Phodopus roborovskii (desert hamster): 127217346
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Entry
127217346 CDS
T08852
Symbol
L1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04360
Axon guidance
prob04514
Cell adhesion molecule (CAM) interaction
prob04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127217346 (L1cam)
04517 IgSF CAM signaling
127217346 (L1cam)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
127217346 (L1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127217346 (L1cam)
04090 CD molecules [BR:
prob04090
]
127217346 (L1cam)
04091 Lectins [BR:
prob04091
]
127217346 (L1cam)
Cell adhesion molecules [BR:
prob04515
]
Immunoglobulin superfamily
L1 family
127217346 (L1cam)
CD molecules [BR:
prob04090
]
Proteins
127217346 (L1cam)
Lectins [BR:
prob04091
]
I-type lectins (Siglecs)
127217346 (L1cam)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_5
Fn3_ROS1
Ig_PDGFR_d4
Fn3_VIN3
Ig_C17orf99
Ig_VSIG10L2_N
C1orf162
Motif
Other DBs
NCBI-GeneID:
127217346
NCBI-ProteinID:
XP_051034271
UniProt:
A0AAU9YXJ7
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MGVALRYLWPLLFCSPCLLIQIPDELMEPPVITEQSPRRLVVFPTDDISLKCEARGRPQV
EFRWTKDGIHFKPKEEVGVVVHEAPYSGSFTIEGNNSFAQRFQGIYRCYASNNLGTAMSH
EIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQDERVS
MGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPRLLFPT
NSSSHLVALQGQPLILECIAEGFPTPTIKWLHPSDPMPAHRVIYQNHNKTLQLLNVGEED
DGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQPEITW
SINGMSMDKVNKDQKYRIEQGSLILSNLQPSDTMVTQCEARNQHGLLLANAYIYVVQLPT
RILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGTLGIRD
LQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRNAIEKKGARVTFTCQASFDPS
LQASITWRGDGRDLQERGDSDKYFIDDGQLVIQSLDYSDQGNYSCVASTELDEVESRAQL
LVVGSPGPVSHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWYTLG
KVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDVRGEGN
ETNNMVITWKPLRWMDWNAPQVQYRVQWRPQGKQETWKEQTVSDPFLVVSNTSTFVPYEI
KVQAVNNQGKGPEPQVTIGYSGEDYPQASPELEDITIFNSSTVLVRWRPVDLAQVKGHLR
GYNVTFWWKGSQRKHSKRHVHKSHMIVPANTTSAVLSGLRPYSSYHVEVQAFNGRGLGPA
SEWTFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYLLSYHPLDGESKEQL
FFNLSDPELRTHNLTNLNPDLQYRFQLQATTQQGPGEAIVREGGTMALFGKPDFGNISAT
AGENYSVVSWVPREGQCNFRFHIWFKALPEGKVSPDHQPQPQYVSYNQSSYTQWDLQPDT
KYEIHLMKEKVVLHHLAVKTNGTGPVRVSTTGSFASEGWFIAFVSAIILLLLILLILCFI
KRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYSDNEEKAFGSSQPSLNGDIKPLGSDDS
LADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggctcttcggtacctgtggcctctcctcttctgcagcccctgcctgctcata
cagattcctgacgaattgatggagccacctgtcatcacagaacagtctccacggcgcctg
gttgtcttcccaacagatgacataagccttaaatgtgaggccagaggcagacctcaagtg
gagttccgctggacaaaagatggcatccatttcaaacccaaggaagaagtgggtgtggtg
gtgcatgaggcaccctattctggctcattcaccattgaaggcaacaacagctttgcccag
aggtttcagggcatttatcgctgctatgctagcaataacctaggaactgccatgtctcac
gagatccagcttgtggctgagggtgcccccaagtggccgaaggagactgtaaaacctgtg
gaagtggaagaaggggagtcagtagttctgccttgcaaccctccacccagtgcagcccca
cttaggatctactggatgaacagcaagattttgcacatcaaacaagatgagcgggtgtcc
atgggccagaatggagacctgtattttgccaatgtgctcacctcagacaatcactcagac
tacatctgcaatgctcacttccctgggacccggaccatcattcagaaagaacctattgac
ctccgggtcaagcccaccaacagcatgattgaccggaagccacgcctactgttccccaca
