KEGG   Phodopus roborovskii (desert hamster): 127219023
Entry
127219023         CDS       T08852                                 
Symbol
Grin2c
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob04020  Calcium signaling pathway
prob04024  cAMP signaling pathway
prob04080  Neuroactive ligand-receptor interaction
prob04082  Neuroactive ligand signaling
prob04713  Circadian entrainment
prob04720  Long-term potentiation
prob04724  Glutamatergic synapse
prob05010  Alzheimer disease
prob05014  Amyotrophic lateral sclerosis
prob05017  Spinocerebellar ataxia
prob05020  Prion disease
prob05022  Pathways of neurodegeneration - multiple diseases
prob05030  Cocaine addiction
prob05031  Amphetamine addiction
prob05033  Nicotine addiction
prob05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:prob00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    127219023 (Grin2c)
   04024 cAMP signaling pathway
    127219023 (Grin2c)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    127219023 (Grin2c)
   04082 Neuroactive ligand signaling
    127219023 (Grin2c)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    127219023 (Grin2c)
   04720 Long-term potentiation
    127219023 (Grin2c)
  09159 Environmental adaptation
   04713 Circadian entrainment
    127219023 (Grin2c)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    127219023 (Grin2c)
   05014 Amyotrophic lateral sclerosis
    127219023 (Grin2c)
   05017 Spinocerebellar ataxia
    127219023 (Grin2c)
   05020 Prion disease
    127219023 (Grin2c)
   05022 Pathways of neurodegeneration - multiple diseases
    127219023 (Grin2c)
  09165 Substance dependence
   05030 Cocaine addiction
    127219023 (Grin2c)
   05031 Amphetamine addiction
    127219023 (Grin2c)
   05033 Nicotine addiction
    127219023 (Grin2c)
   05034 Alcoholism
    127219023 (Grin2c)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:prob04040]
    127219023 (Grin2c)
Ion channels [BR:prob04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   127219023 (Grin2c)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd ANF_receptor SBP_bac_3 NMDAR2_C AliA_AliB
Other DBs
NCBI-GeneID: 127219023
NCBI-ProteinID: XP_051036157
UniProt: A0AAU9YNR4
LinkDB
Position
Unknown
AA seq 1237 aa
MGGALGPALLLTSLLGTWAGLGPGHGEQPVMVAVVFSSSGPPQAQAPTRLTAQNFLDLPL
EIQPLTVSINSTNPSSILTQICGLLGAARVHGIVFEDNVDTEAVAQLLDFVSSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGPRARTQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPNLALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYRRQYGTLPAPAGDCRSHPGPVSPARQTFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLYMKYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSSGDVTPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQL
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WKLRHSVPSSPQLDFLLAFSRGIYSCFNGVQSLPSPARPPSPDLTAGSAQVSVLKMLQAA
RDMVNTADMSSSLDRATRTIENWGNNRRAPAPTSSGPRSSTPGPPGQRSPSGWGPPGGGH
TSQTRRAPQPPGRSVTCGPPLPEVSRAPCRHAWDARWPVRVGHPGRHLSASERRALPERP
LLSAHCHYSSFPRAERSGRPFLPLFPEPPEPDDLPLLGPEQLARREALLREAWARGSRPR
HASLPSSVAEAFTRSSPLPARCTGHGCACPCPQSQPSCRHLVQARSMRLPSYREAYVEGI
PAGVATWQPRQHVCLHTHTHLPLCWGPVCRHPLPCANHSPWHIGTWEPPLHRGRTLGLGT
GYRDSGVLEEVRRDAHGTQSFPRSCTWRRISSLESEV
NT seq 3714 nt   +upstreamnt  +downstreamnt
atgggtggggccctagggccggccctgctgctcacttcactcctgggtacctgggcaggg
ttaggcccagggcacggagaacagccagtgatggtggcagtagtgttcagcagctctggg
ccaccacaagcccaggcccctactcgcctcaccgcccagaacttcctggacctgccactg
gagatccagccactcactgtcagcatcaacagcaccaaccccagcagcatcctcacgcaa
atctgcgggcttctgggtgctgcccgtgtccacggcatcgtctttgaggacaacgtagac
