Phodopus roborovskii (desert hamster): 127218457
Help
Entry
127218457 CDS
T08852
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prob01002
]
127218457
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127218457
Enzymes [BR:
prob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127218457
Peptidases and inhibitors [BR:
prob01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127218457
Ubiquitin system [BR:
prob04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127218457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
EcoEI_R_C
Motif
Other DBs
NCBI-GeneID:
127218457
NCBI-ProteinID:
XP_051035437
LinkDB
All DBs
Position
Unknown
AA seq
2574 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQGDAPPQI
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLAQDWFPLLELLAMALNP
HCKFHIYNGTRPCESVSASVQVPEDELFARSPDPRSPKGWLVDLLNKFGTLNGFQILHDR
FINGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLEDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSSSRFSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLATYMESMRLYARDHEDYDPQTVRVGSRYSHVQEVQ
ERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDI
NKDFFESNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLW
RVVIQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDG
DKDSINCARQEAVRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSFIVRFPNQ
GRQVDDLEVWSHTNDTIGSVRRCILNRIKANVAHTKIELFVGGELIDPGDDRKLIGQLNL
KDKSLITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHP
RYISFLWQVADLGSSLNMPPLRDGARVLMKLMPPDSTTIEKLRAICLDHAKLGESSLSPS
LDSLFFGPSASQVLYLTEVVYALLMPAGAPLADDSSDFQFHFLKSGGLPLVLSMLTRNNF
LPNADMETRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPGVEGVNPMTSVNQVTHDQA
VVLQSALQSIPNPSSECMLRNVSVRLAQQISDEASRYMPDICVIRAIQKIIWTSGCGGLQ
LVFSPNEEITKIYEKTNAGNEPDLEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTF
IIDLLLHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFITLLFTVLGSTARERAKHSGDY
FTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDDVKRTGETGIEETILEGHLGVTK
ELLAFQTPEKKFHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCGSP
ATINAGFELLVALAVGCVRNLKQIVDSLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKG
FVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRD
DVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWG
EPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEE
SFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAI
QLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDNVNPESQLIQQNEQSEE
KAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEM
KNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDHDDELMRYISEIAITT
RPHQIVMPSAIERSVRKQNVQFMHNRMQYSLEYFQFMKKLLTCNGVYLNPPPGQDHLSPE
AEEITMISIQLAARFLFTTGFHTKKIVRGSASDWYDALCILLRHSKNVRFWFAHNVLFNV
SNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPFASPGPSSQAYDNLSLSDHL
LRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLSVPATFMLVSLDEGPGP
PIKYQYAELGKLYSVVSQLIRCCNVSSRMQSSINGNPSLPNPFGDPNLSQPIMPIQQNVV
DILFVRTSYVKKIIEDCSNSDETVKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPY
LDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFS
SCPVAYQILQGNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPVQSNETSNGYF
LERSHSARMTLAKACELCPEEVKKATSLQEIEMEESKEPDDQDAPDEHESPPPEDAPLYP
HSPGSQYQQNNHVHGQPYTGPAAHHMNNPQRTGQRAQENYEGSEEVSPPQTKDQ
NT seq
7725 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccagttggagggaatgacaaccaaggccaagctcct
gatggacagtctcagccccccctccaacagaatcagacttcatcgcctgattcttccaat
gagaattccccggcaactcctcctgatgaacaaggtcaaggtgatgcccctccacagatt
gaagatgaggaacctgcatttccacatactgacttggcaaagttagatgatatgattaac
aggcctcgatgggtcgttccagttttgccgaaaggggaattagaagtgcttttagaagct
gctattgatcttagtaagaaaggccttgatgttaaaagtgaagcatgccagcgatttttc
cgagatgggctaacaatctcattcacaaaaatccttacagatgaagcagtgagtggctgg
aagtttgagattcatagatgtattattaacaatactcatcgcctggtggagctgtgtgtg
gctaagttggcccaagactggtttccacttctagaacttcttgccatggccttaaatcct
cattgcaagttccatatctacaatggtacacgtccatgtgaatcagtgtctgcaagcgtt
caggtgcctgaagatgaactcttcgctcgatctccagaccctcgatcaccaaaaggctgg
ctagtggatctgctcaacaaatttggcactttaaatggattccagatattgcatgatcgt
tttattaatggatcagcattaaacgttcagataattgcagcccttattaaaccttttgga
cagtgctatgagtttctcactcttcacacagtgaaaaagtactttcttccaataatagaa
atggttccacagtttttagaaaatttaactgatgaagaactaaaaaaagaagcaaagaat
gaagccaaaaatgatgctctttcaatgattattaaatctttgaagaatttagcttcccgg
gttcctggacaagaagaaactgtaaagaatttagaaatatttaggttaaaaatgatactt
agattattacaaatttcttctttcaatggaaaaatgaatgcactgaatgaagttaataaa
gtaatttctagtgtgtcatactatacccatcggcatggcaatcctgaggaagaagagtgg
cttacggcagagagaatggctgaatggatacaacagaataatattttgtctatagtttta
cgagatagtcttcatcaaccacagtatgtagagaaactagaaaagattcttcgttttgtc
atcaaagaaaaagctctgaccttggaagatctcgataatatctgggcagcacaggcaggg
aaacatgaagctattgtgaagaatgtacatgatctactggccaaattggcttgggatttt
tctcctgaacaactagatcacctttttgattgctttaaggccagttggacaaatgcaagt
aaaaaacaacgtgaaaagctccttgagctgattcgtcgtcttgcagaagacgataaagat
ggtgtgatggcgcataaagtgttgaaccttctgtggaatctagcccatagtgatgatgtg
cctgtagacatcatggacctagctctcagtgctcatatcaaaatactagattatagttgc
tcccaggaccgggacacacaaaagatccagtggatagatcgatttatagaagaacttcgc
acaaatgacaaatgggtcattcctgcactgaaacaaattcgagaaatttgtagtttgttt
ggcgaagcacctcaaaatttgagttcttctcgtttcagtcaaactcagcgaagtccccat
gtattttatcgtcatgacttaattaatcaacttcagcacaatcatgccctagttactttg
gtagcagaaaaccttgcaacttacatggaaagcatgagactgtatgccagagatcatgaa
gactatgacccacaaactgtgagagtgggaagtagatatagtcatgttcaagaagtccaa
gaacggcttaactttcttagatttttattgaaggatggccaactgtggctgtgtgctcct
caggcaaaacaaatatggaagtgcttagctgaaaatgccgtttacctctgtgatcgcgaa
gcctgttttaagtggtattccaaattaatgggggatgaaccagacttagatcctgatatc
aataaggacttttttgaaagtaacgtgcttcagcttgatccttccttgttaactgagaat
gggatgaaatgttttgagagattcttcaaagctgtgaattgtcgagaaggaaaactagta
