Phodopus roborovskii (desert hamster): 127218298
Help
Entry
127218298 CDS
T08852
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03410
Base excision repair
prob04140
Autophagy - animal
prob04217
Necroptosis
prob04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127218298
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127218298
09143 Cell growth and death
04217 Necroptosis
127218298
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
127218298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127218298
03400 DNA repair and recombination proteins [BR:
prob03400
]
127218298
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prob04147
]
127218298
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
127218298
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127218298
MMR (mismatch excision repair)
Other MMR factors
127218298
Exosome [BR:
prob04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127218298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
127218298
NCBI-ProteinID:
XP_051035299
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MGKGDPKKLRGKMSSYAFFVQTCREEHKKHPGASVNFSEFSKKCSERWKTMSAKEKGKFE
DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPLAFFLFCSEYRPKIKEHPGLSI
GDVAKKLGEMWNNTAADDKQPYEKKAAKMKEKYEKNIAAYRAKGKPDAVKRGVVKAEQSK
KKKEEEDDEEDEEDEEEEEEEEHEDDEEEDDDE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaaaaagctgagaggcaaaatgtcctcatatgcattctttgtg
caaacttgccgggaggaacacaagaagcatccgggtgcttctgtcaacttctcagagttc
tccaagaaatgctcagaaaggtggaagaccatgtctgctaaagaaaaggggaaatttgaa
gacatggcaaaggcggacaaggctcgttatgaaagagaaatgaaaacctacatccccccc
aaaggggagaccaaaaaaaagttcaaggaccccaatgcacccaagaggcctcctttggcc
ttcttcttgttctgttctgagtatcgcccaaaaatcaaagaacacccaggcttgtccatt
ggtgatgttgcaaagaaactgggagagatgtggaacaacactgctgcagatgacaagcag
ccctatgaaaagaaggctgccaagatgaaggagaagtatgaaaagaatattgctgcttac
agagctaaagggaaacccgatgcagtgaaaaggggggtggtcaaggcagaacagagcaag
aaaaagaaggaagaggaagatgatgaggaggatgaagaggatgaggaagaggaggaagaa
gaggaacacgaagatgatgaagaagaagatgatgatgaataa
DBGET
integrated database retrieval system