accgaggcagtggcccagctactggacttcgtctcctcccagacccacgtgcccatcctc
agcatcagtggaggctctgctgtggtcctcacccccaaggagccaggctccgccttcctg
cagctgggcgtgtccttggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgcgtttgccgtcatcaccagcctgcaccccggccacgcgctcttcctcgag
ggtgtgcgcgccgtcgccgacgccagctatctgagctggcgcctgctggacgtgctcacc
ctggagctgggcccgggcgggccgcgagcgcgcactcagcgcctgctgcgccaggtcgat
gcaccggtgctggtggcctactgctcccgcgaggaggccgaggtgctcttcgctgaggct
gcacaagccggcctggtgggccccggccacgtgtggctggtgcctaacctggcgctgggg
agcaccgacgcacccccggcagccttcccggtgggcctcatcagtgtggtcaccgagagt
tggcgccttagcctgcgccaaaaggtccgcgacggtgtggccatcctggcccttggtgcc
cacagctaccgacgccagtacggtaccctgcctgccccggctggggactgccgaagccac
cccggacctgtcagccctgccaggcagaccttctacaggcacctactgaacgtcacctgg
gagggccgagacttctccttcagccctggtgggtacctggtccagcccaccatggttgtg
atcgccctcaaccgacaccgcctctgggagatggtaggacgctgggatcacggagtccta
tacatgaagtatccagtatggcctcgctacagcacatctctgcagcctgtggtggacagc
cggcacctgacggtggccacattggaagaacggcccttcgtcattgtggagagccctgac
cccggcacaggtggctgtgtacccaacactgtgccctgccgtagacagagcaaccacacc
ttcagcagcggggatgtaaccccctacacgaagctctgttgtaagggtttctgcatcgac
atcctcaaaaagttggccaaggtggtcaagttctcctatgacctgtacctggtgaccaac
ggcaagcatggcaagagggttcgcggtgtgtggaacggcatgatcggggaggtatactac
aagcgggcagacatggccatcggctccctcaccatcaacgaggagcgctctgagattata
gacttctctgtgccttttgtggagaccggcatcagtgtgatggtggctagaagcaatggc
actgtctccccctcagctttcctggagccctacagccctgctgtgtgggtgatgatgttt
gtaatgtgcctcaccgtggttgccatcaccgtcttcatgttcgagtacttcagccctgtc
agctacaaccagaacctcaccaagggcaagaaatctggaggaccgtccttcaccattggc
aaatccgtgtggttgctgtgggcgctggtcttcaacaactctgttcccatcgagaacccc
cggggtaccaccagcaagatcatggtcctggtgtgggctttctttgctgtcatcttcctc
gccagctacacggccaacctggcagccttcatgatccaggagcaatacatcgacactgtg
tcgggccttagtgacaagaagtttcagcggcctcaagatcaatacccgcccttccgcttt
ggcacggtgcccaacggcagcacagagaggaacattcggagcaactaccgtgacatgcac
acccacatggtcaagttcaaccagcgctcggtggaggatgctctcacaagcctcaagatg
gggaagctggatgccttcatctacgatgctgctgtcctcaactacatggcaggcaaggac
gaaggctgcaagctcgtcaccattggatctggcaaggtctttgccaccactggctatggc
attgccatgcagaaagattcccactggaagagggccatagacctggcactcctgcagctc
ctgggggatggagagacccagaagctggagaccgtgtggctctcaggaatctgccagaat
gagaagaatgaggtgatgagcagcaaactggacatcgacaacatggcgggagtcttctac
atgctgctggtggccatggggctggccctgctggtctttgcctgggagcaccttgtctac
tggaaacttcgccactcagtgcccagctcaccccagctggacttcctgctggctttcagc
aggggcatctacagctgcttcaacggggtacagagcctccccagccctgcgcggccgccc
agcccggacctcacagcaggctcagcccaggtcagtgtgttgaagatgctacaggcggct
cgagacatggtgaacactgcggatatgagcagctccctggaccgcgccacacgcaccatc
gagaactggggcaacaaccgccgggcacctgctcccaccagctccggcccgcggtcctcc
accccaggtcctccaggacaaaggagtcccagtggctgggggcctcccggtgggggccac
acatcacaaacgcgcagggccccgcagccccccggccgctccgtgacgtgcgggccacca
ctgcccgaagtgtcccgagcaccctgcaggcacgcttgggatgcgcggtggccggtgcgg
gtcggacacccggggcggcacctctcggcctccgagcggcgcgcgctcccggagcgcccc
ctgctgtccgcgcactgccactacagctccttccctcgagctgagagatccgggcgcccc
ttcctcccgctcttcccggagcccccggagcccgacgacctgccgctgctcgggccggaa
cagctggctcggcgggaggctctgttgcgtgaggcctgggcccggggctcgcgccctcgc
catgcttccctacccagctcggtagcagaagccttcactcgatccagcccgctgcctgcc
aggtgcaccggccatggctgtgcctgtccctgcccccaaagccagccatcctgcaggcac
ttggttcaggcacggtcgatgcggctgccatcctacagggaggcctatgtggagggtata
ccggcaggggtggccacctggcagcccagacagcacgtctgcctgcacacccatacccac
ctgccactctgttgggggcctgtctgtcgtcatcctctaccctgtgccaaccacagcccc
tggcacattggaacgtgggagcctccattacacagaggcaggaccctggggctaggcaca
ggctacagggacagtggggtgctggaagaggtccgcagggacgcccatggaacacaaagt
ttcccaaggtcctgcacctggaggcggatctccagcctggaatcggaagtgtga

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