Phodopus roborovskii (desert hamster): 127217248
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Entry
127217248 CDS
T08852
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
prob04990
]
127217248 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
prob04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
127217248 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_IFT140_1st
NACHT
Beta-prop_DCAF4
DUF4062
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
CNH
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_LRRK2
AAA_16
Beta-prop_SCAP
Beta-prop_DCAF12
WDR90_beta-prop_4th
NPHP3_N
AAA_22
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
127217248
NCBI-ProteinID:
XP_051034138
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MGSMSVGPLSPGTRQRLLQGQAVSLPAPSSSRSVAIFISSAISDMDTEREVLQCTAYPEL
RSFCQKHGLTFEVVDLRWGIPNTQATDHLTVELCLEELDRCQKTSIGPAFVALLGDQYGP
CLVPQRIEEKEWEALRAQLTSRPRNLELVARHFRRDDNAIPPTYLLQPPGSVEAPGPEEA
TLTSVLRGGAQEAWRLGLISQEQWECYHRSVIEWEIERGLLSSAPGAQGATVFLRDVQDL
SKHILDDCSLKMVDRLADGCLDTNAQSLLLGLKGRILDAQPGVLKSHRLPWSRDLVNPKN
KAHARYLKELSEQFVARTTHQVLEQLRELESARQELGWLYQEICHHLWRSTESTRIFCGH
QELLAQLGQRLRQDDSQPHTPLVLFGPPGIGRTSLMCKLAEQVPGLLGHKTVAILRLLGT
SKMSLDARSLLRSVCFQLCLAYGLPLPPTQVLEVHARMGHFFHTLLHTVSCRNFESLVLL
LDSVDDLDSICHSWRVSWLPLKCPPRVHIILSTCSGQQVLHTLQQTLKDPSAYWEVKALS
GCQGQELIQLLFAAERRTLSPAQRDILWASLPECGHPGRLRLAFEEARKWVSFTVPVPLA
TTVEEATHQLCIRLEETHGQLLVAHVLGYIVSSRYGLSEAELKDVLSLDDEVLQAVYQDW
TPPSKELLRFPPLLWVRLRRDLAHCLTRRPVDGCTLLAIANRQLSKVIRVRYLSGPEKSK
RHSVLAEFFSGAWSQGTKKLITLPLVGKPLNLDRKVASQPLWFSGTVANWRKLTELPFHL
LHAGHMEELKQEVLGNMDWISCRGISGGIEDLLDDFDMCASHMDSPEVGMVREALQLCRP
AVELRGMENSVLYSELLARLLFFAKSHPVVIGQLCQQAQSWFRACPHPMLVPLAGFLQPP
GGRLQATLTGCHKGITAVAWSLEEKLLVVGTQDGIMTVWDVEEQQVVHILTGHTAEVRCI
RVFAQGTLAISASKDHTLRLWSLLSGQEKVTIVDRGSPNPTESQSGDLHIDEINKVIYSI
SSAKISVWNLETTKLVFCIPGEASDPWACVTLLAAQGVLLAVSKGGEVNVWNSATGKLQG
NRQLSSIREETPTCAVCIQTQAKLVTGFNSGSISLVSSREDSLLEKLPEAVGFLVVSEDE
SVLAAGFGRSVRIFLANSQGFHRFMATDLEHEDVVESAVLGPENNVIITGSRDALIQVWS
LSEQGTLLDVLEGVGAPASLLVRGGTLVVSASWKSSSLKVWDLVSPQKPRPPAPFLDRTG
LTAVSHHGSYIYFPKVGDKNKVTIWDLAEGEEQDFLDTSNEVRCLEVAEQAKLLFTGLIS
GIVLVFPLNSRQDVLCIPPPEARKAVNCMSLSKSEDRLAIAYDNIVLVLDISPGDPCPTI
EGPAYTFYTQLPETIASVAVLADYRVLYGMTDGGLFLYDCARSKVFPLEAHGSRVSCVEV
SHGEQLAVSGAEDALLCLWDLQACRGMFEMIYESSYCRGVRCACFSKDDKYVFAGMKDRS
IIAWSALDGTLLAVQFVHAVVNRIIPTSNGFMAPTSHGYLIRERFQYPSARASQQDPLKN
FKKTVWLVKTRHRKEQLAAAEASQDTGSMATEGKESKSNKHSQVCLIL
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcatgagtgtgggccccctcagccctggcactcgccagcggcttctccagggt
