KEGG   Phodopus roborovskii (desert hamster): 127216760
Entry
127216760         CDS       T08852                                 
Symbol
Kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:prob03036]
    127216760 (Kdm4b)
Enzymes [BR:prob01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     127216760 (Kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     127216760 (Kdm4b)
Chromosome and associated proteins [BR:prob03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127216760 (Kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_3 LBR_tudor DUF7141 SLX1_C
Other DBs
NCBI-GeneID: 127216760
NCBI-ProteinID: XP_051033548
UniProt: A0AAU9YW51
LinkDB
Position
Unknown
AA seq 1100 aa
MGSEDHSAQNPSCKIMTFRPTMDEFRDFNRYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDEDVAQWNIGNLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYEQWKQGRDLTVLDHTRPTALSSPELSSWSA
SRASLKAKLLRRQISVKESRPWRKAEEERRPSLERRREPTRRPGPASHRRRSQPKKSKPE
DSKSPGEAATRVAGLDEAGGCSREEATPEDEEEDEELLPSQGHEVEGMEEDGRGKPRPTK
ARSKKKTPNPLSPPLPPTLPALLPPEEVLRPPPPPKSPVPAMGPMAAEGGPPSAPLNVVP
PGAPGEEAEVRPRPIIPMLYVLPRNNTADGDRERTTHPQLAPMELGPEEESQAQASDAQA
PSSFSKLKVEIKKSRRHPLGRPPTRSPLSVVKQEASSDEEAFPFSGEDDVSDPEALKSLL
SLQWKNKAASFQAERKFNAAAALNEPYCAICTLFYPYSQSVQTEREVPATPGDVAVQPPS
KSGQRTRPLIPEMCFTSSGENTEPLPANSYVGEDGTSPLISCAHCCLQVHASCYGVRPEL
AKEGWTCSRCAAHAWTAECCLCNLRGGALQTTTEHRWIHVICAIAVPEVRFLSVIERNPV
DVSAIPEQRWKLKCVYCRKRMKRVSGACIQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYV
VSITCLKHRAGGAGGQLLRTVSLGQVVITKNRNGLYYRCRVIGTTAQTFYEVNFDDGSYS
DNLYPESITSRDCLRLGPPPEGELVELRWTDGNLYRARFISSATSLIYQVEFEDGSQLTV
KRGDIFTLEEELPKRVRSRLSLSTGTPQEPGFSGEDVKAAKRPRVATMLATTTEDTRHSP
EYLAFVENLLQAQGRPGAPF
NT seq 3303 nt   +upstreamnt  +downstreamnt
atggggtccgaggaccacagtgcccagaaccccagctgcaaaatcatgaccttccgcccc
accatggacgagttcagagacttcaacagatatgtggcctacatcgagtcacaaggtgca
caccgcgcaggtctagccaagatcatcccacccaaggaatggaagccacggcagacgtat
gacgacattgatgatgtagtcatcccagcacctatacagcaggtggtgacgggccagtcg
gggcttttcacacagtataacatccagaagaaggccatgaccgtgggcgaataccgccgc
ctggccaacagtgagaagtactgcactccacgccatcaggactttgacgacctggaacga
aaatactggaagaacttgacctttgtctcacccatctatggggccgacatcagtggctca
ctatatgatgaagatgtggctcagtggaacatcggaaacctgaggaccatcctggatatg
gtggagcgtgagtgtggcaccatcatcgagggagtgaacacaccctacctgtacttcggc
atgtggaagaccacttttgcctggcatacagaagacatggacctatacagcatcaactac
ctgcactttggcgagcctaagtcctggtacgccatcccaccggaacacggcaagcgcctg
gagcgcctggccataggcttcttccctgggagctcacagggctgcgatgctttcctgagg
cacaagatgacactcatctcgcccatcatcctgaagaagtatggcatccccttcagccgg
atcacacaggaagccggggagttcatgatcacattcccctatggttaccatgcgggcttc
