Phodopus roborovskii (desert hamster): 127218329
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Entry
127218329 CDS
T08852
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
prob04990
]
127218329 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:
prob04990
]
Other domain-containing proteins
Patched domain-containing proteins
127218329 (Ptchd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
127218329
NCBI-ProteinID:
XP_051035311
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSFQKANMLDQHHTDLILKLHT
AVTKIQVPRPGFNYTFAHICVLNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVKLF
QKSNSKVKIYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAEVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAILFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTAEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNSSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STDLPKKNFTDMLRYSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMYLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SMINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKE
FTRTKWVKNALEVHGVAILQSYLCYIVGLFPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggcttggccacttc
attgccagtcacccggtcttcttcgcttcggcgccggtgctcatctccatcctactcggc
gccagcttcagccgctaccaggtcgaagagagcgtggagcacctgctggcgccccaacac
agcctagccaagatagagcgcaacctagtcaacagcctctttccggtcaaccgctccaag
caccggctctactcggatctgcagacccctggacgctacggccgggtcatcgtcacctcc
ttccagaaagccaacatgctggaccagcatcacacggacctgatcttaaagttgcatact
gctgtaaccaagatccaggttccaaggcctggctttaactatacgtttgcccacatatgt
gtcctgaataatgataagacttgcattgtggatgacatagtacacgtcctggaagagcta
aagaatgctcgggccaccaatcggaccaattttgctatcacatatccgatcactcactta
aaggatggaagggctgtctataatgggcaccaacttggaggtgttactgtacacagcaag
gaccgggtgaaatctgcagaggccattcagctcacttactatctgcagtcaatcaacagt
ctcaatgacatggtagctgagaggtgggagtccagcttctgtgacacagttaaactattc
cagaaatctaacagcaaagtaaaaatatacccgtacacatcctcctcattgagagaagat
tttcagaagaccagccgcgtatcagaacgttacctggtcaccagcctgatcttggtagtc
accatggccatcctttgctgctctatgcaggactgtgtccgcagcaaaccctggttaggc
cttcttgggttagtgaccataagcctagccactctcactgcagctggaatcatcaatctt
actggtgggaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatatgggacttttgaaatgttatcctcgtggaggaaaactagagaggaccaacacgta
aaagagcgaactgcagaagtctatgcagactccatgctctccttctctctcaccactgcc
atgtacttggtcacctttggcataggggccagccctttcacgaacatcgaggcagccagg
attttctgctgcaattcctgtattgcaatcctcttcaactacctctatgtactctcattt
tatggttccagccttgtgttcactggctacatagaaaacaattaccagcatagtatattc
tgtagaaaagttccaaagcctgaggtattgcaggagaagccagcatggtataggtttctt
ctgacagctagattcagtgaggatacagctgaaggtgaggaagcaaacacttatgagagt
cacctattggtatgtttcctcaagcgctattactgtgactggataaccaacacctatgtc
aagccttttgtagtcctcttttatcttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcaacacaaaccattgag
tacactactgcccagcaaaagtactttagcaactacagtcctgttattgggttttacata
tatgagtccatagaatattggaactctagtgtccaagaagatgttctagagtatactaag
gggtttgtacggatatcctggttcgaaagctacttaaattatcttcggaaactcaatata
tccactgacttgcctaagaaaaatttcacagacatgttgaggtattccttccttaaagct
cctcagttttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaggtt
gatgtagtagcctctagaatgtatttggtggccaagaccatggaaacaaacagagaagaa
ctctatgatctcttggagactctgaggcggctttcagtcacctccaaggtgaagttcatt
gtctttaatccatcttttgtgtatatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgtttctgctcttcttctcggcattcctggtggcagat
tcgatgattaatgtctggatcactctaacagttgtgtcagtggagtttggagtgataggc
ttcatgactttatggaaagtagaactggactgcatctctgtgctatgcttaatctatgga
attaattacacaattgacaattgtgctccactgttatccacatttgtcctgggaaaggaa
tttacaagaactaaatgggtaaaaaatgccctggaagtgcatggggtagctattttacag
agctacctctgttatattgttggtctatttcctcttgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccttctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaggaaattgagtgtgtcgaaatggtggatattgacagtacccga
gttgttgaccagattaccacagtgtga
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