Phodopus roborovskii (desert hamster): 127217145 Help Entry 127217145         CDS       T08852                                  Symbol Col4a6 Name (RefSeq) collagen alpha-6(IV) chain   KO K06237   collagen type IV alpha Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04151   PI3K-Akt signaling pathway prob04510   Focal adhesion prob04512   ECM-receptor interaction prob04820   Cytoskeleton in muscle cells prob04926   Relaxin signaling pathway prob04933   AGE-RAGE signaling pathway in diabetic complications prob04974   Protein digestion and absorption prob05146   Amoebiasis prob05165   Human papillomavirus infection prob05200   Pathways in cancer prob05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:prob00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     127217145 (Col4a6)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127217145 (Col4a6)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127217145 (Col4a6)   09142 Cell motility    04820 Cytoskeleton in muscle cells     127217145 (Col4a6)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     127217145 (Col4a6)   09154 Digestive system    04974 Protein digestion and absorption     127217145 (Col4a6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     127217145 (Col4a6)   09162 Cancer: specific types    05222 Small cell lung cancer     127217145 (Col4a6)   09172 Infectious disease: viral    05165 Human papillomavirus infection     127217145 (Col4a6)   09174 Infectious disease: parasitic    05146 Amoebiasis     127217145 (Col4a6)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     127217145 (Col4a6)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:prob04147]     127217145 (Col4a6)    00536 Glycosaminoglycan binding proteins [BR:prob00536]     127217145 (Col4a6) Exosome [BR:prob04147]  Exosomal proteins   Exosomal proteins of other cancer cells    127217145 (Col4a6) Glycosaminoglycan binding proteins [BR:prob00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127217145 (Col4a6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  127217145 NCBI-ProteinID:  XP_051033973 LinkDB All DBs Position Unknown AA seq 1691 aa AA seqDB search MHPGLWLFLASLCLTKELAEAGQKTSYGKPCGGQDCSGGCTCSPEKGTRGRPGPIGTQGP AGPEGFAGPTGLSGLKGERGSPGPLGPYGSKGDKGLMGVPGFVGLSGIPGHPGQPGPRGP PGLDGCNGTQGAVGFPGPDGYSGILGPPGLPGHKGLKGEPAPFQDSITGMKGDPGLPGLD GMAGPSGSPGSPGDAGPTGPPGLQGPPGPAGPSGPDGNMGLGFQGEKGVKGDVGLPGPAG PPPSTGELEFMGFPKGKKGSKGEPGPPGFPGMSGLPGFPEFGSIGEKGEMGILGLPGPRG PVGSEGVQGQQGRQGKKGTSGLPGINGFPGIKGEKGGTGLRGPDIFTDTDGAVIPGYPGD PGVPGLPGLRGDEGIQGQHGPSGTPGLPSLTGLPGALGPRGFPGLKGDQGNPGRTSFGED GLSGKDGLPGLPGLPGPSGPPGRTFENGPLPSIEPGFPGLQGERGPKGHQGLKGVKGDSG FCACEGGAPNIGPHGEPGLPGTQGLIGLPGIKGTRGDPGSRGAPGPAGSPGLFGSRGHTG LKGKKGEPTISIESKLSGDKGDPGPQGTPGMAGAPGKDGIPGLPGLPGIQGDSRSGFPGE KGSPGLPGEKGHDGPTGPPGIGLPGLPGPRGLPGDKGVDGLPGQQGLRGAQGVTLPCIIP GSYGPSGFPGAPGFPGSKGARGLPGTPGKPGTHGSKGESGSPGLIHLPGLPGFPGPRGEK GLPGFPGLPGKDGLPGKAGSPGLPGSQGTTGDIFGAENGASGEQGLQGLPGDKGFPGDSG LPGPKGLNGKSGMLGPKGERGNPGTSGPPGQPGPSGSSDPLGIKGTAGHPGAPGLPGISG KSGKKGQRGDIGQPGSTGKHGLPGIKGLPGSQGSAGFLGSPGLPGVTGFPGIPGQKGERG