Phodopus roborovskii (desert hamster): 127217214
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Entry
127217214 CDS
T08852
Symbol
Lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03018
RNA degradation
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127217214 (Lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
127217214 (Lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127217214 (Lsm4)
03041 Spliceosome [BR:
prob03041
]
127217214 (Lsm4)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127217214 (Lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
127217214 (Lsm4)
Spliceosome [BR:
prob03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127217214 (Lsm4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LETM2_N
Motif
Other DBs
NCBI-GeneID:
127217214
NCBI-ProteinID:
XP_051034075
LinkDB
All DBs
Position
Unknown
AA seq
170 aa
AA seq
DB search
MVVNRRAGLHVCSVEGRVGPSCERHNPSPQFLMLPLSLLKTAQNHPMLVELKNGETYNGH
LVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVREEAAKGRG
RGGPQQQKQQKGRGMGGAGRGVFGGRGRGGIPGAGRGQPEKKPGRQAGKQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaataggagggcgggtcttcatgtgtgctctgtcgaggggcgcgttggccca
agttgtgagagacataatccatctcctcagttcttgatgcttcccttgtcgctgctcaag
acagcgcagaatcaccccatgctggtggagctgaagaatggggagacgtacaatgggcac
ctggtgagctgcgacaactggatgaacatcaaccttcgagaggtgatctgtacatcgagg
gacggggacaagttctggcgaatgcccgagtgctatatccgcggcagcaccatcaagtac
ctgcgcatccctgacgagatcatcgacatggtgcgagaggaggctgccaagggccgtggg
cgaggggggccacagcagcagaagcagcagaaaggccgcggcatgggcggcgctggccga
ggtgtttttggtggccggggccggggtggcatcccaggtgcaggacgaggtcaaccagag
aagaagccagggcggcaagcaggcaagcagtga
DBGET
integrated database retrieval system
