Phodopus roborovskii (desert hamster): 127218436
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Entry
127218436 CDS
T08852
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127218436 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127218436 (Atrx)
03036 Chromosome and associated proteins [BR:
prob03036
]
127218436 (Atrx)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
127218436 (Atrx)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127218436 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
127218436
NCBI-ProteinID:
XP_051035408
LinkDB
All DBs
Position
Unknown
AA seq
2484 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETCSSPQVVMNQSTDKSSGSVINSDMMENN
KEEGTSSSEKFKSSGSSRSKRKPSIVTKYVESDDEKPMDENVNEKAANENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTILDENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKKKIKVE
SEKSTKVCDQTSKFSPKKNGSSCNGEEKKVDDSHSGSLTCTHSVLPVPKEMLKKTKKLIE
TTSNMNSSYIKFLKQAADNSEMSCALKLRQLKAFKSVLTDIKKAHLELEEDLNSEIQALD
AIHKEKNTKELKIIDAKSETKLRKGEKSYTAEKQEFLKSDARSSIKMTGNEHIPGEEHKA
NESTSAEHKGSGRKDGPPYEPTNPSEDLDMDIVSVPSSVPEDIFDSLENAMEVQCSSDYQ
GDGNSGTEPEVEISCLKLITSSKDSRGRIKSKMAAKVRKELYVKLTPVSLSNSPVKGADC
QEVPQEKDGRKSSRVTPNSEKCGLEEENSDNEHSVENDVALFLEESDLRRSPRVKTTPLR
RQTEINPAISNSDEESNETIKEKQKLSVPIRKKDKRNSSDCAVVHCKPHKVPKAKQAEIV
DQTSDSDEMLAVLKEASQMSHSSSSDTDFNETQMNHKIEIGKDDNGKRKRKNSTSGSDFD
IKKGKSIETTIISKKKRQNYSDSSNYDSELEREIKAMSRIGATRVTKKNVSDKKERDFSE
DGKQSRKVVDYEGQGSVKTVQEGLSGDDTGDPERQGESLSASEGSVEKGKGAVDSRVVDS
RVVRGTRQQPSTSSDGPEKPSGGEEDGNSDGKRVSKTKEKTKRLRSRACRKVQRRSSHVP
DRFPKKEQSDESSECEKKQDRLATGAKGKRSADLKEETIKAERQYESSSDGTEKLPEGEE
SGHFSKGVKQNKNDTTDEEKKGKKGKEKLSKKKEDVSDGVDKLPDKGDSCDSSEDKKNKK
RVSRREKKKSSLPAKSSVKRPECSSSDAEKYSLKGECCDSTSKRLKRNELRERRNLNSKR
NTKEIQSCSSSSDAEGCLEDSKKRKKQRTSAKKKTGNAKEKRRNSLRTSTKRKQADVTSS
SSDIGDDDQNSAGEESSDEQKIKPVTENLVLPSHTGFCQSSGDEALSKSVPVTVDDDDDD
NDPENRIAKKMLLEEIKANLSSDEAGSTDDEPEGEKKRIGKQSEEIPGDEEAPTQVNSES
DSDSEESKKPRYRHRLLRYKLTVSDGESGEEKMTKPKEHKDAKGRNRRKVSSEDSEETDF
QESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEE
EMKEDDEEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAE
RERERDKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQ
FMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLN
TALNWMNEFEKWQEGLNDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNL
AQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGT
PLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYE
MLAGCVQRKDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNNTEGGRGKAG
AKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDEYAK
KKKTKGKKGKKDISSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNNPSGSLKLEESKT
TSTSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLD
LIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNV
RGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQ
GTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDT
PMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMR
FNIPTGTNLPPVTFSSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQ
PLEDIISTVWKENMNLSETQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRI
LMNRRLQQQYNQQQQQQMTYQQATLSHLMMPKPPNLIMTPSNYQQIDMRGMYQSVAGGMQ
PPPLQRAPPPMRSKNPGPSPGKSM
NT seq
7455 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctagcacattcatcagaagaatctgaggaaacgtgttcttctccacaagttgtaatg
aaccaaagcacagataaaagcagtggttctgtaattaactctgatatgatggaaaataac
aaggaagagggaactagctcctcagaaaaattcaagtcttcaggatcttcaaggtcaaag
aggaaaccttcaattgtgacaaaatatgtagaatctgatgatgaaaaacccatggatgag
aatgtaaatgaaaaagctgctaatgagaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatggacttcatgggattgtgagctgtacagcttgtggacaacaggtcaatcatttt
caaaaagattccatttatagacacccttcactgaaagtccttatttgtaagaactgcttt
aagtattatatgagtgatgatattagtcgtgactcagatggaatggatgaacaatgtaga
tggtgtgcagaaggtgggaacttgatttgttgcgacttttgccataatgccttctgtaag
aaatgcatcctgcgcaatcttggtcgaaaggagttatctacaatactggatgaaaacaac
caatggtattgctacatttgtcagccagagcctctgttggacttggtcactgcatgtaat
agcgtatttgagaatttagaacagttgttgcaacaaaataagaagaagataaaagttgag
agtgaaaagagtactaaagtatgtgaccaaacatccaaattttctccaaagaagaatggt
tccagttgtaatggagaagagaagaaagtagatgattcacattcgggctctttaacctgc
actcactcagtattacctgtgcccaaagagatgcttaagaagacaaaaaaactgattgag
actacatccaacatgaactccagttacattaagtttctcaagcaggcagcagataattca
gaaatgagttgtgctctgaagttacgtcagcttaaggcttttaaatctgtgttgactgat
atcaagaaggctcatcttgagttagaagaagatttgaattcagagattcaagctttggat
gctatccacaaagagaaaaataccaaagagcttaaaatcatcgatgcaaagtctgaaaca
aaattacgaaagggggaaaaatcttatactgcagaaaagcaagagtttttaaagtcagat
gctagatcatcaataaagatgacaggcaatgagcacatcccaggagaagagcacaaagca
aatgaaagcactagtgctgaacacaagggctcgggtaggaaagatggacctccgtatgaa
cctactaacccttctgaagatttagacatggatattgtgtctgttccgtcctcagttcct
gaagacatttttgatagcctagagaatgctatggaagttcagtgttcatctgattatcaa
ggagatggcaatagtgggaccgagccagaagtggagatatcgtgtctaaaacttatcaca
tcttcgaaagacagcagaggacgtattaagtcaaaaatggcagcgaaagtgagaaaagaa
ttatatgttaaactcacccctgtttccctttccaattccccagttaaaggtgctgactgt
caggaagttccacaagagaaggatggccgtaaaagttccagggtgacccccaactcagag
aaatgtggactggaagaggaaaatagtgataatgaacattcagttgaaaatgatgttgca
ttatttttagaagaatctgatcttcgaagatccccacgtgtaaaaactacacccttgcgg
agacaaacagaaattaaccctgcaatatccaattcagacgaagaaagtaatgaaactatt
aaagagaaacaaaagctgtcagttccaataagaaaaaaagataagcggaattcttcagat
tgtgctgttgttcactgtaaacctcataaggtgcccaaagctaagcaagcagagattgta
gatcaaacttcagattctgatgaaatgctagcagtccttaaagaggcaagccagatgagt
cacagctcttcttcagacactgactttaatgaaacacagatgaatcataaaattgaaata
