Phodopus roborovskii (desert hamster): 127219387
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Entry
127219387 CDS
T08852
Symbol
Sox30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127219387 (Sox30)
Transcription factors [BR:
prob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127219387 (Sox30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
127219387
NCBI-ProteinID:
XP_051036832
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MERARPEPPPPPRQPPRPTPPRPLRPAPPAQSVEAATFRAAAAERPQSPPVQAAAAIAAV
ASSCGEAAAAGAQAGPRRLLQVKPEQVLLLPPGPLLPQAPDEGATAAAAPSSAQARLLQL
RPELLLLPPQSAADAGPCRPELRPMQPRTLIVKAEKQELGAGLDLSLGSRRTTEAGPRAS
RSAKLDGTGKALDGRRGDEKKAKLEAEEAPRDALKGGEGRNLLAIGEGVIKTEEPDRLRD
DCRLGSEAASNGLVHGSKDAILAQPSSAFGPHQQDLRFPLTLHTVPPGARIQFQGPPPSE
LIRLSKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMN
AFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFP
GWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPGLQNTITHPV
GEAPPAIQLPTPAVQRPSPITLFQPSVSSTGPVAVPPPSLTPRPALPPQRFTGPSQTDVH
RLPSGTSRSVKRPTPVSLESSSRIPAGASTAHARFATSPIQPPKEYASVSTCPRSTPIPP
ATPIPHSHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFP
SSMPECLGYYEDRYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRSCESMDGPPYYNSHGH
SGEEYLSPMPPLDIGALENVFTAPASAPSGVQQVNVTDSDEEEEEKVLRNL
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgccgccgccgccgcgccaaccgccgcggcccacccca
ccgcgcccgttgcgccccgctccgcccgcgcagtccgtcgaggccgccaccttccgggcc
gcggccgccgagcgtcctcagtcgccgccggtccaggccgcggccgccatcgccgcagtg
gcctcgtcgtgcggggaggccgcggcggcgggtgcgcaggccgggccgcggcgtctgctg
caagtgaagccggagcaggtgctgctgctgccacccgggccgctcttaccgcaggctcct
gacgagggtgccaccgccgcggccgccccgtcgtccgcgcaggcgcgcctcctgcagctg
aggcccgagctgctgctgttgccgccgcagtccgcggccgacgcaggcccttgcaggccg
gagctgcgccccatgcagccccggacgctgatcgtcaaggccgagaaacaggagctgggg
gcgggcttggacctgtcgctgggatctcggaggaccaccgaggccggccctagagcctcc
aggtccgccaagttggatggcaccgggaaggccctcgacggccgccgaggggatgagaag
aaagccaagctggaggcagaggaggccccgagggacgcgctgaaaggcggggaaggcagg
aacctgctggccatcggagaaggagtcatcaagaccgaggagccagacagactgagggac
gactgcaggctgggctcggaagccgcgtccaatggcctggtccacggcagcaaggatgct
atcctggcccagccttccagtgcttttgggccgcaccagcaagacctaaggttccctttg
actctccacacggtccctcctggggcccgtatccaatttcaggggcctccgccctctgag
ctgatacggttgtccaaggtccccctgacaccagtgcctattaaaatgcagtccttactg
gagccttctgtaaaaatcgaaaccaaagatgtccccctcaccgtgcttccttcagatgca
ggaatacctgatactcccttcagtaaggacagaaatggtcatgtgaagcgacctatgaat
gcatttatggtttgggcaagaatccaccgaccagctctagccaaagctaacccagccgcc
aacaatgcagaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaa
aagaaaccctattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcct
ggttgggtttatcagcctcgtccagggaagcgaaaacgcttccctctaagtgtttccaat
gtattttctggtactacacagaatattatctctacaaatcctacaacaatttatccttat
cgctcacctacctactctgtggtaatccctggccttcagaacaccatcactcatccagtt
ggtgaagccccacctgctatccagctgcctacacctgcagtccagcgcccaagccccatc
acacttttccagcccagcgtctccagcactggcccggtggccgtcccgcctccaagtctg
acgccccgcccagcactcccacctcagcgctttactgggccttcccaaactgacgttcat
aggcttccttcgggaaccagtcgctctgtgaagagacccactccagtctctctggagagc
tccagcaggattccagctggtgcaagtactgcccatgccagatttgcaacctcacctatc
cagcctcctaaggaatatgccagcgtttccacgtgtcccagaagcactccaattcctcca
gctactcccattccacactctcacgtctaccagcccccgccccttggccatccagccaca
ctgtttgggacgccaccacgattctcgtttcatcacccttacttcctacctggacctcat
tacttcccgtcaagcacatgcccttatagtcggcccccttttggctatggaaattttcca
agttcaatgccagaatgtcttggttattatgaagacaggtaccaaaagcacgaggctata
ttttcagctttaaatagagactatcctttcagagactacccagatgagcacacacacagt
gaagattctcggagctgtgagagcatggatgggcccccctactacaacagccatgggcac
agtggggaagagtacttgagtcccatgcctccactggacattggagccttggagaatgtc
ttcacagccccagcctcagctccctctggcgtccagcaagtcaatgtcactgacagcgac
gaggaggaagaagaaaaagtgctcaggaatttataa
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