KEGG   Phodopus roborovskii (desert hamster): 127218415
Entry
127218415         CDS       T08852                                 
Name
(RefSeq) nuclear RNA export factor 2-like
  KO
K14284  nuclear RNA export factor
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03008  Ribosome biogenesis in eukaryotes
prob03013  Nucleocytoplasmic transport
prob03015  mRNA surveillance pathway
prob05014  Amyotrophic lateral sclerosis
prob05164  Influenza A
prob05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127218415
   03015 mRNA surveillance pathway
    127218415
   03008 Ribosome biogenesis in eukaryotes
    127218415
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    127218415
   05168 Herpes simplex virus 1 infection
    127218415
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    127218415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prob03019]
    127218415
   03009 Ribosome biogenesis [BR:prob03009]
    127218415
Messenger RNA biogenesis [BR:prob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127218415
   mRNA cycle factors
    Stress granule specific factors
     127218415
Ribosome biogenesis [BR:prob03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    127218415
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind NTF2 LRR_4 LRR_8 DUF1439 LRR_9
Other DBs
NCBI-GeneID: 127218415
NCBI-ProteinID: XP_051035383
LinkDB
Position
Unknown
AA seq 631 aa
MRIAILGVENNCALLAHGLETSAIFGNAHRWLDQQLCLPLACGPDWYSLVPLHDYNPAAC
HAQATPRPRPSLCDWIDDNEVITLSHLQALFEQSDEKIPLQEDKKDVSYSQGSSSKESLL
DEYHEDSLLLLQLQDNDRNIEINYASDDSQILYLPTFQIKEDDGTCYAGCQDIIFPEDEW
NDSVEDEALEGWFKITIPNGRKYNKMWIINLLQSHCSVHFTPVDFQYIRNRIQFFVQNAQ
SAFELKNMNCQISDEENRKISIHVNSSTEPLSVQYKLTPQQMEILKLSMKKRYDVSHKAL
YLRKFRFDPDLMDYGLDIFLNRRSCMSATLQIIQVDFPELLSLNLSNNKIYRLDALSELI
EKAPQIKILNLSKNALRTVCELEKMKGLKLKELWLEGNPLRSTFTDSSAYDGWKLFPTVD
TDTLEIIKPCKETYRGSESLKDLVVQFVLQYYLIYDYGDRRNLLTAYHADACFSLTTTSN
SNKPNMRTLEEYYKDSRNMKKVKDSFSRMQLLKHKKCNIVTCLHELPKTQHDLSSYVVDV
CAQTEKMICFSVNGVFKEMEGKSKGCIRAFTRTFILTTGRHFRLCIVNDEMILRNATAEE
TKKVFSTTMPTTFYAKSHLLMKDSSTQTDLK
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgcgcattgctatccttggggtggaaaacaactgtgccttgctggctcatggactggaa
accagcgccatcttcgggaatgcacaccgctggctagatcaacagctgtgtttaccacta
gcttgtggaccagactggtacagccttgtgcccctgcacgattataaccctgctgcatgc
cacgcccaggccacgcccaggccacgcccatccctctgtgattggatagacgacaatgag
gtcataacattgagtcacctacaggccctctttgagcaaagtgatgagaaaatccctctc
caagaagacaagaaagatgtgagttattcccagggaagttctagtaaggagagccttctt
gatgaatatcatgaggacagtcttctgcttctacaactccaggacaatgatagaaatatt
gagataaattatgcttctgatgactcacaaatactatacttgcctaccttccaaatcaaa
gaagatgatggtacatgttatgctggatgccaagatataatttttccagaggatgaatgg
aatgatagtgtagaggatgaagccttggagggatggttcaagatcactattccaaatggg
agaaagtacaacaagatgtggataataaacttactccagagccattgcagtgtgcacttc
acaccagttgatttccagtacatcagaaaccggatacagttctttgttcaaaatgctcaa
agtgcctttgaattgaagaatatgaactgtcagataagtgatgaggaaaacagaaagatt
tctatccatgttaattcatctactgagcctttatctgtgcagtataaattaacaccacaa
cagatggagatcctaaaactgagcatgaagaaacgatatgatgtgtcccataaagctctg
tacctcaggaaatttcgctttgacccagacttaatggattatgggcttgacatatttctg
aacagaagaagctgcatgtctgccacccttcaaatcattcaagtggatttccctgagcta
ttatccttgaacttgagcaacaacaaaatatacaggcttgatgccctgtctgaattaata
gagaaggccccccagatcaagattctgaacctttcaaaaaatgcgctaagaaccgtgtgc
gagctggagaagatgaaggggctgaagctgaaagagctgtggctagaagggaaccctttg
cgcagcaccttcacagacagttctgcctacgatggctggaaattgttcccaacagttgat
actgacaccttggaaataataaaaccatgcaaggaaacgtacagaggatctgaaagtctc
aaggatctggtcgtgcaatttgtgcttcagtattacttgatctatgattatggtgatcga
cgcaatctcctcactgcttaccatgcagacgcctgcttctccctgaccactacttccaat
tccaacaagccaaacatgagaacgttagaagaatactacaaggatagtaggaatatgaag
aaagtcaaggactccttttcacggatgcagctgctgaagcacaaaaaatgtaacattgtg
acctgccttcatgaactgccaaaaactcagcatgatttaagttcctatgtagtagacgtt
tgtgcccagacagaaaaaatgatctgcttttctgtcaatggggtgttcaaagaaatggaa
ggaaagtctaagggatgtattcgtgcctttacccggacattcatcttaaccaccggcaga
catttcaggctttgcattgtgaatgatgagatgattctcaggaatgccacagctgaagag
accaaaaaggtcttttctaccaccatgcccacaaccttctatgccaagagtcatctgctg
atgaaggattcctccacccagactgatttgaagtga

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