gggaaagacgataatggaaaaaggaaacggaaaaattctacttctgggtcagatttcgac
attaaaaaaggaaagtcaattgaaaccaccattatctctaaaaagaaacgccaaaactac
tcagattcgtctaactatgactcagagttggagagagagataaaagccatgagcagaatc
ggggctaccagagtaactaaaaaaaatgtttcagataaaaaagaacgtgacttttctgaa
gatggaaagcagagcagaaaagtagtggactacgaagggcagggaagtgtgaagactgta
caagaaggattgtctggcgatgacactggtgaccctgaaagacagggagaaagtttgtct
gcatcggaaggttccgttgagaaaggcaagggtgcggtggattcaagagtggtggattca
agagtggtgcgtggcaccaggcagcagccaagtacttcctccgatggcccagaaaagcct
tcagggggagaggaagatggaaattctgatggcaaaagagtttctaaaactaaagaaaag
actaaacgtctgagaagcagagcatgtaggaaagtacagcggaggtcatctcatgttcct
gatagatttccaaagaaagagcagagtgatgaatcttcagaatgtgagaagaagcaagac
agactggcaactggagcaaaaggaaagagaagtgcagacttaaaggaagaaacaattaag
gcagagcgacagtatgagtcttcttctgatggtactgagaaattgcctgagggagaagaa
agtggtcatttttctaaaggcgtaaaacaaaataagaatgatacaactgatgaagaaaag
aaaggcaaaaaagggaaagagaaattatctaaaaagaaggaagacgtatctgatggtgtt
gataagttgccagacaaaggagacagttgtgactcttcagaagataaaaagaacaagaag
agagtgtctcggagagagaagaagaaatccagcttgcctgcaaagagttcagtgaagagg
ccagagtgttcatcatcggatgctgagaaatattccttgaaaggagagtgttgtgactcc
actagtaagagactgaaaagaaacgaattgagagaaagaagaaatttaaattcaaagaga
aacaccaaggaaatccagagttgttcatcttcttctgatgctgagggatgtttggaagat
agtaagaaacggaagaaacaaagaacttcagccaaaaagaagacaggcaatgccaaggaa
aaaagaagaaactccttaagaacaagtactaaaaggaagcaagcggacgttacttcttca
tcttctgacataggagatgatgatcagaattctgcaggtgaggagagcagcgatgagcag
aaaataaagcctgtgactgagaatttagtgctgccttcacacactggattttgtcaatct
tcaggagatgaagccttatctaaatcagtgccagtcacagtggatgatgacgacgacgac
aatgatcctgagaatagaattgccaagaagatgcttttagaagaaattaaagccaatctt
tcctctgatgaggctggatctacagatgatgaacctgaaggagagaaaaagagaattgga
aaacaaagtgaagaaatcccaggagatgaggaagccccaactcaagtcaattccgaatca
gattcagattctgaagaatctaagaagccaagatacaggcacagacttttgaggtacaaa
ctgactgtgagtgatggagaatctggagaagaaaaaatgacaaagcctaaagaacataaa
gatgccaaaggaagaaatagaagaaaggtgagcagtgaggattcagaagaaacggacttt
caagagtcaggagttagtgaagaagtgagtgaatctgaggatgaacaacggcctagaaca
aggtctgcaaagaaagcagaattggaagaaaatcagcggagttataaacagaaaaagaaa
agacgacggattaaggttcaagaggattcatccagtgaaaataagagccattctgaagaa
gaaatgaaggaagatgatgaggaggaggaggaagaggaggaagaggatgaaaatgatgat
tctaagtcacctggaaaaggcagaaagaaaattcgcaagattcttaaagatgataaacta
agaacagaaactcagaatgcccttaaagaagaggaagagagacgaaagcgtattgcagag
agggaacgtgagagagacaaattaagagaggtgatagaaattgaggatgcttcacctacc
aagtgtccaataacaaccaaattggttttagatgaagatgaagaaaccaaagaaccttta
gtgcaggttcatagaaacatggttataaaattgaaaccccaccaagtagatggtgttcag
tttatgtgggattgctgctgtgagtctgtgaaaaagacaaagaaatctccaggttcaggg
tgtattcttgcccactgcatgggccttggtaagaccttgcaggtggtcagttttcttcac
acagttcttttgtgtgacaaactggatttcagtacagccttagtggtttgtcctcttaac
