Phodopus roborovskii (desert hamster): 127216786
Help
Entry
127216786 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: nephronectin-like
KO
K06824
nephronectin
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04512
ECM-receptor interaction
prob04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127216786
04518 Integrin signaling
127216786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
MAM
cEGF
EGF_3
FXa_inhibition
EGF
EGF_PEAR1L
EGF_MSP1_1
hEGF
EGF_2
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
127216786
NCBI-ProteinID:
XP_051033638
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MAVLLALVLATSLYLQAAANFDGRWPRQIVSSIGLCRYGGRVDCCWGWARQSWGQCQPFY
VLRQRLARIRCQLKAVCQPQCKHGECVGPNKCKCHPGFAGKTCNQDESFYQTPLDQGSEQ
PLFQPRDHQATSVPSRDLNECGLKPRPCKHRCMNTFGSYKCYCLNGYMLMPDGSCSSALS
CSMANCQYGCDVVKGQIRCQCPSPGLQLAPDGRTCVDIDECATGRVSCPRFRQCVNTFGS
YICKCHTGFDLMYIGGKYQCHDIDECALGQHQCSSSARCYNIHGSYTCKCKDGYEGDGLN
CVYIPKVMIEPSGPVHVPERNGTILKGDGGHANRIPDAGSTRWPLKTPHIPPVIANRPTY
RPTTRPTPNPTPQPTPPPPPPHPLPTELRTTPLPPTPERPSTRPTTTAPATSTATRVTTI
DNGLQTDPQKPRGDVFIPRQPSNDLFEIFEIERGISADDEAKDDPGILIHSCNFDHGLCG
WIREKDSDLHWEPIRDPAGGQYLTVSAAKAPGGKAARLVLPLGHLMHSGDLCLSFRHKVA
GLHSGTLQVFVRKHGAHGAALWGRNGGHGWRQTQITLRGADVKSVIFKGEKRRGHTGEIG
LDDVSLKKGHC
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgctcctggcattggtgctcgcgacctcgctctacctgcaggcggccgccaac
ttcgatgggaggtggcccaggcaaatagtttcttcgattggcctgtgtcggtatggtggc
agggttgactgctgctggggatgggctcgacagtcctggggacagtgtcaacctttctac
gtcttaaggcagagactagcaagaataaggtgccagctcaaagctgtgtgtcagccacag
tgcaaacacggagagtgcgtcgggccgaacaagtgcaagtgtcatcccggattcgctgga
aaaacctgcaaccaagatgagtccttctaccaaactcctcttgaccaaggcagtgaacag
cctcttttccaaccccgggatcatcaagccacaagtgtaccttcaagggatttaaacgag
tgtggcctgaagccgaggccctgtaagcacagatgcatgaacactttcggcagttacaag
tgctactgtctcaacggatacatgcttatgccagacgggtcctgctcaagtgcgctatca
tgttccatggcgaactgtcagtatggctgtgatgttgtcaaaggacagatccgatgccag
tgtccttcccctggcctgcagctagctcctgatgggaggacctgtgtggatattgacgaa
tgtgctaccggaagagtctcctgccctcgatttaggcagtgtgtcaacacgtttgggagt
tacatctgcaagtgtcatactggtttcgacctcatgtacattggaggcaaatatcaatgc
cacgacatcgacgagtgcgcccttgggcagcaccagtgcagcagctctgctcgatgttac
aacatccatgggtcctacacgtgtaaatgtaaagatggatacgagggtgacgggctgaac
tgtgtgtacatccccaaggtcatgattgagccgtcaggtccagttcacgtgccggagaga
aatggtacaatcttaaagggtgatggaggacatgctaataggattcctgatgcgggaagt
acgcggtggcccctgaagacaccgcatattcctcctgtcattgccaacaggcccacttat
aggccaacaacaagacctacaccaaatccaactccacagcctaccccacccccaccccca
ccccaccccctcccaacagagctcagaacaactccactaccaccaaccccagaaaggcca
tccaccagaccgactactacagcgcctgctaccagtacagctactcgagttactaccatt
gacaatgggctacagacggatcctcagaaacccagaggagatgtattcattccacggcag
ccttcaaatgacctgtttgaaatatttgaaatcgaaagaggaatcagcgcagatgacgaa
gcaaaggacgacccgggtattctcatacacagttgtaattttgaccatggactttgtgga
tggatcagagaaaaagacagcgacttgcactgggagccaatcagggacccagcaggtgga
cagtatctcacagtgtctgcagccaaagccccagggggaaaagctgcccgcttggtgctg
cctctcggccacctcatgcattcaggggacctgtgcctgtccttcaggcacaaggtggct
gggctgcactccggcacactgcaggtgtttgtgagaaaacatggtgcccacggagcagcc
ctgtggggaagaaatggtggccatggctggaggcaaacccagatcaccttgcgaggggct
gacgtcaagagcgtcatcttcaaaggtgaaaaaaggcgtggccacacaggggagattgga
ttggatgatgtgagcttgaaaaaaggtcactgctga
DBGET
integrated database retrieval system
