Phodopus roborovskii (desert hamster): 127217756
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Entry
127217756 CDS
T08852
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04517
IgSF CAM signaling
prob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127217756 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127217756 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
prob04812
]
127217756 (Sptbn1)
Cytoskeleton proteins [BR:
prob04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127217756 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
127217756 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
127217756
NCBI-ProteinID:
XP_051034715
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHKKN
REAASELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTALHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEEASSSQQWDTSKGDQVSQNGLPAEQGSPRMAETMDTSEMVNGAAEQRTS
SKESSPIPSPTSDRKAKSALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSR
SWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAVCEVALDYKKKKHVFKLRLN
DGNEYLFQAKDDEEMNTWIQAISSAISSDKHDLSASTQSTPASSRAQTLPTSVVTITSES
SPGKREKDKEKDKEKRFSLFGKKK
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccacagtagccacagactatgacaacattgaaatccagcagcagtacagtgat
gtcaacaaccgctgggatgtggatgactgggacaatgaaaacagctctgcacggctcttt
gagcggtcccgtatcaaggccctggcagatgagcgtgaagccgtacagaagaagaccttt
accaaatgggtcaactcccaccttgcccgggtgtcctgccgaatcacagacctgtacact
gaccttcgagatggacggatgctcatcaagctgctggaggtcctttccggagagaggctg
cctaaacccacgaagggacggatgcgcatccattgtctggagaatgtagacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatgggttcccatgacattgtggat
gggaaccaccggctgaccctcggcctcatctggaccatcatcctacgtttccagatccag
gacatcagtgtggagactgaagataacaaagagaaaaagtctgccaaggatgcattgctg
ctgtggtgccagatgaagacagctgggtaccccaatgtcaacatccacaatttcaccact
agctggagggatggcatggcctttaatgctctcatacacaaacaccggccagacctgata
gactttgataaactgaagaaatccaatgcacactacaatctgcagaatgcatttaacctg
gcagagcagcacctcggcctcactaaactgttggaccctgaagacatcagcgtggaccac
cctgatgagaagtctatcatcacatatgtggtgacctactaccattacttctctaagatg
aaggccttggctgttgaaggaaagcggattgggaaggtgcttgataatgctattgagaca
gagaagatgattgagaagtatgagtcgcttgcctctgaccttctggagtggattgaacaa
accatcattattctgaacaatcgaaaatttgctaattctctggttggggtccagcagcag
cttcaggcattcaatacttaccgcacagtggaaaaaccacctaagtttactgagaagggg
aacttggaggtgctacttttcacaattcagagcaagatgagagctaataaccagaaggtc
tacatgccccgggaagggaagctcatctctgacatcaacaaggcctgggaaagactggaa
aaagccgaacatgagcgagaactggctcttcggaatgagctcataaggcaggaaaaactg
gaacagcttgcccgcagattcgaccgaaaggcagctatgagggagacatggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcctgctgttgaagctgcc
accaaaaaacacgaggccattgagacagacattgctgcatacgaagaacgtgttcaggct
gtggtggctgtggccagggaacttgaagcagagaactaccatgacattaagcgcattaca
gcgaggaaggacaatgtcattcggctctgggaatacttgctggaattgctcagggccagg
agacagcgtcttgagatgaacctgggcctgcaaaagatattccaggaaatgctttacatt
atggactggatggatgaaatgaaggtgctattgctatctcaagactatggcaaacacttg
cttggtgtagaagacctgttacagaagcatgccctggttgaagcagacattgcaatccaa
gcagagcgtgtaagaggtgtgaatgcctctgcccagaagtttgcaacagatggggaaggc
tataagccctgcgacccccaggtaatccgagaccgtgttgcccacatggagttctgctat
caagagctgtgtcagctggcagctgagcgtagggctcgcttggaagagtctcgtcgcctc
tggaagtttttctgggaaatggcagaagaagaaggctggatacgggaaaaggagaagatc
ctgtcctctgatgattatgggaaagacttaaccagtgtcatgcgcctgctgagcaaacat
cgggcatttgaggatgagatgagtggccgcagtggccactttgagcaggccattaaagaa
ggtgaagacatgattgcagaggaacactttggatcagaaaagataagagaaagaatcatt
tatatccgggagcagtgggccaacctggagcagctctcagccattcggaagaagcgccta
gaagaggcttcattactgcaccagttccaggctgatgctgatgacattgatgcttggatg
ctagatatcctcaagatcgtctccagcaatgatgtgggccatgacgagtactccacacag
tctctggtcaagaagcataaagatgtagcagaagagatcaccaactataggcccactatt
gacacactgcatgagcaagccagtgcccttccccaagcacatgcagagtctccagatgtg
aggggccgtctggcaggaattgaggaacgctacaaggaggtggcagagctaacacgccta
aggaagcaggctctgcaggataccctggccctgtacaagatgttcagtgaggctgatgcc
tgtgagctctggattgatgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaagtcatccagcatagatttgagagcctagaacctgaaatgaacaac
caggcttcccgggttgctgtggtaaaccagattgcacggcagctgatgcacagtggccac
cccagtgaaaaggaaatcagagctcaacaggacaaacttaacacgaggtggagccagttc
agagaactggtggacaggaaaaaggatgctctgctatctgctctgagcatccagaactac
cacctcgagtgcaatgaaaccaagtcctggatccgtgaaaagaccaaggtcattgagtct
acccaagaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgactggc
