Phodopus roborovskii (desert hamster): 127219999
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Entry
127219999 CDS
T08852
Symbol
Ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127219999 (Ddx1)
03016 Transfer RNA biogenesis [BR:
prob03016
]
127219999 (Ddx1)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127219999 (Ddx1)
Spliceosome [BR:
prob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127219999 (Ddx1)
Transfer RNA biogenesis [BR:
prob03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
127219999 (Ddx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
127219999
NCBI-ProteinID:
XP_051037601
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGLLKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVGLAKAPDSYIVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRMHGQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctccgagatgggtgttatgcctgaaattgcacaagctgtggaagagatg
gattggcttctaccaactgatatccaggcagaatctatcccgttgatcctaggaggaggt
gatgtacttatggcagcagaaacaggaagtggaaaaactggtgcttttagtattccagtt
atccagattgtatatgagactctgaaagaccaacaggaaggaaagaaagggaaaactact
atcaaaaccggtgcttcagtgctcaacaaatggcagatgaacccgtatgacagagggtct
gcttttgcaattgggtcggatggcctgtgttgtcagagcagagaagtgaaggaatggcat
gggtgcagagcgaccagaggactgctgaaagggaaacactactatgaggtatcctgtcat
gaccaagggctttgcagagtcgggtggtctaccatgcaggcctccttagacctaggtact
gacaagtttggatttggcttcggtggaacaggaaagaaatctcataataaacagttcgat
aattatggagaggaattcactatgcacgatacaattggctgctacttagatattgataaa
gggcatgtgaagttctctaagaatggaaaagaccttggtcttgcatttgaaataccagca
catataaaaaaccaagccctcttccccgcctgtgttttgaagaatgctgagttgaaattt
aactttggtgaagaagaatttaagtttccaccaaaagatggttttgttggtcttgccaag
gccccagatagttacatcgtcaagtcgcaacacacaggtaatgcacaggtatcacaaaca
aaatttctccctaatgctccaaaagctctcattgtggaaccctccagggagctagctgag
caaaccttgaacaacgtcaagcagtttaagaagtatattgataaccctaagttacgggag
cttctcatcatcggaggtgttgcagctcgggatcaactctctgttttggataatggggtt
gatatcgtcgttggtacgccgggaagattagatgatttggtatcaacaggcaagctcaac
ttgtctcaagtcagattcttggtgctggacgaagctgatgggcttctctctcaaggttat
tctgactttatcaacaggatgcatggtcagattcctcagattacttctgatgggaaaaga
cttcaggtgattgtttgctctgccactttgcattctttcgatgtaaagaagctatctgag
aagataatgcattttcccacatgggtagatttgaaaggggaagactctgttccagatact
gtgcaccatgttgttgtccctgtcaatcctaaaactgacaagctttgggaacggctgggg
aagaaccacattcgaactgatgatgtgcatgcaaaagataatacaagacccggtgctaac
agtccagagatgtggtctgaagctattaaaatacttaagggggaatatgctgtccgagca
atcaaggaacacaagatggatcaagcaattatcttctgtagaactaaaattgactgtgat
aacttggagcagtactttatgcaacaaggaggaggacctgataaaaagggacaccagttc
tcatgtgtgtgtcttcacggtgacaggaagcctcatgagagaaagcagaacttggaaaga
tttaagaaaggagacgtaaggttcctgatttgcacagatgtagctgctagaggaattgac
atccacggtgtcccatatgttataaacgtcaccctgcctgatgagaagcagaactacgtg
caccgaattggcagagtggggcgagctgaaaggatgggcctggccatttccctggtggca
acagaaaaagaaaaggtttggtatcatgtgtgcagcaaccgtgggaaaggatgctataac
acgagattaaaggaagatggtggctgtaccatctggtacaatgaaatgcagctgctttcc
gagatagaagagcacctgaactgcaccatttcccaggttgaaccagatataaaggtccca
gtggatgagtttgatgggaaagttacatatgggcaaaagagggctgctggtggtggaaac
tataaaggccatgtggatatcctggcacctaccgttcaggagttggccgcccttgaaaag
gaagcacagacatctttcctgcaccttggctaccttcccaaccagctgttcagaaccttc
tga
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