caggccgtctccctcccagcaccctcttccagcaggagtgtggccatcttcatcagttct
gccatctcagatatggacacagagcgagaagttctgcagtgtaccgcctaccctgagtta
cggagcttctgccagaaacacggcttgacatttgaggtggttgatctgaggtggggtatc
ccgaacacacaggccactgaccacttgactgtagaactctgcttagaagaacttgaccgc
tgccagaaaacgtccataggaccagcttttgtggctctcctgggcgaccagtatggcccc
tgcctggttccccaacggatcgaagagaaagagtgggaggcactaagggcccagctgacc
tccaggcctcgaaatctagagctggtggccagacatttccggagagacgacaacgccatc
cctcccacctacttgctgcaacctccaggctccgtggaggccccagggcctgaggaggcc
accttgacctctgtccttcgaggtggagctcaagaagcttggaggctgggcctcatcagc
caggagcaatgggagtgttaccatcgctcagtcattgagtgggagatcgagcggggtctc
ctgagctcagcaccaggggcccagggagccactgtcttcctgagagatgtacaggacctc
agtaaacatatcttggatgattgctctctgaagatggtggatcggctggcagatggttgt
ctagacaccaatgcccagagtcttctccttggccttaagggacgcatactggatgctcag
cctggagtcttaaagtcccaccgactgccctggagccgtgacttggtcaacccgaagaac
aaggctcacgcccgctacctgaaggagctgagcgagcagtttgtggccaggaccacccat
caggtcctggagcaattgcgagagctggagtcagccagacaggagctgggctggctctac
caggagatctgccaccacctctggaggagtacagagtccaccaggatcttctgtggccac
caggagctcctggcccagctagggcagcggctcagacaggatgacagccagccccatact
ccattggttctctttggaccaccaggcatcgggaggacctccctcatgtgcaagctcgct
gagcaggtaccagggctccttggccacaagactgtggccattctgaggctgttggggaca
tcaaagatgagcctggatgcccgaagcctcctcaggagtgtgtgctttcaactgtgcttg
gcctacgggctgccactgcccccaacccaggtcctggaggtccatgccaggatgggccac
ttcttccacactctccttcacactgtgtcctgtagaaactttgagtccttggttttgcta
ctggactcagtggatgatctggattccatatgccattcttggagggtttcctggctgccc
ctcaagtgtcccccaagggtacacatcatcctttctacatgctcaggccagcaggtgtta
cacacactgcaacagaccctcaaggaccccagtgcctactgggaagtgaaggccctgtct
gggtgtcagggacaagagcttatccaactgctatttgctgcggaaaggagaacgctgagc
ccagctcagagggacatcctctgggccagtctcccagagtgtggccacccagggcggcta
aggctggcttttgaggaggcccggaagtgggtctcctttactgtgcctgtgcccttggcc
accacagttgaggaggccacacaccaactctgcatccgcttggaagagacacatggacag
ctgctggttgcccatgtgctgggttacattgtgtcttccaggtacggcctgtcggaggcg
gagctgaaagatgtgctgtctttggatgacgaggtcctgcaggctgtataccaggactgg
acaccgcccagcaaggagctcctgcgttttccacctctactgtgggtgcggctccgccgg
gacctggcacactgcttgaccaggaggcctgtggatggctgcacactgctggccatcgcg
aacaggcagctgtctaaggtgatccgggttcgatacctgtctgggcctgagaaatctaag
agacatagtgtgctagctgaattcttctctggagcctggagtcagggcaccaagaaactt
atcaccctgccacttgtggggaagccactgaacctggaccgaaaggtggcttcgcagcca
ctgtggttctcaggcacagtggccaactggaggaagctgacagaactgcctttccatcta
ctgcatgcaggccacatggaggagctgaagcaggaggtgctggggaacatggactggatc
tcctgccggggtatctctgggggcattgaggacctgctggatgactttgacatgtgtgcc