gcaaaaagaagagcctatatgatggatgatttggagttgataggattagactatctttgg
agggttgtaattcagagtaatgatgatattgccagccgagctatagatcttcttaaagag
atatacacaaaccttggtccaaggctgcaggtcaatcaggtggtgatccacgaagacttc
attcagtcttgctttgatcgtttgaaagcctcttatgacactttgtgtgttttggatggt
gacaaagacagtattaattgtgcaagacaggaagctgttcgaatggttcgagtattaact
gttctaagagaatatataaatgaatgtgacagcgattatcatgaagaaagaacaattttg
cctatgtcaagagctttccgtggtaaacacctctcttttatagttcgatttccaaaccag
ggcagacaagtagatgacttggaggtctggtctcatacaaatgatacaattggttcagtt
cgacgatgtattctcaatcgcattaaagctaatgtagctcatacaaaaattgaactcttt
gtgggtggtgagctaattgatcctggagatgacagaaagttgattggacaattaaaccta
aaagataaatcactaattacggccaaacttacacaaataagttccaatatgccttcaagt
cctgatagctcttctgattcctcaactggatctcctggaaaccatggtaatcattacagt
gatggccctaatccagaagtagaaagctgtttgcctggagtgattatgtcacttcatccc
agatacatctctttcctttggcaagttgcagacttagggagcagcctaaatatgccacct
cttagagatggagcaagagtgcttatgaaacttatgccgccagatagtacaacgatagaa
aaattaagagctatttgtttggaccatgccaaacttggagaaagcagccttagtccgtct
cttgactcacttttctttggtccttctgcctcacaagtgctatacctaacagaggtagtc
tatgcattgttaatgcctgctggtgcacctctggctgatgattcctctgattttcagttt
catttcttgaaaagtggtggtctaccccttgtcctgagtatgctaaccagaaataacttc
ctgccaaatgcagatatggaaactcgaaggggtgcctacctcaatgctcttaaaatagcc
aaacttttactaactgccattggctatggccacgttcgggctgtggcagaagcttgtcag
ccaggtgtagaaggcgtgaatcccatgacatcggtcaaccaagtaactcatgatcaagca
gtggtgctacaaagtgcccttcagagcattcctaacccatcatctgaatgcatgcttaga
aatgtgtccgttcgtcttgctcagcaaatttccgatgaggcttcaagatatatgcctgat
atttgtgtaattagagctatacaaaaaattatttggacatcaggatgtggagggttacag
ctggtattcagcccaaatgaagaaatcacaaaaatttatgagaagaccaatgcaggcaat
gagccagacctggaagatgagcaggtttgctgtgaagcattggaagttatgacattgtgt
ttcgccttgattccaacagccttagatgctctaagtaaagaaaaagcttggcagacattc
attattgacttactgttgcactgtcacagcaaaactgttcgtcaagtagcacaagagcaa
ttcttcctaatgtgcaccagatgttgcatgggacacaggcctctacttttcttcattact
ctgctctttactgttttggggagcacagccagagagagggctaaacattcaggcgactac
tttactcttttaaggcaccttcttaattatgcttacaacagtaatattaatgtacccaat
gctgaagttcttctcaataatgaaattgattggcttaaaagaattagggatgatgttaaa
agaacaggtgaaacaggtattgaagagacaatcttggaaggacaccttggggttacaaaa
gagctactggcttttcaaactcctgagaaaaagtttcatattggttgtgaaaagggaggt
gctaatctcattaaagaattaatcgatgatttcatctttcctgcatccaatgtttacctg
caatatatgagaaatggagagctcccagctgaacaggctattcctgtctgtggttcacca
gcaacgattaatgctggttttgagttacttgtagcattagctgttggctgtgtgaggaac
ctcaaacagatagtagattctttgactgaaatgtattacattggtacagcaataactact
tgtgaagcacttactgagtgggaatacctgccacctgttggaccccgcccaccaaaagga
tttgtggggctgaaaaatgccggtgctacttgttacatgaattctgtaattcagcagctc
tatatgattccctccatcaggaatggtattcttgcaattgaaggcacaggtagtgatgta
gatgatgatatgtctggggatgagaagcaggacaatgagagcaatgttgatcccagggat
gatgtgtttggatatcctcaacagtttgaagataaaccagcactgagtaaaacagaagat
agaaaagagtacaatatcggtgttctaagacaccttcaggttatctttggacatttagct
gcttctcgactacagtactatgtgcccagaggattttggaaacagttcaggctttggggt
