Phodopus roborovskii (desert hamster): 127219290
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Entry
127219290 CDS
T08852
Symbol
Irf1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04625
C-type lectin receptor signaling pathway
prob04668
TNF signaling pathway
prob04917
Prolactin signaling pathway
prob05133
Pertussis
prob05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
127219290 (Irf1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127219290 (Irf1)
09152 Endocrine system
04917 Prolactin signaling pathway
127219290 (Irf1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
127219290 (Irf1)
09171 Infectious disease: bacterial
05133 Pertussis
127219290 (Irf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127219290 (Irf1)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127219290 (Irf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
127219290
NCBI-ProteinID:
XP_051036650
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MMRRHGPMGARKRPGGGVAESRPGNPAKCLVFSAAPRTRQCALLPRRGRTCSQTQSIRTG
RGEPRSAVSSGPQHPGHPSLCARIAYLHRNPLCRVPCEDRSCCKATMPITRMRMRPWLEM
QINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKIGEKEPDP
KTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQRKERKSKSSRDTKSK
AKRKLCGDASPDTLSDGLSSSTLPDDHSSYTTQGYLGHDLDLEQDLNPALSPCVASSSLP
DWHMQMDIVPDSTSDLYNLQVSPMPSTSEAATDEDEEGKLPEDIVKLFEQSEWQPTNVDG
KGYLLNEPGAQSSSVYGDFSCRDEPEIDSPGGDIGMGIQHVFTDLKNMDSIWMDNLLPPT
VRLSSIQAIPCAP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcggcacggaccaatgggcgcgcgcaagcgtcccggcgggggcgtggccgag
tccaggccggggaatcccgctaagtgtttggttttctccgcggcgccgcggactcgccag
tgcgcgctactccctcgtcgaggcaggacgtgctctcagactcagtcgatccgaaccggc
cgaggcgaaccaaggtcagccgtatccagcggcccccagcatcccgggcatccttcgctc
tgtgcgcgcatcgcgtacctacaccgcaaccctctctgtcgggtaccctgtgaggatcgc
tcctgctgcaaagccaccatgcctatcactcggatgcgaatgagaccctggctagagatg
cagattaattccaatcaaattccggggctgatctggattaataaagaagagatgatcttc
cagatcccatggaaacatgctgccaagcatggctgggacatcaacaaggatgcctgtctg
ttccggagctgggccattcacacaggccgatacaaaataggggaaaaagagccagatccc
aagacatggaaagcaaatttccgttgtgccatgaactccctgccagacattgaggaagtg
aaggaccagagcaggaacaagggcagctcagctgtacgagtgtaccggatgctgccaccc
ctcaccaagaaccagagaaaagagagaaaatccaagtccagccgagacactaagagcaag
gccaagaggaagctatgtggagatgctagccctgacaccctctccgatggactcagcagc
tccacactgcctgatgaccatagcagctacacaactcagggctacctgggtcacgacttg
gacctggagcaggaccttaacccagcactgtcgccgtgtgtcgccagcagcagtctccca
gactggcacatgcagatggacattgtgccagacagtaccagcgatctatataacttgcag
gtgtcgcccatgccctccacctctgaagctgctacagatgaggatgaggaagggaagtta
cccgaggacatcgtgaagctctttgagcagtctgagtggcagccgacaaacgtggatggc
aagggatacttgcttaatgaaccgggagcccagtcctcttctgtctatggagacttcagc
tgcagggacgaaccagagattgacagtcctggaggggacatcgggatgggcatacagcat
gtcttcacggatctgaagaatatggactccatctggatggacaacctgctgccccccact
gtcaggctatcctccatccaagccattccttgtgcaccatag
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