Phodopus roborovskii (desert hamster): 127218221
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Entry
127218221 CDS
T08852
Name
(RefSeq) protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127218221
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
prob01009
]
127218221
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127218221
Protein phosphatases and associated proteins [BR:
prob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127218221
Cell adhesion molecules [BR:
prob04515
]
Cadherins
Protocadherins
127218221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
LYRIC
ROH1-like
EphA2_TM
DUF6377
SPAR
Motif
Other DBs
NCBI-GeneID:
127218221
NCBI-ProteinID:
XP_051035205
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTVREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVLDARCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPTTVINISIPENSAINSRYSLPAAIDPDIGINGVQNYQLIK
SQNIFGLDVIETPEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFIEKEIEVSIPENAPIGSSVTQLHATDADIGENARIHFYFSNLVSNIAKRLF
HLNTTTGLITVKEPLDREESPSHKLLVLATDGGSTPARAMVLVNVTDINDNVPSIDIRYI
VNPTNGTVLLSENAPLNTKIALITVMDKDSEHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAFLDFESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPLFTQSFISLSVPENNS
PGAQLTKISATDADSGHNAEINYLLGFDAPPEFDLDSRTGILTAVKKLDREKQEKYYFTV
LAQDNGYPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSILDMKDQFTIDPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSHSSTAKVT
INVVDVNDNKPIFIDPPSNYSFEWVLPSTMPGTVIFKVVAIDNDIGMNAEIRYSIVGGNT
KGLFMIEQVSGNMTLKEKCVVSDLGLHRVIVKAMDLGQPDSLFSFVNVNLFVNESVPNAT
LIYELVRKSIDSPATQNPETTNASTPTTDYVKIMVAIVAGTITVVLVIFITAVVRCRQSP
HLKASQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKNAPKNLLLNFVTIEEAKQDDADND
RNSVTLELPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSK
HHIIQELPLDNTFVGCDSFSKCSSSSSDPYSVSECSYPVTTFKTPVSVHARPTMKEVIRS
CTPMKEVTTVEIWTQPHPQ
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgtgtcgtgtttcag
tctggcgcccaggagaagaattatactgtccgagaagaaatgccagagaacgtcctgata
ggcgacttgttgaaagacctcaacttgtcgcttattcccgacaagtccttaaccactcct
atgcagttcaaattggtatacaaaaccggggatgtaccactgattcggattgaagaaggt
actggtgagatcttcactactggcgctcgcatagatcgtgagaaattatgtgctggaata
gtgttggatgcccgttgcttttacgaagtggaggttgctgttttgccagatgaaattttt
agactggttaagatacgatttctgatagaagatataaatgataatgcaccgttattcccg
acaactgtcatcaacatatcaattccagagaactcggctataaactccaggtattctctt
ccggcagccattgatcctgacattggaataaatggagtccaaaactaccaactaattaag
agtcaaaatatttttggtcttgatgtcattgaaacaccagaaggagacaagatgccacag
ctgattgttcaaaaggagttagatagagaagagaaagatacctatgtgatgaaagtaaag
gttgaagatggtggatttcctcaaagatctagtacagctattttgcaagtaagtgttgct
gatacaaatgacaaccgtccagtcttcatagagaaggaaattgaagtcagtataccagaa
aatgctcctataggttcttcggtgacacagctccatgcaacagatgctgatataggtgaa
aacgccagaattcacttttatttcagtaatctagtctccaacattgctaagagactgttt
caccttaataccacaactggacttatcactgtgaaagaaccgctggatagggaagaatca
ccaagccacaagctactggttttggcaactgatgggggatcaacaccagcaagagctatg
gtgcttgtaaatgttacagatatcaatgataatgtcccatcaattgacataagatacatt
gtcaatccaaccaatggcactgtgcttctttcagagaatgctccacttaacacgaaaatt
gctctcataactgtgatggataaggattctgaacataatggtagggtgacatgcttcaca
gatcatgaagttcctttcagattacggccagtatttagtaatcagttccttttggaaacg
gctgcttttcttgactttgagtccacaagagaatatgccatcaaattgcttgctgctgat
gctggcaaacctcctttgaatcagtcatccatgctcctgattaaagtaaaagatgaaaat
gacaatgccccactttttacccagtctttcataagcctttctgttccagagaataactct
cctggtgcacagttgacaaaaatcagtgcaacagatgcagacagtggacacaatgctgaa
ataaactacctgctaggttttgatgcaccacctgaatttgacctggatagtcgaacaggc
atcctgactgcagtaaagaaactagatagagaaaaacaagaaaaatattactttacagtt
cttgcacaggacaatggatatccacccttaatgtcaaatgccactgtttttgtgactgtt
cttgaccagaatgataacagcccaattttcactcacaatgagtacaacttctatgtgcct
gagaaccttccaagacatggcacagtagggctgataactgtcactgatcctgattatgga
gagaattctgcagttaccctctccatcttagatatgaaggatcaattcactattgatcca
cagactggtgtcatccgaccaaatatttcatttgacagagaaaaacaagaatcctacact
ttctatgtaaaggccgaggatggtggtagggtatcccattcttcaactgctaaagtaacc
ataaatgtggttgatgtcaatgataacaaaccaatatttattgaccctccttccaattat
tcctttgaatgggttctaccatccacaatgcctggtacagtcatcttcaaggttgttgca
attgacaatgatattggcatgaatgctgagattcgttacagcattgttggaggaaacacc
aaaggactgtttatgatagaacaagtatcaggcaatatgacattgaaagagaaatgtgtt
gtttcagatcttggtttacacagagtgatagtcaaagctatggatttaggacaacctgat
tctctcttcagttttgttaatgtcaatctgtttgtgaatgagtcagtgccaaatgctaca
ctgatttatgaactggtgcgcaaaagcatcgactcacctgcgacccaaaaccctgaaaca
actaatgcatccacaccaacaactgattatgtcaagatcatggttgccattgttgcgggc
accataactgtcgtcctagtgattttcatcactgcagtagtaagatgtcgccagtcacca
caccttaaggcttctcagaaaaacaaacaaaattctgaatgggttactccaaacccagaa
aacaggcaaatgattatgatgaagaagaagaaaaagaaaaagaagaagaatgcccccaag
aatctgctacttaattttgttactattgaagaagcaaaacaggatgatgctgacaatgat
agaaacagtgtcacactagaacttcccattgagctggaagagcaaaccatgggaaaatac
aactggggcactacacctactactttcaaacctgacagtcctgatttggctagacactac
aaatctgcctctcctcagcctgcattccagatccagcctgaaacacccctgaactcaaag
catcacatcattcaggaactgcctcttgataatactttcgtaggctgtgattccttctct
aagtgctcctcaagcagttctgatccctacagtgtttctgagtgcagctatccagtgaca
accttcaagacccctgtgtctgtacatgctagaccgacaatgaaggaggtgatacgatct
tgcacccctatgaaagaggtaacaactgtggaaatctggactcagcctcatccacag
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integrated database retrieval system