SSGPVGFPGLPGLPGIPGAGGLKGFPGSFGKVGQPGQAGTPGEKGDRGDPGSIGISSPRP PMLNLWFKGEKGSRGSAGSDGFPGPRGDKGKPGIPGLPGQPGAPGQSNTIKGFNGSPGSP GAVGRIGLPGLKGSLGITGFPGMPGKSGSQGRTGTSGPTGATGIPGLKGDQGQTLGFSGS PGLKGQPGELGFKGVKGKDGIVGDTGFPGNKGDDGKVGIAGDPGLPGSPGLQGISGMSGD PGLQGSPGHLGLVGLPGPSGLRGPKGFSGPPGLHGLNGLPGTKGTHGTPGASITGVPGPA GLPGPKGEKGMPGIVIGEPGKQGSRGQKGDQGFPGLQGPAGLPGAPGISLTSVIAGQPGD PGRPGLDGERGRPGLPGPPGPPGPSSDQGDSGDPGFPGIPGLQGLKGNQGLPGFSGLSGD LGLKGIKGEPGLMGTPGKVGPPGDPGFPGMKGKAGPRGFAGPQGAPGHTPISEAIQVPPG PLGLPGIDGIPGFAGDPGPQGSVGLQGSKGLPGIPGKDGPSGLPGPPGILGDPGLPGLQG PPGLEGAPGQQGPFGRPGLPGHSVRVGYTLVKHSQSEQVPLCPVGMSRLWVGYSLLFVEG QEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQ IPQYISRCAVCEAPSQAIAVHSQDITIPPCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVS PGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERRQFREEPVSETLKTGQLHTR VSRCQVCMKNL NT seq 5076 nt NT seq  +upstreamnt  +downstreamnt atgcacccaggattgtggctgttcctggcttccttatgcctgaccaaagaactagcagaa gcgggacagaagacatcctatggaaagccatgtgggggccaagattgcagtggaggctgt acatgctctccagagaagggaacaagagggcgccctggaccaattggaactcaaggtcca gcgggtcctgaaggatttgctggtcctactggtttatcagggttgaaaggagagagaggc tccccaggccccctgggaccatatggatcaaaaggagataagggtctcatgggagttcct ggctttgttggtctcagtggaattccgggccaccctggacaaccaggtcccagaggtcca cctggcctagatggctgtaatggaactcaaggcgctgttggatttccaggccctgatggc tactctgggattttaggaccacctgggctgcctggtcataaaggtttaaaaggagaacct gctccttttcaagacagcatcacaggaatgaagggggatcctgggctgcccggactggat ggaatggctggtccatcaggatcccccggatctcctggagatgcaggacccacaggacca ccaggcttacaaggtcccccaggccccgctggaccttctggtcctgatggaaatatgggg ttaggtttccaaggagaaaaaggagtcaagggggatgtcggcctccctggccctgcagga cctcctccatctactggggaactggagttcatgggattccccaaagggaagaaaggctcc aagggtgaaccagggcctccaggtttcccgggcatgagtggccttccaggtttcccggag tttggatctattggagaaaaaggagaaatgggaatccttggtttgccaggacctaggggt cccgtgggttcagaaggagtacaaggacaacaagggagacagggaaagaaggggacttct ggtcttcctgggattaacggattcccaggaattaagggtgaaaagggtggcactggtctt cgaggcccagacattttcaccgatacagatggtgctgttatcccaggttatcctggagat cctggtgtgccgggcctcccaggcctaagaggagatgaaggcatccaaggtcaacatggc ccttctggcacccctggcctcccatcactaacaggtcttcctggtgctctggggcctcgg ggatttccaggcctgaaaggagaccaaggaaacccaggacgtaccagctttggggaggat ggcctatctggcaaagatggtttgccaggtttaccaggcctaccaggaccttcaggacca cccggccgcacatttgagaatggacccttacctagcatagagcctgggttcccaggtctc caaggagaaaggggtccaaagggacatcagggcctcaaaggagtaaaaggagactctggg ttttgtgcttgtgaaggtggtgcccctaacattggaccacatggggaaccgggcttgcct gggacacaaggtctcattggccttccgggtattaaaggaactagaggagatccaggctct aggggtgcacctggcccagcagggtctccggggttatttggatctagaggtcatacaggc cttaaagggaagaaaggagaaccaaccatcagcatagaatcaaaactgtcaggtgacaaa ggtgatcctggcccccaggggaccccaggaatggcaggagctccaggcaaggatggaata ccaggtttaccaggcctcccaggcattcagggagatagtagatctggcttcccaggtgaa aaggggtcaccaggacttcctggtgaaaagggacatgatggtccaactggaccaccagga attgggctgccaggacttcctgggccccgtggacttcctggagataaaggagtagatggg ttgccagggcaacaaggcctccgtggagctcaaggagtcaccttaccttgtattatccct gggtcatatggtccatcaggatttcctggagctcctggattcccaggctctaaaggagct cggggcctccctggaactccaggcaagcctggcactcatggaagtaaaggagagtcagga