Phodopus roborovskii (desert hamster): 127218881
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Entry
127218881 CDS
T08852
Symbol
Slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04082
Neuroactive ligand signaling
prob04721
Synaptic vesicle cycle
prob04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127218881 (Slc6a4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
127218881 (Slc6a4)
04721 Synaptic vesicle cycle
127218881 (Slc6a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prob02000
]
127218881 (Slc6a4)
Transporters [BR:
prob02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127218881 (Slc6a4)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
127218881
NCBI-ProteinID:
XP_051035914
UniProt:
A0AAU9YZS1
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All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSQQVLSACKAREDCQENGVLQKGVPTPGDRAEPGQISNGYSAVPSTSAGDEAT
HSMPAATTTLVAEIRQGERETWGKKMDFLLSVIGYAVDLGNIWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELVLGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTII
AWALYYLISSFTDQLPWTSCKNSWNTDNCTNYFSQDNVTWTLHSTSPAEEFYLRHVLQIH
QSKGLQDLGTISWQLALCIILIFTIIYFSIWKGVKTSGKVVWVTATFPYIVLSVLLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLIVVITCILGSLLT
LTSGGAYVVTLLEEYATGPAVLTVALIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPHWSIILGYCIGMSSVICIPMYIIYRLIST
PGTLKERIIKSITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccttgaattctcagcaagtgctgtcagcatgcaaggccagagaggac
tgtcaagaaaatggtgttctacagaagggtgtccccaccccaggggacagggcagagcct
ggccaaatatccaatgggtattctgcagttcccagcacgagtgcaggagacgaagctaca
cactctatgccagctgccaccaccaccctggtggctgagattcgccaaggggagcgggag
acctggggcaagaagatggattttctcctgtctgtcattggctatgcggtagacctgggc
aacatctggcgttttccctacatatgctaccagaatggcggaggtgccttcctcctcccc
tacaccatcatggccatctttgggggaatcccgcttttttacatggagcttgtactgggc
cagtaccaccgaaatgggtgcatttctatatggaggaaaatctgcccgatcttcaaaggg
attggctatgccatctgcatcattgccttctatatcgcctcctactacaacaccattata
gcctgggccctctactacctcatctcctccttcaccgaccagctgccctggacaagctgc
aagaactcttggaacacggacaattgcaccaactacttctcccaggacaacgtcacctgg
acactccattccacgtcacctgctgaggagttttacttgcgccatgtcctgcagatccac
cagtctaaaggactccaggacctggggaccatcagctggcagcttgctctctgcatcatt
ctcatcttcaccattatctactttagcatctggaaaggagttaaaacatctggcaaggtg
gtgtgggtgacagccacctttccttacatcgtcctgtctgtcctgctggtgaggggggcc
acccttcctggagcctggagaggggttgtcttctacttaaaacccaactggcagaaactc
ttggagacaggggtgtgggtggatgctgctgctcagatcttcttctctcttggcccgggc
tttggggttctcctggcttttgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagtgtggtgaattgcatgacaagctttgtttctggctttgtcatcttc
acggtgcttggctacatggcagagatgaggaatgaggacgtatccgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaggctatagccaacatgccagcatct
acattctttgccatcatcttcttcctcatgttaatcacattgggtttggatagcacgttt
gcaggcctggaaggcgtgataacagcggtgctggatgagtttccacacatctgggccaag
cgtcgggagtggtttgtgctcatcgtggtcattacttgcatcttgggatccctgctcaca
ctgacttccggaggggcatatgtggtgacactgctggaggagtatgccacagggcccgca
gtgctcacagtggcactcatagaagcagttgccgtgtcttggttctacggtatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagcccgggttggttctggaggatctgc
tgggtagccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagccca
ccccaactgcggcttttccaatataattatcctcactggagtatcatcttgggctactgc
atagggatgtcatctgtcatctgcatccccatgtacatcatttatcggctgatcagcact
ccggggacacttaaggagcgcattattaaaagtatcactcctgaaacaccaacagaaatt
ccctgtggggacatccgcttgaacgctgtgtaa
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