Phodopus roborovskii (desert hamster): 127217353
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Entry
127217353 CDS
T08852
Symbol
Hcfc1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03083
Polycomb repressive complex
prob04980
Cobalamin transport and metabolism
prob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127217353 (Hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
127217353 (Hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127217353 (Hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
prob01009
]
127217353 (Hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127217353 (Hcfc1)
03029 Mitochondrial biogenesis [BR:
prob03029
]
127217353 (Hcfc1)
Protein phosphatases and associated proteins [BR:
prob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127217353 (Hcfc1)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
127217353 (Hcfc1)
HMT complexes
COMPASS/SET1 complex
127217353 (Hcfc1)
MLL-HCF complex
127217353 (Hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
127217353 (Hcfc1)
Mitochondrial biogenesis [BR:
prob03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
127217353 (Hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_1
Kelch_4
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
127217353
NCBI-ProteinID:
XP_051034284
LinkDB
All DBs
Position
Unknown
AA seq
2088 aa
AA seq
DB search
MASAVSPASLPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPTVQPLTQVGITLVPQAATAPPSTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPAGQAGKAPVTVTSLPASVRMVVPTQSAQGTVIGSN
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTMPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGAH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHTQPTQVQFVCDRQEAAASLVTSAVGQQNGNVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCTNPPCETHETGTTSTATTAMSSMGTGQQQDTRRTSS
NPTLVRITVAPGSLERTQGTVKPQCQIQQTNITNSTMTVQATGAPCPAGPLLRPSVALEA
GSHSPAFVQLALPSVRVGLSGPSSKDMPKGHQLETYHTYTTNTPTTALSIMGTGELGTAR
LIPTSTYESLQASSPSSTMTVTALEALLCPSATVTQVCSNPPCETHETGTTNTATTSNAG
SAQRVCSNPPCETHETGTTHTATTATSNGGAGQPDGGQQPASGRPCETHQTTSTGTTMSV
SVGALLPDATPSHGTLESGVEVVAVPTVTSQAGTTLLASFPTQRVCSNPPCETHETGTTH
TATTVTSNMSSNQDPPPAASDQGEVVSTQGDSANISSGITTTVSSTLPRAVTTVTQSTPV
PGPSVPNISSLTETPGALTSEVPIPATITVTIANTETSDMPFSAVDILQPPEELQVSPGP
RQQLPPRQLLQSASTPLMGESSEVLSASQTPELQAAVDLSSTGDPSSGQEATSSAVVATV
VVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAAAQAAATEEA
QALAIQAVLQAAQQAVMAGTGEPMDTSEAAATVTQAELSHLSAEGQEGQATTIPIVLTQQ
ELAALVQQQQQLQEAQAQAQQQHHLPTEALAPADSLNDPSIESNCLNELASAVPSTVALL
PSTATESLAPSNTFVAPQPVVVASPAKMQAAATLTEVANGIESLGVKPDLPPPPSKAPVK
KENQWFDVGVIKGTSVMVTHYFLPPDDAVQSDDDSGTVPDYNQLKKQELQPGTAYKFRVA
GINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYL
AIQSSQAGGEPKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIFRIAARN
EKGYGPATQVRWLQETSKDSSGTKPASKRPMSSPEMKSAPKKSKADGQ
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgctgtgtcgcccgccagcttgccagcggtgcttcttcagccccgttggaag
cgagtggtgggttggtcgggtcccgtgccccgaccgcgccacggccaccgtgccgtggct
atcaaggaactcatagtggtgtttggcggcggtaacgaaggaatagtggacgaactacac
gtgtacaacactgcgaccaaccagtggttcatcccagctgtgagaggggatatccctcca