gagcctgttaatcttcgtgaacaacatgatgctttagaattctttaattcactggtggat
agtttagatgaagctttaaaagccttagggcatccagctatgctaagtaaagtcttggga
ggttcctttgctgatcagaagatttgccaaggctgcccacataggtacgaatgtgaagaa
tcttttacgactctgaatgtagacattagaaaccatcaaaatcttcttgattctttggaa
cagtatgtcaaaggagatttattagaaggggcaaatgcttatcattgtgaaaaatgcaat
aaaaaggttgataccgtaaagcgtttgctcattaaaaaattacctcctgttcttgctatc
caactaaaacgattcgattatgactgggaaagagaatgtgcaatcaagttcaacgattac
tttgaatttcctcgagagttagacatggaaccttacacagtcgcaggtgttgctaagctg
gagggagacaacgtaaacccagaaagtcagctaatacaacagaatgagcagtctgaagag
aaagcaggaagcacaaaatacagacttgtgggtgtgcttgtgcacagtggtcaagcaagt
gggggacattactattcttacatcattcagaggaatggaggagatggcgaaaagaatcgc
tggtataaatttgacgatggagatgtaacagagtgtaaaatggatgacgacgaagaaatg
aaaaaccagtgttttggtggcgagtacatgggagaagtatttgatcacatgatgaaacgc
atgtcatacaggcgccagaaaaggtggtggaatgcttatatacttttctatgaacgaatg
gacacaatagaccacgatgatgagttgatgagatacatatcagagattgctatcaccaca
aggcctcatcagattgttatgccatcagccattgagagaagtgtacggaagcaaaatgta
cagttcatgcacaacagaatgcagtacagtttggaatactttcagtttatgaaaaaacta
ctcacgtgtaatggtgtttatttaaaccctcctccagggcaagatcacctgtctcctgaa
gcagaagaaatcactatgattagtattcagcttgctgccaggttcctctttactacagga
tttcacacaaagaaaatagttcgtggctctgccagtgattggtatgacgcattgtgtatt
ctccttcgtcacagcaagaatgtccggttttggtttgctcacaatgtcctttttaatgtt
tcgaatcgattctctgaataccttttggaatgccctagtgcagaagtgagaggtgcattt
gctaaacttatagttttcattgcacatttttccttgcaagatggtccgtgtccttcacct
tttgcatctcctggaccttctagtcaggcttatgacaacttaagcttgagtgatcactta
ctaagagcagtactaaatctcttgaggagggaagtttcagagcatggacgtcatttacag
cagtatttcaacttgtttgtaatgtatgccaatttaggagtggcagagaagacacagctg
ctgaaactgagtgtacctgctacctttatgcttgtgtccttagatgaaggtcctggtcct
ccaattaaatatcagtatgctgaattaggcaaattatactcagtagtgtcacagctaatc
cgctgttgcaatgtctcttcacgaatgcagtcttcaatcaatggtaatccttctcttcca
aatccttttggtgatcctaatttatcacaacctataatgccaattcaacaaaatgtggta
gacattttatttgtgagaacaagttatgtgaagaaaattatcgaagactgcagtaactct
gatgagaccgtcaaattgcttcgtttttgctgctgggagaatcctcagttttcatctacc
gtcctcagtgaacttctttggcaggttgcgtattcctatacttatgaactccgcccctat
ttggatctgcttttacaaatcttactgattgaagactcctggcagactcacagaattcat
aatgcccttaaaggaattccagatgaccgagatgggctgtttgacacaatccagcgttct
aagaatcactatcaaaaaagagcataccaatgtataaaatgtatggtagctctctttagc
agttgtcctgttgcttaccagatcctgcagggcaatggagatcttaaaaggaaatggacc
tgggcagtagaatggcttggagatgaactcgaaagaagaccatacactggcaatcctcaa
tacacttacaacaattggtctcccccagtgcaaagcaatgaaacatcaaatggctatttc
ttggagagatcacatagcgctaggatgacacttgcaaaagcttgtgaactctgtcctgag
gaggtaaaaaaagccaccagtctccaagaaatagaaatggaagaaagcaaagaaccagat
gaccaggatgccccagatgagcatgagtcccctccaccagaagatgctccattatacccc
cattcccctggatctcaatatcagcagaataaccatgtgcatggacagccatatacaggc
ccagcagcacatcatatgaataaccctcagagaactggccaacgagcacaagaaaattat
gaaggcagtgaagaagtgtccccacctcagactaaggatcagtga
DBGET
integrated database retrieval system
