Phodopus roborovskii (desert hamster): 127218897
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Entry
127218897 CDS
T08852
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127218897 (Vps53)
Membrane trafficking [BR:
prob04131
]
Protein recycling
Others
EARP complex
127218897 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
127218897 (Vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
NBD94
TPR_CAND1
hAT-like_RNase-H
COG3_N
COG5_N
Med11
Motif
Other DBs
NCBI-GeneID:
127218897
NCBI-ProteinID:
XP_051035935
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWYMTERISVEFCHVTRTELSKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPPSTNPFLEEETAPEMEELALEKGELEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPNTDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMVALTTIFQKYLREYAWKTLSGNLPKTSSSSGGLTISSLLKEKEGSE
VARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPAPPSGTESSSTLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagttcgtggaggagctggaggccgtgctacagctcacg
cctgaggtgcaactagccatagagcaggtatttccaagccaggaccctctagatcaagct
gacttcaatgctgttgagtatatcaatactctgttcccaacagagcaatctctggcaaac
atagatgatgtcgtgaacaaaattagactgaaaataaggagactggatgacaacatccgg
actgtcgtaagaggtcaaacaaacgtggggcaggatggaaggcaagcactcgaagaggcc
cagaaagccatacaacagctctttggcaagatcaaggatatcaaagacaaagcagaaaag
tcagaacaaatggtgaaggagatcacacgagatattaagcagttagaccatgccaagcgc
cacctgaccacctcaatcacgacactgaaccacttgcacatgctggctggtggggtcgac
tccctggaagccatgaccaggcgcagacagtacggagaagttgctaacctccttcagggt
gtaatgaatgttctggagcactttcacaagtacatgggaatcccacagatccggcagctt
tctgaaagggtgaaggctgcacagactgagttaggacagcagatcctggctgattttgaa
gaggcgtttccttcgcagggtaccaagaggccaggaggacccagcaatgtcctgagagat
gcctgcctggtggctaatattttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacaacatctttcagagtacctagtactttttcaagaaaaccaagatgttgcctgg
ctggacaaaattgacagacgttatgcctgggtgaagcgccagcttgtggactatgaagag
aagtatggtcggatgtttccccgggagtggtacatgacggaaaggatctcagtagaattt
tgccatgtgacgaggacagaactttccaaaatcatgcgagccagagctaaggaaattgaa
gtgaaattgcttctttttgcgattcagagaacaactaactttgagggatttcttgcaaaa
cgcttctccggttgtaccctgacagacggaaccctgaaaaaactggagtccccaccacca
tctaccaatcccttcctggaagaggagacagcaccagagatggaggagctggcgctggag
aaaggggagctagagcagccaaagaagcccaaagccccagataatccatttcatggcatt
gtttccaagtgtttcgagcctcatctctatgtgtacattgagtcccaggacaaaaacctc
agtgaactgatagaccggtttgtggcagatttcaaagcccagggcccaccgaagcctaac
accgatgaagggggtgctgtactccccagctgcgctgacctctttgtctactacaagaag
tgtatggtgcagtgctcacagctcagcactggggagcccatggtcgccctgaccaccatc
ttccagaagtacctccgagaatacgcctggaaaaccctctctggcaacctgcccaagacc
agcagcagcagtgggggactgactatcagcagcctcctcaaagagaaggagggctcggaa
gtggccaggttcaccctggaggaattgtgcctcatctgcagtattcttagcacggctgag
tactgtctggccaccacccagcagctagaagaaaaactcaaagaaaaagttgatgtaagt
ctgactgaacgaattaatctcacaggagaaatggacacattcagcaccgtcatctctagc
agcatccagctgttggttcaggatctggatgcagcctgtgatcctgccctgattgccatg
agcaagatgccatggcagaatgtggagcatgttggtgaccagagcccttatgtcacttcc
gttattcttcacattaagcagaatgtccccatcatccgtgacaacctggcttccacacga
aaatactttacacagttctgcattaaatttgcaaactcattcatccccaaattcatcacc
cacctcttcaagtgcaagccaatcagcatggtgggagcagagcagctgctgctggacacc
cactctctgaagatggtcctgcttgatctcccatccatcggctcacaggtggtgaggaag
gcacctgccagttacactaagattgtcgtgaaaggcatgacccgggctgaaatgatcctc
aaggtagtaatggcccctcatgaaccgttggtagtatttgttgacaactacatcaaactc
cttacggattgcaacacagaaaccttccagaaaatactggacatgaaggggctgaagagg
agcgagcagagcagcatgctggaactttttaggcagaggctccctgccccaccctcaggg
acagaaagttccagcacactgtccctcatggctccaacaccagagcaggaatcatcccgc
atccgaaaacttgagaaactgattaaaaagagactgtaa
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