Phodopus roborovskii (desert hamster): 127216840
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Entry
127216840 CDS
T08852
Symbol
Prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127216840 (Prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127216840 (Prpf38b)
Spliceosome [BR:
prob03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127216840 (Prpf38b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
127216840
NCBI-ProteinID:
XP_051033657
UniProt:
A0AAU9YXZ5
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Position
Unknown
AA seq
544 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAVAQQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIFLKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHIDSPYIRALGFMYIRYTQPPTDLWDWFEP
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKM
KKDGKEGVEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLDRRHSRSRERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGSDRERDRERSRERSKEQRSRGEGEEKKYKEDKEDRRHRDDKKESK
KKHSRSRSRERKHRSRSRSRNAGKRSRSRSKDKSSKHKNESKEKANKRSRSGSQGRTGSA
EKLRKREYSPSKEKSRKRSRSQERSHKRDHGDGKDQSDRQDHQRSQSVEPESQEKEHKNK
DETM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgaccggcaactcgcaaccgcagcaccaggcggccgcg
gccgtggcccagcagcagcagcagtgtggcggcggcggcgccaccaagccggcggtatct
ggcaagcagggcaacgtgctgccgctgtggggcaatgagaagaccatgaacctcaacccc
atgatcctcaccaacatcctgtcgtcgccttacttcaaagtgcagctttacgagctcaag
acctaccacgaggtggtggacgagatcttccttaaggtcacacatgttgagccctgggag
aaaggaagcaggaaaactgccggccagacggggatgtgcggaggggttcgaggtgttgga
acaggaggcattgtttctacagctttttgcctgttgtacaaattatttaccctgaagtta
actcgaaagcaagtgatgggtctcataacacatatagactctccatatatcagagcactt
ggatttatgtatataaggtatacacagccccctacagacctgtgggactggtttgagccc
ttccttgatgatgaggaggacctagatgtgaaagctggcggaggctgtgtaatgaccatt
ggagagatgcttcgctcctttctcacaaaattggagtggttttctactttgtttccaaga
attccagttccagttcagaagaatattgatcagcagataaaaactcggcctaggaaaatg
aagaaagatggcaaggaaggagttgaggaaatagacagacatgttgagcgaagacggtcc
aggtctccaaggagatcactgagcccacggaggtctccaagaagatcaagaagtagaagt
catcaccgggaaggacatggatcttctagttttgacagagaattagaaagagagaaagaa
cgacagcgactagagcgggaagccaaagagagagagaaggaaaggcgaagatcccgaagt
atcgatcgggggttagaccgcaggcacagccggagtagggaaaggcacagaagtcgcagt
cgaagtcgtgataggaaaggggatagaagagacagggatcgggaaagagagaaagaaaac
gagagaggtcgaagacgagatagagattatgataaggagagaggtagtgatcgagaaagg
gacagggagagatcaagagagcggtccaaggagcagagaagtagaggtgagggagaggag
aagaagtacaaagaagacaaggaggataggcgacacagagacgacaaaaaagaatccaag
aaaaaacacagcagaagtagaagcagagaaaggaaacacagaagtagaagcagaagcaga
aatgcagggaagcggagcagaagcaggagcaaagacaagtcaagcaaacataaaaacgag
agcaaggagaaggcaaacaaaagaagtaggagtggcagtcaaggaagaaccggcagtgct
gaaaaactgaggaaacgagagtacagccctagcaaagagaagtctagaaagcgcagcaga
agccaagagcgctcccataagagagatcatggggatggcaaggaccagtcagacagacag
gatcatcagaggagccagagtgtagagccagagagccaagaaaaggaacataaaaacaaa
gatgagactatgtga
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