Phodopus roborovskii (desert hamster): 127219622
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Entry
127219622 CDS
T08852
Symbol
Mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04120
Ubiquitin mediated proteolysis
prob04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127219622 (Mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127219622 (Mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127219622 (Mgrn1)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127219622 (Mgrn1)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127219622 (Mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
127219622
NCBI-ProteinID:
XP_051037283
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSAGNYFASHFFMGGEKFDTPHPEGYLFGENMD
LNFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGEKPRVLYS
LEFTFDADARVAITIYCQAVEEFLNGMAVYSCKNPSLQSETVHYKRGVSQQFSLPSFKID
FSEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLC
TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPISFSPVLAQSVDHDEHSCPFK
KSKSHPASLASKKPKRETSSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
SDGLSQASCPLAGLDRIIESGLQKGKPQSKSPDSTLRSPSSPIHEEDEEKLSEDSDAPVP
PSGVELALRESSSPESFGTEEVDEPSLKQGSQVPSIDDVLQDGSPQHHGCNQTVPPADIY
LPGWSTSMETPHSLGTTSSPWPLLSGSSSEPGATELTPL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgccgcatcgcgggcgtggaggacatcgacattcaggccaac
tcggcctaccgctatcctccgaagtcggcaggaaactactttgcttcacactttttcatg
ggcggcgagaaatttgacaccccccatcccgaaggttacctctttggagagaacatggat
ctgaacttcctgggcagtcgtccagtccagtttccctatgtcacccctgctccccacgag
ccagtaaaaaccttgaggagcctggtgaacatccgcaaagactcactccgacttgtgagg
tacaaagacgatgcagacagccctacagaggatggtgagaagccccgtgtgctctacagt
ttggaattcacctttgatgccgatgcccgtgtggctattaccatttattgtcaggcagta
gaggagttcttgaacggcatggcagtgtacagctgtaagaatccttctctgcagtctgag
actgtccactacaagaggggcgttagccagcagttctccctgccttctttcaagattgac
ttctccgagtggaaggatgatgagctgaactttgatctggatcggggtgtgtttccagta
gtcatacaggctgtggtggatgaaggagatgttgtggaagtgacaggccatgctcatgtg
ctgttggctgcctttgagaagcatgtggatggcagtttctccgtgaagccattaaagcag
aagcaaattgtggatcgtgtcagctacctgttgcaggagatctacggaatcgagaataag
aacaaccaagagaccaagccatctgatgacgagaacagtgacaacagcagtgaatgtgtg
gtgtgcctgtcagacctgagggacacgctgatcctgccctgccgccacctgtgcctctgt
acttcctgtgctgacacgttgcggtaccaggccaacaattgccccatctgccggctgcca
ttccgagctctcctgcagatccgggctgttcggaagaagccaggggccctgtctcccatc
tctttcagccctgtcttggcccagagtgtggaccatgatgagcactcttgtccctttaaa
aaatcaaagtcgcaccctgcctccctggccagcaagaaacctaaaagggaaacaagttct
gacagtgtcccacctggctatgagcccatctccttgcttgaggcactcaatggtctacgg
gctgtctccccagctatcccatcagcccccctctatgaggaaatcacctactcaggcatc
tctgatggtctgtcccaggccagttgtcctcttgctggactcgatcgaatcatagaaagt
ggcctacagaagggcaagccacagagcaagtctccagacagcaccctgcggtctccatca
tcccccatccatgaggaggatgaggagaagctttctgaggactctgatgctcctgtccca
ccaagtggtgtggagcttgcactgagggagagcagctcccctgagagtttcggaacagaa
gaggtggatgaaccgtcactcaagcaagggagccaagtgccctctattgatgatgtcctg
caggatggcagcccccaacaccatggttgcaaccagactgtccctcctgccgacatttac
ctaccaggatggtccacctccatggagacgccacacagccttggcaccaccagctccccc
tggcctctgctgagtggctctagttctgagcctggagctactgagctgaccccactctga
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integrated database retrieval system