tctcacatggactctcctgaggttggtatggtcagagaagccctccagctgtgccgtcct
gctgtagagctccggggcatggagaacagcgtgctgtacagcgagctcctggccaggctc
ctcttctttgccaaatcccatccagtggtgattggacagctgtgccaacaagcccagagc
tggttccgtgcctgcccacacccaatgctggtgcccctagcagggttcctacaaccccct
gggggacgacttcaagccactctcactggatgtcacaaaggcatcactgccgtagcatgg
agcctggaagagaagttactggtggtgggcacccaggatggcatcatgacagtatgggac
gtggaggagcaacaggtggtccacattctaacaggacacacagccgaagtgaggtgcatt
cgagtgtttgcccaagggactctggccatctctgcatcaaaggaccacaccctgcgcctg
tggagcttgctctctggccaggagaaagtcaccattgtggacagaggctcgccaaatcct
acagagtctcagagcggggatctccatatagatgagataaacaaagtcatatactccatc
tctagcgcaaagatcagcgtgtggaatctggaaaccacgaagctggttttctgtatccca
ggagaagcctctgatccctgggcctgtgtgacattgctggctgcccagggtgtgctgcta
gccgtgtccaagggtggcgaggtcaatgtatggaactcagccacaggaaaacttcagggg
aatcgccagttgtccagcatcagagaggagacgcccacttgtgccgtctgcatccagaca
caggcaaagctggtcactggcttcaacagtggctccatctccctggtttcctccagagaa
gacagcctgctggagaagcttccagaagctgtggggttcctggtggtgtctgaagacgag
tctgttcttgcagcaggctttggaagatctgtgcggattttcttggcaaactcacaaggc
ttccaccggttcatggccacggatctggaacacgaggacgtggtggagagcgcggttttg
ggtcctgagaacaatgtgattatcactggctcccgggatgcactcatccaggtgtggagc
ctctcagaacaggggaccctgctggatgtcctcgagggcgtgggcgcccctgcaagcctg
ctggtccggggcgggactctggtggtgtctgcatcctggaagtcttcgtctttaaaagtc
tgggatctcgtgtcccctcagaagccgaggcctcctgctccatttctggaccgcacaggc
ctcactgcagtgtctcaccacggcagctacatctacttccccaaggttggggacaaaaac
aaagtcacgatttgggacttggcagaaggtgaggagcaggatttcctggacacatccaat
gaggtccggtgtctagaagtggctgagcaggccaaactcctcttcacaggtctgatttca
gggatcgtgcttgtgttccctctgaattccaggcaagatgtgctgtgcattcccccacct
gaggcccgcaaggctgtcaactgcatgtccctgagcaagagcgaggaccggttggccatc
gcctacgacaacattgttctggtgctggacattagccccggggacccatgtcccaccatt
gagggccctgcctacaccttttacacccaactgcccgagaccatagcgagtgtggccgtg
ctggcagactaccgggtgctctatggcatgaccgacggtggcctctttctgtatgactgt
gcacggtccaaagtgtttcctctggaagcccatgggagcagggtgagctgtgtggaggtc
agccacggggagcagctggcagtgagcggggcagaggatgcactgctctgcctctgggac
ctgcaagcttgcagggggatgttcgagatgatctatgagagctcctactgcagaggggtg
cggtgtgcctgcttctcaaaggatgacaagtatgtgtttgcaggcatgaaggaccgttcc
atcatcgcctggagtgcgctggatggcaccctgctggctgtccagtttgtccatgctgtg
gtcaaccgaatcatccctacctccaatggcttcatggcccccacaagccatggttatctc
atccgagaacgctttcagtacccatcagccagagcctcccagcaagaccctctcaagaac
ttcaagaagacagtgtggttggtgaagaccaggcacagaaaagagcagctggctgcagca
gaggcctcccaggacacagggtcaatggctacagagggaaaggaatcgaaatccaataag
cactcacaggtctgcctgatactgtga
DBGET
integrated database retrieval system