aactccagcagccatctggtagctttgcaggggcagccattgatcctggagtgcatcgct
gagggatttcctacacccaccatcaagtggctacaccccagtgaccctatgccagcacac
cgtgttatctaccaaaaccacaacaagaccctacagctactcaatgtgggtgaggaagat
gatggcgagtatacctgccttgctgagaactcactgggcagtgcacggcatgcctactat
gtcactgtggaagctgccccatactggcttcagaagccccagagtcatttgtatgggcct
ggagaaactgcccgcctagactgccaagtccagggcaggccccagccagagatcacctgg
agtatcaacggaatgtctatggacaaggtgaacaaggaccagaagtaccggattgagcag
gggtctctgattctgagtaacctgcaaccaagtgacacaatggtgacccagtgtgaggcc
cgcaaccagcatgggctcctgctagccaatgcctacatctatgttgtccagctgccaacc
aggatcctaacgaaagacaatcagacatacatggcagttgagggcagcactgcttacttg
ctgtgcaaggcctttggagcccctgttcccagtgtccagtggctggatgaggaaggaacc
acagtgcttcaggatgaacgttttttcccctatgccaatggaaccctgggtatcagagac
ctccaggccaatgacactggacgctatttctgccaggctgccaatgaccagaacaatgtg
accattttggctaatctgcaggttaaagaagcaacccagatcacacaggggcccaggaat
gcaattgagaagaaaggtgcaagggtgacgtttacgtgtcaggcctcttttgacccctct
ttgcaggccagcatcacttggcgtggagatgggagagacctccaggaacgtggggacagt
gacaaatattttatagatgatgggcaactggtcatccagagcttggactacagtgaccag
ggcaactacagctgtgtggccagcactgaactggacgaggtagagagcagggcacagctc
ttagtggtggggagccctggacctgtgtctcacctggaactatctgaccgccacctgctg
aagcagagccaggtgcacttatcttggagccctgctgaagaccacaactctcccattgag
aagtatgacattgaatttgaagacaaggaaatggctcctgagaaatggtacactctgggc
aaggtgccaggaaatcagacctctactacccttaagctgtccccctatgttcactacacc
tttcgggtcactgccatcaacaaatatggccctggggaacccagtcctgtgtctgagact
gtggtcacacctgaggcagccccagagaagaaccctgtggatgtgagaggggaagggaat
gagaccaacaatatggtcatcacatggaagcccctccggtggatggattggaatgctccc
caggttcagtaccgtgtgcagtggcgcccacagggcaagcaggaaacctggaaggaacag
accgtgagcgaccccttcctggtggtgtctaacacttccacctttgtgccttatgagatc
aaagtccaagcagtgaacaaccagggcaagggccctgagccccaggtcaccattggatac
tcgggggaagactacccccaggcgagccctgagctggaagacatcacaatcttcaactca
agcactgtgctggtcaggtggaggcctgtggacttggcccaggttaagggccacctcagg
ggatacaatgtaacattctggtggaaaggcagtcagagaaagcacagcaagaggcatgtc
cacaaaagccacatgattgtacctgccaacaccaccagtgccgtcctcagtggcttgcgt
ccttacagctcttatcatgtggaggtgcaggcctttaatgggcggggtttgggacctgca
agtgaatggaccttcagcactccagagggagtgcctggccaccctgaggcattacaccta
gagtgccagtcggatactagcctgctactgcactggcagccaccactcagccacaatgga
gtactcactggttacctgctatcttatcaccccttggatggggaaagcaaggagcagttg
ttcttcaacctttcggacccagagctccggactcataatctcaccaacctcaacccagat
ctgcagtatcgcttccagcttcaggccaccacccaacagggccctggtgaggccattgtg
cgtgaaggaggcaccatggctctgtttggcaagccagattttggcaacatctctgccaca
gcaggtgaaaactacagtgtggtctcctgggtccctcgagagggccaatgcaatttcagg
ttccacatctggttcaaagccttgccagaagggaaagtgagccctgatcaccaacctcag
cctcagtacgtaagctacaatcaaagctcctacacacagtgggacctacaacctgacacc
aagtatgagatccacctgatgaaggaaaaggtggttctgcaccatctggctgtgaagact
aatggcactggccccgtgcgagtttctactacaggtagcttcgcctctgaaggctggttc
atcgcctttgtcagtgctatcattctcttgctccttatcctgctcatcctctgcttcatc
aaacgcagcaagggaggcaagtactcagtgaaagacaaggaggacactcaggtggattct
gaggcccggcccatgaaagacgagacctttggcgagtacagtgacaatgaagagaaggcc
tttggaagcagccagccatctctcaatggagacatcaaacccctaggcagtgatgacagc
ctggccgattatgggggcagtgtggatgtccagttcaatgaggatggctccttcatcggc
cagtacagtggcaagaaagagaaggaggcagcaggaggcaatgacagctcaggagccacc
tctcctatcaaccctgcagtagccctggaatag
DBGET
integrated database retrieval system