aaccacggcttcaactgtgctgagtccaccaactttgccacactacgctggatcgactat
ggcaaagtggccacccagtgcacatgtcgcaaggacatggtcaagatctccatggacgtg
tttgtacgcatcctgcagcctgaacgctatgagcagtggaagcagggccgcgacctcact
gtgctggaccacactcggcccacggccctgagcagccctgagctgagctcctggagcgcc
tcccgtgcctcactgaaggccaagctcttgcgcagacaaattagtgtgaaggagagcaga
ccctggagaaaggctgaggaggagaggaggccgagtctagagaggaggcgggagccaacc
aggaggccagggccggcgtcacaccggagacggagccagcctaagaagtccaagcctgaa
gactccaagtctcctggggaggcggccaccagagtggctggtctggatgaggctgggggc
tgttcccgggaggaggccacacctgaggacgaggaagaggatgaagaactattgccctca
cagggccacgaggttgagggcatggaagaggatggcagaggcaagccccggccaaccaag
gcccggagcaagaagaagacccccaaccccctgtcacccccattgccacccaccctacca
gctctattaccccctgaggaggtgctgaggccaccacccccacccaagtctccggtgcca
gccatgggccccatggctgcagaggggggtcctccatcagcacctctcaatgtggtgcct
cctggggcaccaggtgaggaggcagaggtgcggccacggcccatcatccctatgctatat
gtgcttccccggaacaacactgctgatggggacagagagcgcactacccacccacagctg
gcacccatggaactgggaccagaagaggaaagccaggcccaagccagtgatgcacaggca
ccatcctccttctctaagctgaaggtggaaatcaaaaaaagccggcgtcaccccttgggt
cggccacccacacggtccccgctgtctgtggtcaagcaggaggcttcgagtgatgaagaa
gccttcccattctcaggagaagacgatgtgagtgatcccgaggccttgaagtccctgctg
tcactgcagtggaagaacaaggcagccagcttccaagctgagaggaagttcaatgctgca
gctgccctcaatgagccctactgcgccatctgtacccttttctacccctatagccagtca
gtacagacagagcgagaggttccagccactccaggggacgttgctgtccagccaccctcc
aaaagtggccagaggacacggccactgatccctgagatgtgcttcacttcaagtggggag
aacacagagccgctaccggccaactcctatgttggcgaggatggtaccagcccactcatt
tcctgtgcccactgctgcctgcaggtccatgccagttgctatggtgtccggcctgagctg
gccaaggaaggctggacatgctcccggtgtgcggcccatgcctggactgcggaatgctgt
ttgtgcaacctccgggggggagcactgcagacaaccacggagcacaggtggattcatgtg
atttgcgccattgcagtccccgaggtacggttccttagcgtgattgagcgcaatcccgtg
gacgtcagtgccatccccgagcagcggtggaaactgaagtgtgtgtattgccgcaagcgt
atgaagagggtgtctggcgcctgcatccagtgctcctacgaacactgctccacgtccttt
catgtgacctgcgcacatgctgctggcgtcctcatggaacctgatgactggccctacgtg
gtgtccatcacctgcctcaagcacagagcaggtggcgctgggggccagctcctgcgcacg
gtgtccctgggccaggtcgtcatcaccaagaatcgcaatgggctatattatcgctgccgt
gtcataggcaccactgcgcagaccttctacgaggtcaacttcgatgatggctcctacagc
gacaacctgtacccagagagcatcacgagcagagattgcttgcgactagggccgcctccc
gagggtgaactggtggagctgcggtggacagacggcaacctgtatagagccaggttcatc
tcctcagccaccagcctcatctaccaggtagaatttgaggatgggtctcagctgacagtg
aagcgtggggacatcttcaccctggaagaagagctgcccaagagggtgcggtccaggctg
tcactgagcactgggacaccacaggagcctggcttctctggagaggatgtgaaagcggcc
aagcgccctcgagtggccaccatgctggccaccaccaccgaggacacaaggcacagcccc
gaatacctggcctttgtggagaacctgctgcaggcacagggccgacctggggcacccttc
tag

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