gggtgtgcagcctatggctttgtgtgtgatggtactcgcctactggtatttggtggaatg
gtggaatatgggaaatacagcaacgacctctatgaactccaggccagtcgctgggaatgg
aagagactgaaagccaagacacccaaaaatgggcctcctccatgtcctcggcttggacac
agcttctcccttgtgggcaacaaatgctacctatttgggggtctagccaatgatagtgaa
gaccccaagaacaacattccgaggtacttgaatgacttatatatcctcgaactgcggcca
ggatctggagtggttgcttgggatatccccatcacttatggagtcctgcctcctcctcgg
gagtctcatactgctgtggtctacactgagaaagataacaaaaaatccaagctggtgatc
tatggagggatgagtggctgcaggctaggggacctttggaccctggacattgaaacactg
acatggaataagcccagccttagtggggtggcaccccttcctcgaagcctccattctgca
accaccataggaaacaaaatgtatgtatttggtggctgggtgcctcttgtcatggatgat
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacgctggcttgtctcaac
ctggataccatggcctgggaaactatcctgatggatacactggaagacaacattcctcga
gctcgagctggtcattgtgccgttgccatcaatactcgtttgtacatttggagtggtcgt
gatggctatcgcaaggcctggaacaaccaggtctgctgcaaggacttgtggtatctagaa
acagaaaaaccaccacccccagcccgagtacaacttgtacgagccaacactaactcactg
gaggttagctggggtgcagtggcaacagccgacagttaccttctgcaactccagaaatat
gacattcctgccacggctgctacggccacttcccctactcccaatccagtcccatctgtg
cctgccaaccctcccaagagccctgcacctgcagcagctgcacctactgtacagccactg
acccaagtaggcatcacacttgtgccccaggctgccactgcacccccaagcactaccacc
atccaggtcttgccgacagtaccaggcagctctatttctgtgcccactgcagccaggact
caaggtgttcctgctgttctcaaagtgactggtcctcaggctacaacaggaactccactg
gttactatgaggcctgctggccaggctggaaaagcccctgtcactgtgacctccctgcct
gctagtgtgcgaatggttgtacccacacagagtgcccaggggacggtgattggcagcaac
ccacagatgagtgggatggctgcattggctgctgctgctgctgccacacagaaaatccct
ccttcctcggcacccacagtgctgagtgtcccagcaggcaccaccattgtcaagacagtg
gctgtgacacctggcacaaccactcttccagccactgtgaaggtggcctcctcccctgtc
atggtgagcaacccagccactcgaatgctaaagactgcagctgcccaagtggggacatct
gtctcctctgctgccaacacatctacccgccctatcatcacggtacataaatcaggcact
gtgacagtagcccagcaagcccaggtagtgaccacagtggttggcggagtcaccaagacc
atcaccctagtgaagagccccatctctgtcccaggaggcagtgctctgatttccaatctg
ggaaaagtgatgtcagtggtccagaccaaaccagttcagacttcagcagtcacaggccaa
gcttctacaggccctgtgactcagattatccagaccaaagggcctctgccagcagggact
atcctgaagctggtgacatcagcagatggcaagcccacaaccatcatcaccaccacacag
gctagtggggcagggaccaagcctaccatcctgggcatcagtagtgtctctcccagcacc
accaaacctggcacaactaccatcatcaagaccattcccatgtcagccattatcacccag
gcaggcgccacaggtgttaccagcagtcctggcattaagtcccccatcacaattatcacc
accaaggtgatgacttctggaacaggagcacctgccaaaatcatcactgctgtccccaag
attgctactggtcatgggcagcaaggagtgacccaggtggtgctgaagggagcccctgga
cagccaggcaccatcctccgcactatgcccatgggtggtgttcgcctggtcacacctgtt
accgtctctgccgttaagcctgctgtcaccacattggttgttaagggcaccacaggtgtc
acaaccctaggcacagtgacaggcactgtctctactagccttgcaggagctggggcccat
agcaccagtgcctctctggccacacctatcaccaccttgggcaccattgccactctctca
agccaggtgatcaaccctactgccatcacagtgtcagctgcacagaccacgctgacagct
gctggtgggctcaccacacccacaatcacaatgcagcctgtctcccagcctacccaggtg
actctgatcacagcacccagtggggttgaggcccagcctgtacatgatcttcctgtatcc
attttggcctcacctactacagagcagccaacggcaacagtcaccatcgctgactcaggc
cagggtgatgtacagcctggcactgtgacactggtgtgctccaacccaccctgtgagacc
catgaaacaggcaccaccaatacagctactaccactgtcgtggctaaccttggaggacat
actcagcctacccaggttcagtttgtttgtgacagacaagaagcagctgcttctcttgtg
acctcagctgtgggacaacagaatggtaatgtggtccgtgtctgttcaaaccccccttgt
gagacccatgagacaggtactaccaacactgccacaacagccacttccaacatggctggg
