Phodopus roborovskii (desert hamster): 127218415
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Entry
127218415 CDS
T08852
Name
(RefSeq) nuclear RNA export factor 2-like
KO
K14284
nuclear RNA export factor
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03008
Ribosome biogenesis in eukaryotes
prob03013
Nucleocytoplasmic transport
prob03015
mRNA surveillance pathway
prob05014
Amyotrophic lateral sclerosis
prob05164
Influenza A
prob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127218415
03015 mRNA surveillance pathway
127218415
03008 Ribosome biogenesis in eukaryotes
127218415
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127218415
05168 Herpes simplex virus 1 infection
127218415
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127218415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127218415
03009 Ribosome biogenesis [BR:
prob03009
]
127218415
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127218415
mRNA cycle factors
Stress granule specific factors
127218415
Ribosome biogenesis [BR:
prob03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127218415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
NTF2
LRR_4
LRR_8
DUF1439
LRR_9
Motif
Other DBs
NCBI-GeneID:
127218415
NCBI-ProteinID:
XP_051035383
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MRIAILGVENNCALLAHGLETSAIFGNAHRWLDQQLCLPLACGPDWYSLVPLHDYNPAAC
HAQATPRPRPSLCDWIDDNEVITLSHLQALFEQSDEKIPLQEDKKDVSYSQGSSSKESLL
DEYHEDSLLLLQLQDNDRNIEINYASDDSQILYLPTFQIKEDDGTCYAGCQDIIFPEDEW
NDSVEDEALEGWFKITIPNGRKYNKMWIINLLQSHCSVHFTPVDFQYIRNRIQFFVQNAQ
SAFELKNMNCQISDEENRKISIHVNSSTEPLSVQYKLTPQQMEILKLSMKKRYDVSHKAL
YLRKFRFDPDLMDYGLDIFLNRRSCMSATLQIIQVDFPELLSLNLSNNKIYRLDALSELI
EKAPQIKILNLSKNALRTVCELEKMKGLKLKELWLEGNPLRSTFTDSSAYDGWKLFPTVD
TDTLEIIKPCKETYRGSESLKDLVVQFVLQYYLIYDYGDRRNLLTAYHADACFSLTTTSN
SNKPNMRTLEEYYKDSRNMKKVKDSFSRMQLLKHKKCNIVTCLHELPKTQHDLSSYVVDV
CAQTEKMICFSVNGVFKEMEGKSKGCIRAFTRTFILTTGRHFRLCIVNDEMILRNATAEE
TKKVFSTTMPTTFYAKSHLLMKDSSTQTDLK
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgctatccttggggtggaaaacaactgtgccttgctggctcatggactggaa
accagcgccatcttcgggaatgcacaccgctggctagatcaacagctgtgtttaccacta
gcttgtggaccagactggtacagccttgtgcccctgcacgattataaccctgctgcatgc
cacgcccaggccacgcccaggccacgcccatccctctgtgattggatagacgacaatgag
gtcataacattgagtcacctacaggccctctttgagcaaagtgatgagaaaatccctctc
caagaagacaagaaagatgtgagttattcccagggaagttctagtaaggagagccttctt
gatgaatatcatgaggacagtcttctgcttctacaactccaggacaatgatagaaatatt
gagataaattatgcttctgatgactcacaaatactatacttgcctaccttccaaatcaaa
gaagatgatggtacatgttatgctggatgccaagatataatttttccagaggatgaatgg
aatgatagtgtagaggatgaagccttggagggatggttcaagatcactattccaaatggg
agaaagtacaacaagatgtggataataaacttactccagagccattgcagtgtgcacttc
acaccagttgatttccagtacatcagaaaccggatacagttctttgttcaaaatgctcaa
agtgcctttgaattgaagaatatgaactgtcagataagtgatgaggaaaacagaaagatt
tctatccatgttaattcatctactgagcctttatctgtgcagtataaattaacaccacaa
cagatggagatcctaaaactgagcatgaagaaacgatatgatgtgtcccataaagctctg
tacctcaggaaatttcgctttgacccagacttaatggattatgggcttgacatatttctg
aacagaagaagctgcatgtctgccacccttcaaatcattcaagtggatttccctgagcta
ttatccttgaacttgagcaacaacaaaatatacaggcttgatgccctgtctgaattaata
gagaaggccccccagatcaagattctgaacctttcaaaaaatgcgctaagaaccgtgtgc
gagctggagaagatgaaggggctgaagctgaaagagctgtggctagaagggaaccctttg
cgcagcaccttcacagacagttctgcctacgatggctggaaattgttcccaacagttgat
actgacaccttggaaataataaaaccatgcaaggaaacgtacagaggatctgaaagtctc
aaggatctggtcgtgcaatttgtgcttcagtattacttgatctatgattatggtgatcga
cgcaatctcctcactgcttaccatgcagacgcctgcttctccctgaccactacttccaat
tccaacaagccaaacatgagaacgttagaagaatactacaaggatagtaggaatatgaag
aaagtcaaggactccttttcacggatgcagctgctgaagcacaaaaaatgtaacattgtg
acctgccttcatgaactgccaaaaactcagcatgatttaagttcctatgtagtagacgtt
tgtgcccagacagaaaaaatgatctgcttttctgtcaatggggtgttcaaagaaatggaa
ggaaagtctaagggatgtattcgtgcctttacccggacattcatcttaaccaccggcaga
catttcaggctttgcattgtgaatgatgagatgattctcaggaatgccacagctgaagag
accaaaaaggtcttttctaccaccatgcccacaaccttctatgccaagagtcatctgctg
atgaaggattcctccacccagactgatttgaagtga
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