atggaacgagacttggtggccattgaggcgaagctgagcgacctgcagaaggaagccgag
aagctggagtctgagcaccctgaccaggctcaagccatcctgtctcggctggccgagatc
agtgatgtatgggaggaaatgaagacaaccctgaagaaccgagaggcctccctgggagag
gctagcaagctgcagcagttcctgcgggacttggatgacttccagtcttggctctccagg
acccagactgctatcgcctcagaggacatgcccaacaccctgactgaggcagagaagctt
ctcacacaacatgagaacatcaaaaatgagattgacaattatgaggaagactaccagaag
atgagggacatgggtgagatggtcacccagggacagactgatgcccagtacatgtttctg
cgacagcggttgcaggccttagacactggctggaatgagctccacaaaatgtgggagaac
agacaaaatcttctctcccagtcccatgcctaccagcagttccttagggacacgaaacaa
gctgaagcttttcttaataaccaggagtatgttttggctcatactgaaatgcccactacc
ctggaaggagctgaagcagctattaaaaaacaggaggacttcatgaccaccatggatgcc
aatgaggagaagatcaatgctgttgtggagacgggccgaaggctggtgagcgacgggaac
atcaactcagatcgtatccaggagaaggtggactctattgatgatagacacaagaagaat
agagaggcagccagtgaacttctgatgagattgaaggacaaccgagatctacagaaattt
ctgcaagattgtcaagagctatccctctggatcagtgaaaagatgcttacggcccaggac
atgtcttacgatgaagccagaaacctgcacagtaaatggctaaagcatcaagcgtttatg
gcagagcttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagccagaaacagaagctgtggtgaaggagaaactcactgctttgcataaa
atgtgggaagtccttgagtccaccacccagaccaaagctcagaggctctttgatgcaaat
aaggctgagcttttcacacagagctgtgcagatctagacaaatggctccatggtctggag
agccagattcagtctgacgactatggcaaagatcttaccagcgtcaatatcctgctaaaa
aagcaacagatgctggaaaatcagatggaagtgcggaagaaggagatcgaggagctccag
agccaagcccaggccctgagtcaggaggggaagagcacagatgaggtggacagcaagcgc
cttactgtgcagaccaagttcatggagcttctggagcccttgaatgagaggaagcataat
ctgctagcatccaaagagatccatcagttcaacagggatgtagaggacgaaattctgtgg
gttggtgagaggatgcctttggcaacttccacagatcatggccataaccttcaaactgtg
cagctattaataaagaaaaatcagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagtcaaaacatcatcacagacagcagcagcctcaacgct
gaggctatcaggcagaggcttgctgacctgaagcagttgtggggcctccttattgaggag
acagagaaacgccatagacggcttgaagaggcacacaaggcccaacaatactactttgat
gcagctgaggcagaggcttggatgagtgagcaggaactgtacatgatgtctgaggaaaag
gccaaggatgagcagagtgctgtctctatgttgaaaaagcatcagattttggaacaggct
gttgaagactatgcagagactgtgcaccagctctccaagactagccgggccttggtggct
gacagccatcccgaaagtgagcgtattagcatgcggcagtcaaaagtggataagctgtat
gccggcctgaaggaccttgctgaagaaagaagaggaaaacttgacgagaggcacaggcta
ttccagctcaacagggaggttgatgacctggaacagtggattgctgagagggaagtggtc
gcaggatcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacgattc
cgagaatttgctcgagatacaggaaacattgggcaggagcgtgtggatacagtcaatcat
atggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaa
gatggtctcaatgaagcctgggcagacctcctggagctcattgacacaagaacacagatt
cttgctgcctcctatgaactgcataagttttatcatgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacactgtggag
accctacagagaatgcataccacctttgagcatgacatccaggctctaggcactcaggtg
aggcagctgcaagaggatgcagcccgcctccaggcagcctatgcaggagacaaggctgat
gacatccagaagcgtgagaatgaggtcctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctggtggacacaggagacaagtttcgcttcttcagcatggtt
cgtgacctcatgctctggatggaagatgtcatccggcagattgaggcccaggagaaacca
cgggatgtgtcatctgttgaattgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgtaatgacagtttcacaacttgcattgaacttgggaaatccctgttggcaagg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgacagaaaaaagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaagtccat
cagttctcaagagatgccagtgtggctgaggcttggctgcttggacaggagccgtatcta
tccagccgtgaaattggccagagtgtggatgaagtggagaaactcatcaagcgccacgag
gcatttgaaaagtctgcagcaacctgggatgagagattctctgcactggaaaggctgaca
acattggagctactggaagtgcgcagacagcaagaggaagaagaaagaaagagacgaccc
ccttctccagagccaagcacaaaggtttcagaggaggcttcttcgtcccagcagtgggat
acttcaaaaggagaccaagtttcccagaatggtttgccagctgaacagggatctccacgg
atggcagaaaccatggacacaagtgaaatggtcaacggtgctgcagagcagaggacaagc
tccaaagagtccagtcccattccctctcccacctctgaccgaaaggccaagtctgcactt
cctgcccagagtgctgccaccctgccagccaggacacaagagacaccagcagcccagatg
gaaggcttcctcaatcggaagcatgagtgggaggcccacaataagaaagcctcaagcagg
tcctggcacaatgtctattgtgtcataaataaccaagaaatgggcttctataaagatgcc
aagagtgctgcttctggcatcccctaccacagtgaggtccctgtgagtttgaaagaagct
gtctgtgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaaat
gatggcaacgagtacctcttccaagccaaagatgatgaggaaatgaacacatggatccag
gccatctcttccgccatatcttctgacaaacatgacctctccgccagcacccagagtacg
ccagcatccagccgggcgcagaccttacccaccagcgttgtcaccatcaccagcgagtct
agtcccggcaagagggagaaggataaagagaaagacaaagagaagcggttcagccttttt
ggcaaaaaaaagtga
DBGET
integrated database retrieval system