cagcacggctgcacaaaccccccctgtgagactcatgagacaggcaccaccagcactgcc
actacagcaatgtccagcatgggcactgggcagcagcaagacactcgtcgtacctctagc
aatcccactctagtgcggatcactgtggctcctgggtcactggagagaacccagggtact
gtgaagcctcagtgccaaatacaacagaccaatattaccaacagtaccatgactgtgcag
gctacaggagctccgtgcccagctggcccactgctcaggcccagtgtggcactggaggct
gggagccatagccctgcctttgtacagctagcccttccaagtgttagagttgggctgagt
ggccccagcagcaaggacatgcctaaaggccaccagctagagacatatcatacttacaca
accaatactccaaccacagccctgtctattatgggtactggggagcttggtacagcacgc
ttgatccccacatctacatatgagagcctccaggcaagctctcccagcagcaccatgact
gtgacagctctggaggcactactgtgcccttcggctaccgtgacccaagtctgctccaac
ccaccatgtgagacccatgagacgggcaccaccaacactgccactacctccaatgcaggc
agtgcccagcgggtatgttccaatccaccgtgtgagactcatgaaactggaaccacacac
acagccaccactgccacatcaaatggaggtgcaggccagcctgacggtggacaacagcct
gccagtggccgtccctgtgagacacaccagaccacttccactggcaccactatgtcagtc
agtgtgggtgccctgcttcctgatgccactccctctcatggaaccttggagtctggcgta
gaggtggtagcagtacctaccgtcacctcccaggctggtaccacattgctggcttctttc
ccaacacagagggtgtgctccaaccctccttgtgagacccacgagacaggcaccacacac
acagccaccactgtcacctctaacatgagctcaaaccaagaccctccaccagctgccagt
gaccagggagaagtggtgagcacccaaggtgacagcgcaaatatcagcagtggtatcaca
acaactgtgtcatccactctgccacgagcagtgaccactgtgacacagtctacaccagtg
ccaggtccttctgttccgaacatctcatcattgactgagaccccaggggctctgacttcc
gaagtccccatcccagccacgataacagtgaccatagccaacacagaaacttctgacatg
cccttctctgctgttgacatcctgcagcccccagaggaactccaggtctcaccagggcct
cgccagcagctgccaccacggcaactcctgcagtctgcctccacccccctgatgggggag
tcctccgaggtcctgtcagcttcccagacccctgagctccaggccgccgtggatctgagc
agcactggggacccatcttcaggccaggaggctaccagctctgctgttgtggccactgta
gtggttcagccacccccacccacacagtctgaagtagatcagttatcacttccccaagag
ctgatggctgaggcccaggcgggtaccaccacccttatggtaacagggctcaccccagag
gagctggctgtgacagcagcagctgaagcagctgcccaggctgcagccactgaagaagct
caagccttggccatccaggctgtgctccaggctgcacagcaggctgttatggcaggcact
ggggaacccatggatacatctgaagcagcagcaacagtgacgcaagcagaactgagtcac
ctttcagctgagggccaagagggtcaggctaccacaatacccattgtgctgacacagcag
gaacttgcagccctggtgcagcagcagcaacagctccaagaggctcaagctcaagcacag
cagcaacaccacctacctactgaggctctggccccagctgacagtctcaatgacccatcc
attgagagcaactgcctcaacgagctagctagtgctgtccctagcactgtggccttgcta
ccctcaacagccactgagagcctggctccatctaacacatttgtggctccccagcctgtt
gttgtagccagcccagcaaagatgcaggctgcagctaccctgactgaagtggccaatggc
atcgagtccctgggtgtgaaaccagacttgccacctccacccagcaaggctcctgtgaaa
aaggagaaccagtggtttgatgtaggggtcattaagggtaccagtgtaatggtaacacac
tattttctgccaccagatgatgctgttcagtcagatgatgactcaggcacagttccagac
tataaccagctgaagaagcaggagctacagccaggcactgcctataaatttcgtgttgct
ggaatcaatgcttgtggccgggggccctttagtgagatctcagcctttaagacatgtcta
cctggcttcccgggggctccttgtgccattaaaatcagcaagagcccagatggtgctcac
ctcacctgggagccaccgtctgtgacctccggcaagatcatcgagtattctgtgtacctg
gccatccagagctcacaggctggtggtgagcccaagagctctaccccagcccagctagcc
ttcatgcgagtgtactgtgggcctagcccttcctgcctcgtgcagtcctccagcctctcc
aatgcccacattgactacaccaccaagcctgccatcatcttccgcattgctgcccgcaat
gaaaagggctacggccccgctacacaagtgaggtggttgcaagaaaccagtaaagacagc
tcgggcaccaagccagccagcaagcggcccatgtcgtctccagaaatgaaatctgctcca
aagaagtctaaggctgatggccagtga
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integrated database retrieval system