acagctttgaattggatgaatgaatttgagaagtggcaagagggactaaatgatgatgaa
aagcttgaggtctctgaattagcaactgtaaaacgtcctcaggagagaagttatatgcta
cagagatggcaagaagatggtggcgttatgatcatagggtatgagatgtatagaaatctt
gctcaaggaaggaatgtgaagagtcggaaacttaaagaaatatttaataaagctttagtt
gatccaggccctgattttgttgtttgtgatgaaggccatattctaaaaaatgaagcatct
gcggtttcaaaagctatgaactctatacgatctaggaggaggattattttaacaggaaca
ccacttcaaaataacctgattgagtatcattgcatggttaattttatcaaggaaaatttg
cttggatccatcaaggagttcaggaatagattcataaatccaatccaaaatggtcagtgt
gcagattctaccatggtagatgtgagagtgatgaaaaagcgtgctcatattctctatgaa
atgctagctggatgtgttcagaggaaagattatacagcattaacaaagttcttgcctcca
aagcatgaatatgtactagctgtgagaatgacggctattcagtgcaagctctatcagtac
tacttagatcacttaacaggcgtaggcaataacactgaaggtggaagaggaaaggcaggc
gcaaagctctttcaagattttcagatgttgagtagaatctggactcatccttggtgttta
cagctggactacattagcaaagaaaataagggttattttgatgaagatagtatggatgaa
tttatagcttcagattctgatgaaacttccatgagcttaagctcagatgagtatgcaaaa
aagaagaaaacaaagggtaaaaaagggaaaaaggatattagctcaagtggaagcggtagt
gacaatgatgtagaagtcatcaaagtctggaattcaagatctagaggaggtggagaaggg
aatgtggatgaaacaggaaacaacccttcagggtctttgaagctagaagaaagtaaaact
acttctacttctaacccaagtagcccagctccagattggtacaaagattttgttacagat
gctgatgcagaggttttagaacattctggaaaaatggtactactttttgaaattcttcga
atggctgaagaaattggggataaagttcttgtttttagccagtcgctcatatccctggac
ttgattgaagactttcttgaattggctagtagggagaaaacagaagataaagataaacct
cttatttataaaggtgaagggaagtggctccgaaatattgactattaccgcttggatggt
tctactactgcacaatcaaggaagaagtgggctgaagaatttaatgatgaaaccaatgtg
agagggcgattatttatcatttccaccaaagcaggatctcttggaattaacctggtagct
gctaatagagtgattatatttgatgcttcttggaatccatcttatgacatccagagtata
ttcagagtttatcgctttggacaaactaagcctgtttacgtatataggttcttagctcag
ggaaccatggaagataagatttatgatcgacaggtaacaaagcagtcactatctttccga
gttgttgatcaacagcaggttgaacgtcattttaccatgaatgagcttactgaactttat
acttttgagccagacttactagatgaccctaactcagaaaagaagaagaaaagggatacc
cccatgctgccaaaggataccatacttgcagaacttcttcagatacataaagaacacatt
gtaggatatcatgaacatgattctcttttggaccacaaagaagaagaagagctgactgaa
gaggaaagaaaggcagcttgggctgaatatgaagcagaaaagaagggactgaccatgcgt
ttcaacataccgactgggaccaatttaccccctgtcactttcagctctcaaactccttat
attccttttaatttgggagccctgtcagcaatgagtaatcaacagctggaggaccttatt
aatcaaggaagagagaaagttgtagaagcaacgaacagtgtgacagcagtgaggatccag
cctcttgaagatatcatttcaactgtatggaaagaaaacatgaatctctctgagacccaa
gtacaagcactagcattaagtagacaagccagccaggagcttgacgtgaaacgaagagaa
gcaatctacaatgatgtattgacaaaacaacagatgttaatcagctgtgttcagcgaata
cttatgaatagaaggctccagcagcagtacaatcagcagcagcaacaacaaatgacttat
cagcaagcaacactgagtcacctcatgatgccaaagcctccaaatttaatcatgactcct
tctaactaccagcagattgatatgagaggaatgtatcagtcagtggctggtggtatgcag
ccaccacccttacagcgtgcaccacccccaatgagaagcaaaaatccaggaccttcccca
gggaaatcaatgtga
DBGET
integrated database retrieval system