agtccggggttaattcatcttccaggattgccaggatttcctggacctcgtggggagaag ggattacctgggtttcctgggcttcctggaaaagatggcttgcctggaaaggctggcagt ccagggttaccaggttcccagggaaccaccggtgacatcttcggtgctgaaaatggtgct tcaggggagcaaggcctacagggattaccaggggacaaaggatttcctggagactctggc cttccaggacccaagggtttgaatgggaagtctggtatgctaggccccaaaggtgagaga ggcaaccctggaacatcagggccaccaggacagccaggaccctcaggatctagtgatcca cttggcatcaagggcacagctggacacccaggagcaccaggcctgccaggcatttcaggg aaatctggaaaaaagggtcaaagaggagacataggtcaacctgggtcaactggaaaacac ggtctacctggaataaaaggccttcctggttctcaaggttcagctggtttcctgggaagc ccaggtttgccaggagtcactgggtttccaggcatcccaggccaaaagggtgaaaggggc tcctctggaccagtagggtttcctggcttacctggccttcctggtattcctggagctggt ggattaaagggatttcctgggtcatttggaaaggtgggacaacctggacaggctggtact ccaggagaaaaaggagacagaggggatccggggtcaattggcatttccagtccaagacct ccaatgctgaacctttggttcaaaggagaaaaaggttctcgaggttctgctggatcggat ggatttcctggacccagaggtgacaaaggaaagcctggcatcccagggttgccaggccaa ccaggagctcctggacagtccaataccatcaagggattcaatggaagcccaggttcccct ggagctgtgggaagaatcggattacctggcctgaaggggtccctggggatcacaggtttc ccaggaatgccaggaaaaagtggttctcagggtcgcactggaacttctggccccacggga gcaactggtatcccaggtttaaaaggagaccaaggccaaacacttgggttttctggaagc ccagggctcaagggacagcctggtgaattaggttttaaaggtgtaaaaggaaaagatggg atagttggtgacacaggtttcccaggaaacaaaggtgatgatggaaaagttggtattgct ggagaccctggccttcctggctccccaggacttcaagggatttcaggtatgagcggagac ccaggcctccaaggatcccctggacatttggggttagttggcctccctggaccctctggc ttaagaggacctaaaggattctctggacctcctggtttacatggactgaatggacttcca ggcaccaagggtacccatggaactccaggagccagtatcactggtgttcctgggcctgct ggcctgccaggacccaaaggggaaaagggaatgccaggaattgtcattggagaaccagga aaacaaggttcaaggggacaaaaaggtgaccaaggtttcccaggtctccaaggtcctgct ggtcttcccggagccccaggcatctccttgacctcagtcatagcaggacagcctggtgac cccgggcgcccaggcctagatggcgaaagaggccgcccaggccttccaggacctccaggt ccccctgggccatcctcagaccaaggcgactctggagaccctggcttccctggaattcca ggccttcaagggcttaagggaaaccaaggacttccaggtttctctggcctctctggagat ctagggctgaaaggcataaagggggagcctggcctcatggggactcctggcaaggtcggg ccaccaggagacccgggatttcctgggatgaaggggaaggcagggccaagaggctttgcc ggcccccagggtgctccagggcacacaccaatttctgaagctatccaggttcctccaggg cctttgggtcttccaggcattgatggcatccctggcttcgcaggagatcctgggcctcaa ggctctgtgggtctgcaaggttctaaaggtctacctggcatccctggcaaggatggcccc agtgggcttccaggcccacctggaatccttggtgatcctggtctcccaggactacaagga cctccaggattggaaggagctccagggcagcagggtccctttgggaggcctgggttgcct gggcacagtgtgagagtgggctacacactggtcaaacacagtcagtcagaacaggtgccg ctgtgcccagtcgggatgagccggctgtgggtgggttacagcctgttgttcgtggagggc caggagaaagcccataaccaggacctgggatttgctggctcatgcctgccccgattcagc accatgcccttcatctactgcaacatcaatgaagtgtgccactatgccagacgcaatgat aaatcctactggctctctactactgcccccatccccatgatgcctgtgggccagacccag attccccagtacattagccgctgcgctgtatgtgaggcaccctcacaagccattgctgtg cacagccaagacatcaccatcccaccgtgccctttgggctggcgcagcctctggatcggt tactccttcctcatgcacactgctgctggggctgagggtggaggtcaatccctagtctcc cctggttcctgcctggaggacttccgggccactcccttcattgagtgcagcggtgcccgt ggtacttgccactactttgccaacaagtacagtttctggctgacgacggtggaggaaaga cggcagtttcgggaagagcctgtttctgagaccctgaaaactgggcagctccacaccagg gtgagccgctgccaggtgtgtatgaaaaatctgtag

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