNTTTVASSGKGGLGCPSSGGLRPHTPLACKGESAEKTLSGKLVERKTR
SLDEGAPQGAPKLKKRALSHAELFGDESEEEEDSGLGARAPQVWPPTLSSDSDSDSSLDL
GEMQVPKRLKAAPPTSPAPPSPLSSSSSSGTSQCAEEDVDYSALEKEVDFDADPMEECLR
IFNESTSVKTEDKGRLARQPSKEKAVEKTHAGLTTLFPGQKRRVSHLCKPGKEAEAPKRA
LVAPPARPPTAQEVCYRRAQQAQRNSTNWLQAVQRPTDRLSSVHISAPGEKRRIAHIPNP
RLATAPTGAKRALPASSSQVSHGPEPGSQPLKTRTLSGMASKTTTTVTPKRIAHSPSLQS
LKKPIIPKEFGGKVPTVVRQRYLNLFIEECLKFCSSNQEAIEKALNEEKVAYERSPSKNI
YLNVAVNTLKKLRGLVPNTVPSLSKASGRRVVSHEVVLGGKLAAKTSFSLSRPSSPREEL
RGNTLYSRLREYLLTQEQLKENGYPFPHPERPGGAIIFTAEEKKPKDPSCRICCRCGTEY
LVSSSGRCVRNEECYYHWGRLRRNRVAGGWETQYMCCSAAVGSVGCQVAKQHVQDGRKEN
LEGFVRTFQKDLPEDCHAGVFALDCEMSYTTYGLELTRVTVVDADMQVVYDTFVKPDNEV
VDYNTRFSGVTEADLVDTSITLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVD
TSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIREDAKTK
R |
NT seq |
3606 nt +upstreamnt +downstreamnt
atgctacgttctaccggcttcttccgctccatcgactgcccatactgggcgggagctccc
ggggggccttgccggcggccgtactgccacttccggcaccgcggagctcggggccccggc
gctcccggcagcagcgcggcgtctcctgcagcaggacttggctatgacccgtacaacccg
gagctgcctcagcctcctgcacagagggagaatggcactctgggccaaggtgatggcttg
ctggagctggagctggtcaaccaggccatcgaggctgtgcgaggagaggtggaactggag
cagaggcgctaccaggagctgctggaaacggcacggggccatggtgctggagcgtccacc
ctggcgccctgcagcccgcccacaagcctggatgaagacgacactttctcgctgagtctc
acctatacaccaggtggcctgctaagcccagactcaggctaccagcccaccccactggct
gcctctgatgaaccaggtaacaagtactcattggccccttcagagaggggtcagggcaga
gctggagggggcaccagtgccctagagtatgtccccaaggctgtgggccagccacgccac
tgtggccgtcctgtgtctggtggcaagtatgtggtggacagctcaaagccatcaacagat
ctggagtatgacccactgtccaactactcagcccggcatctcggcagggccagtgccaga
gatgagagggccaccaagcggccaagaggctcccggggagctgaaccctacacgcctgcc
atcaagaagccctgtgaccccttcagcggctgtgaggccagattctcagactcagaagat
gatgtggccagcccgcccaagactgatagcagcagccccaaggctggggcagaccctgaa
agcaaggcacctgggaaacctgcctccaaggacggcccgaaccctgaggagggcagtctg
cggggcaccaaggagatggccgtgcagtatgacgtgggagacctcgagcaacctcccaaa
gcagcagacacagtggccttgaccaagcttggctccccagccagggcctctcaagatgct
ggggtccccaaggatggcaaagccaagaagaagaaaagtgggacaccagccagcctcagc
cacaaagacaaggcccgcaaaagagacaagaagagagacaaggacccaggacggccccgg
gagaaggaaaaggtgtgtgcagacaagaagaagtcacagactggcagctcccggggcaag
gcccagggccctgaagggaccaagaaaaagccacccaacaccaccacggtggccagctca
gggaaaggaggcctgggctgcccctccagtggagggctccggccccacacaccactggcc
tgcaaaggtgagagtgccgagaagacactgtcggggaagttggtggaacgcaagacccgc
tccctggacgagggtgccccgcagggtgcccctaagctcaagaagcgggccctgagccac
gctgaattgtttggggatgagagcgaggaggaggaggactcaggcctaggggccagggca
ccccaggtctggcctcccactctcagctcagactcagactctgactccagtctggacctg
ggtgagatgcaggtgcccaagcgtctcaaggccgcaccacccacttcccccgcaccgccc
tcccccttgtcctcctcctcctcctcgggcaccagccagtgtgcagaggaggatgtggac
tactcggccctggagaaggaggtggacttcgatgcggaccccatggaagagtgcctgcgg
atcttcaatgagtccaccagcgtgaagacggaggacaagggccggctggcccggcagccc
tccaaggagaaggctgtggagaagacgcatgcgggcctgaccactttgttcccaggacag
aagaggagggtctcacacctctgcaagccaggcaaggaggcagaggccccaaagagggcc
cttgtggctcccccagcacggcccccgacggctcaggaggtgtgttaccggcgagcacaa
caggcacagaggaactccaccaactggctacaggctgtccagaggccaactgataggctc
tcttctgtgcatatctcggcccctggggagaagaggaggatcgctcatatacccaatccc
cgcctggctactgcccccacaggtgccaagagggcgctccctgccagcagcagccaggtg
tcccacggtcctgaacctggtagccagccactgaagacacgcacgttgtcagggatggca
tctaagaccaccaccactgtcacgcccaagcgcatcgcccacagcccgtcactccagagt
ctaaagaagcccattatcccaaaagaatttggtggcaaggtccccactgtggtccgccaa
cgctatctcaacttgttcatcgaggagtgtcttaagttctgctcatccaaccaggaggcc
attgagaaggcactgaacgaggaaaaggtggcatatgagcgcagccccagcaagaacata
tacctgaatgtggctgtgaacacccttaagaagctgaggggcctggtccccaacaccgtg
cccagcctcagcaaagccagtggccgcagagttgtgtcccatgaggtggtgctggggggc
aaattggcagccaaaaccagtttctcactgagccgccccagcagcccacgggaggagcta
agagggaacaccctgtacagccgtctcagggagtacctgctcactcaggagcagctcaag
gagaacggctaccccttcccccacccagagcgcccagggggcgccatcatcttcacagct
gaagagaagaagcccaaggacccctcctgcagaatttgctgtcgctgtggcactgagtac
cttgtgtcctcctcgggccgctgcgtgcgcaatgaggagtgttactaccactggggacgg
ctgcggcggaaccgagtggctgggggctgggagacccagtatatgtgctgctcagctgcg
gttggttctgtgggctgtcaggtcgccaagcaacacgtgcaggacggccggaaggagaac
ctggaaggctttgtgcgcaccttccagaaggacctaccagaagattgccacgcaggcgtc
ttcgcccttgactgtgagatgtcctacactacatatggcctggagctgacccgagtcaca
gttgtggatgctgacatgcaggtcgtgtacgacacctttgtcaagcctgacaatgaagtt
gtcgactacaacaccaggttctcgggagtgacagaagccgacctcgtggacacaagtatc
acactgcgggacgtgcaggccgtcttgctgagcatgttcagtgctgacaccatcctcatt
ggacacagcctggagagtgacctgctggccctcaaggttatccatagcacggtggtagac
acatcagtgctgttcccacaccgcctgggcctgccctataagcgctctctgcggaacctc
atggccgactacctcagacagatcatccaagacaatgtggatgggcacagctccagtgag
gatgccagtgcctgcatgcaccttgttatctggaagatccgagaagatgccaagaccaag
cgatga |